RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 RNF2Q99496 336 aa16.02■□□□□ 0.16
SMPD1-201ENST00000342245 PARD6GQ9BYG4 376 aaPredicted RBP16.02■□□□□ 0.16
SMPD1-201ENST00000342245 RNF115Q9Y4L5 304 aa16.02■□□□□ 0.16
SMPD1-201ENST00000342245 PDE4DIPQ5VU43 2346 aa16.02■□□□□ 0.15
SMPD1-201ENST00000342245 PRRT4C9JH25 899 aa16.02■□□□□ 0.15
SMPD1-201ENST00000342245 ZNF17P17021 662 aa16.02■□□□□ 0.15
SMPD1-201ENST00000342245 GCH1P30793 250 aa16.02■□□□□ 0.15
SMPD1-201ENST00000342245 FOXL1Q12952 345 aa16.02■□□□□ 0.15
SMPD1-201ENST00000342245 ZNF726P1Q15940 193 aa16.02■□□□□ 0.15
SMPD1-201ENST00000342245 EXT1Q16394 746 aa16.02■□□□□ 0.15
SMPD1-201ENST00000342245 ZBP1Q9H171 429 aa16.02■□□□□ 0.15
SMPD1-201ENST00000342245 PRTFDC1Q9NRG1 225 aa16.02■□□□□ 0.15
SMPD1-201ENST00000342245 UBE2J1Q9Y385 318 aaPredicted RBP16.02■□□□□ 0.15
SMPD1-201ENST00000342245 CBY3A6NI87 242 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 GYPAP02724 150 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 C1QL2Q7Z5L3 287 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 TMEM144Q7Z5S9 345 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 VN1R17PQ8TDU5 208 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 ELSPBP1Q96BH3 223 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 Q96M66 194 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 LRRC3BQ96PB8 259 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 VPS25Q9BRG1 176 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 CSTL1Q9H114 145 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 PARLQ9H300 379 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 MUC22E2RYF6 1773 aaPredicted RBP16.01■□□□□ 0.15
SMPD1-201ENST00000342245 A0A0U1RQK1 487 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 ZNF320A2RRD8 509 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 A6NCN8 305 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 NUPR1O60356 82 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 YPEL3P61236 119 aaPredicted RBP16.01■□□□□ 0.15
SMPD1-201ENST00000342245 SUMO1P63165 101 aaKnown RBP16.01■□□□□ 0.15
SMPD1-201ENST00000342245 CXorf66Q5JRM2 361 aaPredicted RBP16.01■□□□□ 0.15
SMPD1-201ENST00000342245 LILRA6Q6PI73 481 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 FAM57BQ71RH2 274 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 OR4C5Q8NGB2 326 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 RPUSD4Q96CM3 377 aaKnown RBP16.01■□□□□ 0.15
SMPD1-201ENST00000342245 CFHR5Q9BXR6 569 aa16.01■□□□□ 0.15
SMPD1-201ENST00000342245 RYDENQ9NUL5 291 aaKnown RBP16.01■□□□□ 0.15
SMPD1-201ENST00000342245 FAM166BA8MTA8 275 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 TGFBR3LH3BV60 316 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 WASP42768 502 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 HNRNPA3P51991 378 aaKnown RBP16■□□□□ 0.15
SMPD1-201ENST00000342245 LRP11Q86VZ4 500 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 HSPB9Q9BQS6 159 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 HCFC2Q9Y5Z7 792 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 SHISA7A6NL88 538 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 CHST1O43916 411 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 OR2J2O76002 312 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 VDAC1P21796 283 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 CTRLP40313 264 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 BLKP51451 505 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 FGF8P55075 233 aaPredicted RBP16■□□□□ 0.15
SMPD1-201ENST00000342245 ZNF121P58317 390 aaPredicted RBP16■□□□□ 0.15
SMPD1-201ENST00000342245 MSMO1Q15800 293 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 FBLN7Q53RD9 439 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 KMT5CQ86Y97 462 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 SELENOHQ8IZQ5 122 aaKnown RBP16■□□□□ 0.15
SMPD1-201ENST00000342245 METTL27Q8N6F8 245 aaPredicted RBP16■□□□□ 0.15
SMPD1-201ENST00000342245 KLHDC1Q8N7A1 406 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 PP6455Q8WZ26 134 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 SIGLEC12Q96PQ1 595 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 HDHD3Q9BSH5 251 aaPredicted RBP16■□□□□ 0.15
SMPD1-201ENST00000342245 RNF208Q9H0X6 261 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 BET1LQ9NYM9 111 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 TBC1D29Q9UFV1 150 aa16■□□□□ 0.15
SMPD1-201ENST00000342245 TMEM131Q92545 1883 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 ARID1AO14497 2285 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 A0A1W2PQD3 144 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 TMEM238C9JI98 176 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 ADAM20O43506 726 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 TIAF1O95411 115 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 NUDT14O95848 222 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 IGHEP01854 428 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 ACRP10323 421 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 OR8B8Q15620 311 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 CLEC12BQ2HXU8 276 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 OR11L1Q8NGX0 322 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 MRPL30Q8TCC3 161 aaKnown RBP15.99■□□□□ 0.15
SMPD1-201ENST00000342245 TBX21Q9UL17 535 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 TRAV30A0A087WSZ9 112 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 CCDC85CA6NKD9 419 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 TNFRSF10CO14798 259 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 GLI4P10075 376 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 RPL19P84098 196 aaKnown RBP15.99■□□□□ 0.15
SMPD1-201ENST00000342245 RTP5Q14D33 572 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 RAB40CQ96S21 281 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 SLC39A9Q9NUM3 307 aa15.99■□□□□ 0.15
SMPD1-201ENST00000342245 IGHV2OR16-5A0A0B4J2B6 119 aa15.98■□□□□ 0.15
SMPD1-201ENST00000342245 NDUFS8O00217 210 aa15.98■□□□□ 0.15
SMPD1-201ENST00000342245 HS3ST1O14792 307 aa15.98■□□□□ 0.15
SMPD1-201ENST00000342245 TMEM50AO95807 157 aa15.98■□□□□ 0.15
SMPD1-201ENST00000342245 OR1D4P47884 311 aa15.98■□□□□ 0.15
SMPD1-201ENST00000342245 FAM78BQ5VT40 261 aa15.98■□□□□ 0.15
SMPD1-201ENST00000342245 UEVLDQ8IX04 471 aa15.98■□□□□ 0.15
SMPD1-201ENST00000342245 C1orf174Q8IYL3 243 aa15.98■□□□□ 0.15
SMPD1-201ENST00000342245 LHX4Q969G2 390 aa15.98■□□□□ 0.15
SMPD1-201ENST00000342245 TXN2Q99757 166 aa15.98■□□□□ 0.15
SMPD1-201ENST00000342245 CDC42EP3Q9UKI2 254 aa15.98■□□□□ 0.15
SMPD1-201ENST00000342245 ST3GAL6Q9Y274 331 aa15.98■□□□□ 0.15
SMPD1-201ENST00000342245 WDR1O75083 606 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms