RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 GAPTQ8N292 157 aa16.85■□□□□ 0.29
RTN1-202ENST00000342503 OR11L1Q8NGX0 322 aa16.85■□□□□ 0.29
RTN1-202ENST00000342503 RTN4IP1Q8WWV3 396 aaPredicted RBP16.85■□□□□ 0.29
RTN1-202ENST00000342503 NMES1Q9C002 83 aa16.85■□□□□ 0.29
RTN1-202ENST00000342503 METTL8Q9H825 291 aaKnown RBP16.85■□□□□ 0.29
RTN1-202ENST00000342503 DPRXA6NFQ7 191 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 POM121CA8CG34 1229 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 M0R233 179 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 SPRY3O43610 288 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 PSPNO60542 156 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 TUSC2O75896 110 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 TFF1P04155 84 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 SLC25A4P12235 298 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 C4BPBP20851 252 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 LMO1P25800 156 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 CASP6P55212 293 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 C11orf87Q6NUJ2 197 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 PCSK4Q6UW60 755 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 TEX261Q6UWH6 196 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 TMUB2Q71RG4 321 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 MOB1BQ7L9L4 216 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 NUP37Q8NFH4 326 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 MEGF10Q96KG7 1140 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 U3KQ87 197 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 CADP27708 2225 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 MPTX1A8MV57 137 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 HOXB5P09067 269 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 SMIM21Q3B7S5 101 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 PRR7Q8TB68 274 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 ZCCHC14Q8WYQ9 949 aaKnown RBP16.84■□□□□ 0.29
RTN1-202ENST00000342503 OR2V2Q96R30 315 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 CABLES2Q9BTV7 478 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 TRAPPC2LQ9UL33 140 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 PCDHB10Q9UN67 800 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 KCNIP3Q9Y2W7 256 aa16.84■□□□□ 0.29
RTN1-202ENST00000342503 ABCD4O14678 606 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 OR5AC1P0C628 307 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 RPA2P15927 270 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 EGR1P18146 543 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 S100A11P31949 105 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 CA7P43166 264 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 KCNJ3P48549 501 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 SELENOVP59797 346 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 TMEM187Q14656 261 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 SP6Q3SY56 376 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 TMEM65Q6PI78 240 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 UNQ6494/PRO21346Q6UXR6 183 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 ZNF546Q86UE3 836 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 CCDC71LQ8N9Z2 235 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 ST6GALNAC3Q8NDV1 305 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 OR10Z1Q8NGY1 313 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 SECTM1Q8WVN6 248 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 MRPL24Q96A35 216 aaKnown RBP16.83■□□□□ 0.28
RTN1-202ENST00000342503 GALNT14Q96FL9 552 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 KIRREL1Q96J84 757 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 OR10C1Q96KK4 312 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 MFFQ9GZY8 342 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 ITGB1BP2Q9UKP3 347 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 WIPI2Q9Y4P8 454 aa16.83■□□□□ 0.28
RTN1-202ENST00000342503 TRBV6-7A0A0A0MS04 114 aa16.82■□□□□ 0.28
RTN1-202ENST00000342503 IGKV1D-13A0A0B4J2D9 117 aa16.82■□□□□ 0.28
RTN1-202ENST00000342503 IGKV1-13P0DP09 117 aa16.82■□□□□ 0.28
RTN1-202ENST00000342503 GNRHRP30968 328 aa16.82■□□□□ 0.28
RTN1-202ENST00000342503 CYCSP99999 105 aaKnown RBP16.82■□□□□ 0.28
RTN1-202ENST00000342503 SSX8Q7RTT4 187 aa16.82■□□□□ 0.28
RTN1-202ENST00000342503 MOGAT3Q86VF5 341 aa16.82■□□□□ 0.28
RTN1-202ENST00000342503 ZNF565Q8N9K5 539 aa16.82■□□□□ 0.28
RTN1-202ENST00000342503 ZNF680Q8NEM1 530 aa16.82■□□□□ 0.28
RTN1-202ENST00000342503 ITLN1Q8WWA0 313 aa16.82■□□□□ 0.28
RTN1-202ENST00000342503 METRNQ9UJH8 293 aa16.82■□□□□ 0.28
RTN1-202ENST00000342503 ATXN7O15265 892 aaPredicted RBP16.82■□□□□ 0.28
RTN1-202ENST00000342503 PSMB6P28072 239 aa16.82■□□□□ 0.28
RTN1-202ENST00000342503 BSPH1Q075Z2 132 aa16.82■□□□□ 0.28
RTN1-202ENST00000342503 OR10J5Q8NHC4 309 aa16.82■□□□□ 0.28
RTN1-202ENST00000342503 C2orf50Q96LR7 162 aa16.82■□□□□ 0.28
RTN1-202ENST00000342503 WFIKKN1Q96NZ8 548 aa16.82■□□□□ 0.28
RTN1-202ENST00000342503 SLC5A7Q9GZV3 580 aa16.82■□□□□ 0.28
RTN1-202ENST00000342503 MBNL3Q9NUK0 354 aaKnown RBP16.82■□□□□ 0.28
RTN1-202ENST00000342503 MAP1BP46821 2468 aaKnown RBP16.81■□□□□ 0.28
RTN1-202ENST00000342503 TMEM30CPA0ZSE6 113 aa16.81■□□□□ 0.28
RTN1-202ENST00000342503 SRRM5B3KS81 715 aa16.81■□□□□ 0.28
RTN1-202ENST00000342503 IFNL4K9M1U5 179 aa16.81■□□□□ 0.28
RTN1-202ENST00000342503 HTR2BP41595 481 aa16.81■□□□□ 0.28
RTN1-202ENST00000342503 COL10A1Q03692 680 aa16.81■□□□□ 0.28
RTN1-202ENST00000342503 H1FOOQ8IZA3 346 aaPredicted RBP16.81■□□□□ 0.28
RTN1-202ENST00000342503 THAP6Q8TBB0 222 aa16.81■□□□□ 0.28
RTN1-202ENST00000342503 IL1F10Q8WWZ1 152 aa16.81■□□□□ 0.28
RTN1-202ENST00000342503 SUCNR1Q9BXA5 334 aa16.81■□□□□ 0.28
RTN1-202ENST00000342503 ARL6Q9H0F7 186 aa16.81■□□□□ 0.28
RTN1-202ENST00000342503 TNFSF18Q9UNG2 199 aa16.81■□□□□ 0.28
RTN1-202ENST00000342503 TLN1Q9Y490 2541 aaKnown RBP16.81■□□□□ 0.28
RTN1-202ENST00000342503 CFHR2P36980 270 aa16.8■□□□□ 0.28
RTN1-202ENST00000342503 OR3A1P47881 315 aa16.8■□□□□ 0.28
RTN1-202ENST00000342503 AP2S1P53680 142 aaPredicted RBP16.8■□□□□ 0.28
RTN1-202ENST00000342503 HMGN3Q15651 99 aa16.8■□□□□ 0.28
RTN1-202ENST00000342503 SLC35E4Q6ICL7 350 aa16.8■□□□□ 0.28
RTN1-202ENST00000342503 ZNF818PQ6ZRF7 136 aa16.8■□□□□ 0.28
RTN1-202ENST00000342503 FAM185AQ8N0U4 392 aa16.8■□□□□ 0.28
RTN1-202ENST00000342503 PRR18Q8N4B5 295 aa16.8■□□□□ 0.28
RTN1-202ENST00000342503 CD177Q8N6Q3 437 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms