RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 MPV17LQ2QL34 196 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 Q8NA96 180 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 MBD3L2Q8NHZ7 208 aaPredicted RBP12.79□□□□□ -0.36
TPM3-208ENST00000341485 BCL2L2Q92843 193 aaPredicted RBP12.79□□□□□ -0.36
TPM3-208ENST00000341485 ZNF488Q96MN9 340 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 HIST1H2AAQ96QV6 131 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 TSNAXQ99598 290 aaKnown RBP12.79□□□□□ -0.36
TPM3-208ENST00000341485 OR51B6Q9H340 312 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 FBXO9Q9UK97 447 aaPredicted RBP12.79□□□□□ -0.36
TPM3-208ENST00000341485 MED6O75586 246 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 JTBO76095 146 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 PRKACAP17612 351 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 IGHV1-2P23083 117 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 KCNJ3P48549 501 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 GUCA2BQ16661 112 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 C10orf91Q5T1B1 145 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 HAGHLQ6PII5 290 aaPredicted RBP12.79□□□□□ -0.36
TPM3-208ENST00000341485 MEX3BQ6ZN04 569 aaKnown RBP12.79□□□□□ -0.36
TPM3-208ENST00000341485 Q6ZT83 130 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 LDLRAD3Q86YD5 345 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 SLC35G3Q8N808 338 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 FAM57AQ8TBR7 257 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 PROCRQ9UNN8 238 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 C3orf85A0A1B0GTC6 90 aa12.78□□□□□ -0.36
TPM3-208ENST00000341485 C3orf80F5H4A9 247 aa12.78□□□□□ -0.36
TPM3-208ENST00000341485 TPD52L2O43399 206 aaKnown RBP12.78□□□□□ -0.36
TPM3-208ENST00000341485 CNOT4O95628 575 aaKnown RBP12.78□□□□□ -0.36
TPM3-208ENST00000341485 UBE2NP61088 152 aaKnown RBP12.78□□□□□ -0.36
TPM3-208ENST00000341485 ZNF324BQ6AW86 544 aaPredicted RBP12.78□□□□□ -0.36
TPM3-208ENST00000341485 FBXW12Q6X9E4 464 aa12.78□□□□□ -0.36
TPM3-208ENST00000341485 MDP1Q86V88 176 aa12.78□□□□□ -0.36
TPM3-208ENST00000341485 PUSL1Q8N0Z8 303 aaKnown RBP12.78□□□□□ -0.36
TPM3-208ENST00000341485 OR4D5Q8NGN0 318 aa12.78□□□□□ -0.36
TPM3-208ENST00000341485 WFDC1Q9HC57 220 aa12.78□□□□□ -0.36
TPM3-208ENST00000341485 TREM1Q9NP99 234 aa12.78□□□□□ -0.36
TPM3-208ENST00000341485 IGKV1-6A0A0C4DH72 117 aa12.77□□□□□ -0.36
TPM3-208ENST00000341485 ANKRD30BLA7E2S9 258 aa12.77□□□□□ -0.36
TPM3-208ENST00000341485 GPR137BO60478 399 aa12.77□□□□□ -0.36
TPM3-208ENST00000341485 LYZL6O75951 148 aa12.77□□□□□ -0.36
TPM3-208ENST00000341485 TK1P04183 234 aa12.77□□□□□ -0.36
TPM3-208ENST00000341485 BTNL8Q6UX41 500 aa12.77□□□□□ -0.36
TPM3-208ENST00000341485 SEM1Q6ZVN7 128 aa12.77□□□□□ -0.36
TPM3-208ENST00000341485 TBC1D26Q86UD7 250 aa12.77□□□□□ -0.36
TPM3-208ENST00000341485 FAM185AQ8N0U4 392 aa12.77□□□□□ -0.36
TPM3-208ENST00000341485 UBAC2Q8NBM4 344 aa12.77□□□□□ -0.36
TPM3-208ENST00000341485 DMBX1Q8NFW5 382 aa12.77□□□□□ -0.36
TPM3-208ENST00000341485 NEK7Q8TDX7 302 aa12.77□□□□□ -0.36
TPM3-208ENST00000341485 SECTM1Q8WVN6 248 aa12.77□□□□□ -0.36
TPM3-208ENST00000341485 USB1Q9BQ65 265 aaKnown RBP12.77□□□□□ -0.36
TPM3-208ENST00000341485 ARV1Q9H2C2 271 aa12.77□□□□□ -0.36
TPM3-208ENST00000341485 RHOFQ9HBH0 211 aa12.77□□□□□ -0.36
TPM3-208ENST00000341485 RCL1Q9Y2P8 373 aaKnown RBP12.77□□□□□ -0.36
TPM3-208ENST00000341485 CARHSP1Q9Y2V2 147 aaKnown RBP12.77□□□□□ -0.36
TPM3-208ENST00000341485 FAM96BQ9Y3D0 163 aa12.77□□□□□ -0.36
TPM3-208ENST00000341485 TMED3Q9Y3Q3 217 aa12.77□□□□□ -0.36
TPM3-208ENST00000341485 IGKV1D-13A0A0B4J2D9 117 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 TRDCB7Z8K6 153 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 F8W036 122 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 TUSC2O75896 110 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 GLAP06280 429 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 IGKV1-13P0DP09 117 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 MUC1P15941 1255 aaPredicted RBP12.77□□□□□ -0.37
TPM3-208ENST00000341485 HOXC12P31275 282 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 CAV2P51636 162 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 RND3P61587 244 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 BLOC1S1P78537 153 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 IL13RA2Q14627 380 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 IGFBP7Q16270 282 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 ZNF818PQ6ZRF7 136 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 SVBPQ8N300 66 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 SUMF2Q8NBJ7 301 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 TMEM222Q9H0R3 208 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 PLSCR4Q9NRQ2 329 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 UQCC1Q9NVA1 299 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 FAM215AQ9Y5M1 114 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 MPC1Q9Y5U8 109 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 ESPL1Q14674 2120 aa12.77□□□□□ -0.37
TPM3-208ENST00000341485 NKX2-6A6NCS4 301 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 ST8SIA3O43173 380 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 TNFSF13O75888 250 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 P2RY1P47900 373 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 TDGF1P3P51864 188 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 GNG3P63215 75 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 EIF2S3LQ2VIR3 472 aaKnown RBP12.76□□□□□ -0.37
TPM3-208ENST00000341485 SPATA46Q5T0L3 261 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 OR2T2Q6IF00 324 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 UNQ6494/PRO21346Q6UXR6 183 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 GFRALQ6UXV0 394 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 MRPL30Q8TCC3 161 aaKnown RBP12.76□□□□□ -0.37
TPM3-208ENST00000341485 ADAT1Q9BUB4 502 aaKnown RBP12.76□□□□□ -0.37
TPM3-208ENST00000341485 TLNRD1Q9H1K6 362 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 ZFP57Q9NU63 452 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 POMT1Q9Y6A1 747 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 KIR2DS1A0A191URI9 304 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 OR5B21A6NL26 309 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 PRRG2O14669 202 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 KIR2DS4P43632 304 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 SRPXP78539 464 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 GTF3C1Q12789 2109 aa12.76□□□□□ -0.37
TPM3-208ENST00000341485 KIR2DS1Q14954 304 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms