RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 GPR35Q9HC97 309 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 GSN-AS1Q9NRJ2 163 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 DUSP13Q9UII6 198 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 DEDDO75618 318 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 CTSDP07339 412 aaPredicted RBP10.83□□□□□ -0.68
LMX1A-202ENST00000342310 FOSL1P15407 271 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 HNF1AP20823 631 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 ATP6V0CP27449 155 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 FAM27BQ5VT28 67 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 LIAT1Q6ZQX7 453 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 CRIM1Q9NZV1 1036 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 MPPED1O15442 326 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 PRF1P14222 555 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 MMP9P14780 707 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 FABP4P15090 132 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 DVL1P1P54792 670 aaPredicted RBP10.83□□□□□ -0.68
LMX1A-202ENST00000342310 NKX6-1P78426 367 aaPredicted RBP10.83□□□□□ -0.68
LMX1A-202ENST00000342310 SPEM2Q0P670 501 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 CLN3Q13286 438 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 LHFPL2Q6ZUX7 228 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 OR10J5Q8NHC4 309 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 ADAMTS17Q8TE56 1095 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 CT55Q8WUE5 264 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 HIST1H2BAQ96A08 127 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 SPSB1Q96BD6 273 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 POM121Q96HA1 1249 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 SIGLEC12Q96PQ1 595 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 WNT5BQ9H1J7 359 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 HSF4Q9ULV5 492 aa10.83□□□□□ -0.68
LMX1A-202ENST00000342310 CEBPZOSA8MTT3 80 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 K7ESF4 209 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 LILRA1O75019 489 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 IFNA17P01571 189 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 DEFA4P12838 97 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 SULT1A1P50225 295 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 DUSP3P51452 185 aaPredicted RBP10.82□□□□□ -0.68
LMX1A-202ENST00000342310 FUT6P51993 359 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 PCBD1P61457 104 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 B2MP61769 119 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 EWSR1Q01844 656 aaKnown RBP eCLIP10.82□□□□□ -0.68
LMX1A-202ENST00000342310 HIST2H3PS2Q5TEC6 136 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 UQCC3Q6UW78 93 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 ZNF818PQ6ZRF7 136 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 OR10V1Q8NGI7 309 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 RPUSD4Q96CM3 377 aaKnown RBP10.82□□□□□ -0.68
LMX1A-202ENST00000342310 NTNG2Q96CW9 530 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 SEC11CQ9BY50 192 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 TREM2Q9NZC2 230 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 B4GALT7Q9UBV7 327 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 SH3BGRL2Q9UJC5 107 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 MAP1AP78559 2803 aaPredicted RBP10.82□□□□□ -0.68
LMX1A-202ENST00000342310 IGKV1D-13A0A0B4J2D9 117 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 CDIPTO14735 213 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 PHOX2AO14813 284 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 DEGS1O15121 323 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 RHBDL1O75783 438 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 IGKV1-13P0DP09 117 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 RHEBQ15382 184 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 CYB5R2Q6BCY4 276 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 C6orf15Q6UXA7 325 aaPredicted RBP10.82□□□□□ -0.68
LMX1A-202ENST00000342310 BTNL3Q6UXE8 466 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 MEGF10Q96KG7 1140 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 IL17BQ9UHF5 180 aa10.82□□□□□ -0.68
LMX1A-202ENST00000342310 BOKQ9UMX3 212 aaPredicted RBP10.82□□□□□ -0.68
LMX1A-202ENST00000342310 FAM157CP0CG43 387 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 ALDH3B1P43353 468 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 GABRA2P47869 451 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 CCL11P51671 97 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 ERVS71-1P61550 626 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 HABP2Q14520 560 aaPredicted RBP10.81□□□□□ -0.68
LMX1A-202ENST00000342310 OR1C1Q15619 314 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 FAM53AQ6NSI3 398 aaPredicted RBP10.81□□□□□ -0.68
LMX1A-202ENST00000342310 ZDHHC23Q8IYP9 409 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 MED12LQ86YW9 2145 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 OR6C6A6NF89 314 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 CRYM-AS1A6NIL9 109 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 CHATP28329 748 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 ZNF528Q3MIS6 628 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 MRPL14Q6P1L8 145 aaKnown RBP10.81□□□□□ -0.68
LMX1A-202ENST00000342310 ZNF826PQ6ZT77 177 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 TIPARPQ7Z3E1 657 aaKnown RBP10.81□□□□□ -0.68
LMX1A-202ENST00000342310 ZNF561Q8N587 486 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 NABP1Q96AH0 204 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 AQP10Q96PS8 301 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 CACNG5Q9UF02 275 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 PSG2P11465 335 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 RAB5AP20339 215 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 UBE2NP61088 152 aaKnown RBP10.81□□□□□ -0.68
LMX1A-202ENST00000342310 TGFBR3Q03167 851 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 BATFQ16520 125 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 WFIKKN1Q96NZ8 548 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 CDX2Q99626 313 aaPredicted RBP10.81□□□□□ -0.68
LMX1A-202ENST00000342310 ABI3Q9P2A4 366 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 DNAJB11Q9UBS4 358 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 PRSS50Q9UI38 385 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 KPTNQ9Y664 436 aa10.81□□□□□ -0.68
LMX1A-202ENST00000342310 IL11RAQ14626 422 aa10.8□□□□□ -0.68
LMX1A-202ENST00000342310 IL34Q6ZMJ4 242 aa10.8□□□□□ -0.68
LMX1A-202ENST00000342310 CREBBPQ92793 2442 aa10.8□□□□□ -0.68
LMX1A-202ENST00000342310 IGLV3-12A0A075B6K2 115 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms