RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 STX19Q8N4C7 294 aa16.18■□□□□ 0.18
SYNE2-201ENST00000341472 OR13A1Q8NGR1 328 aa16.18■□□□□ 0.18
SYNE2-201ENST00000341472 CAPSLQ8WWF8 208 aa16.18■□□□□ 0.18
SYNE2-201ENST00000341472 DPCDQ9BVM2 203 aaPredicted RBP16.18■□□□□ 0.18
SYNE2-201ENST00000341472 YTHDF1Q9BYJ9 559 aaKnown RBP16.18■□□□□ 0.18
SYNE2-201ENST00000341472 PLCXD1Q9NUJ7 323 aa16.18■□□□□ 0.18
SYNE2-201ENST00000341472 CALYQ9NYX4 217 aa16.18■□□□□ 0.18
SYNE2-201ENST00000341472 XPNPEP2O43895 674 aa16.17■□□□□ 0.18
SYNE2-201ENST00000341472 ZNF780AO75290 641 aaPredicted RBP16.17■□□□□ 0.18
SYNE2-201ENST00000341472 OR7C1O76099 320 aaPredicted RBP16.17■□□□□ 0.18
SYNE2-201ENST00000341472 CD24P25063 80 aa16.17■□□□□ 0.18
SYNE2-201ENST00000341472 TAS2R43P59537 309 aa16.17■□□□□ 0.18
SYNE2-201ENST00000341472 RPS11P62280 158 aaKnown RBP eCLIP16.17■□□□□ 0.18
SYNE2-201ENST00000341472 HLA-DRB5Q30154 266 aa16.17■□□□□ 0.18
SYNE2-201ENST00000341472 NHLRC3Q5JS37 347 aa16.17■□□□□ 0.18
SYNE2-201ENST00000341472 TPTE2P1Q5T6R2 138 aa16.17■□□□□ 0.18
SYNE2-201ENST00000341472 RSBN1Q5VWQ0 802 aaPredicted RBP16.17■□□□□ 0.18
SYNE2-201ENST00000341472 LAIR2Q6ISS4 152 aa16.17■□□□□ 0.18
SYNE2-201ENST00000341472 SUMF2Q8NBJ7 301 aa16.17■□□□□ 0.18
SYNE2-201ENST00000341472 BPIFB6Q8NFQ5 453 aa16.17■□□□□ 0.18
SYNE2-201ENST00000341472 OR9G1Q8NH87 305 aa16.17■□□□□ 0.18
SYNE2-201ENST00000341472 KIRREL1Q96J84 757 aa16.17■□□□□ 0.18
SYNE2-201ENST00000341472 AKR1E2Q96JD6 320 aa16.17■□□□□ 0.18
SYNE2-201ENST00000341472 OR5M11Q96RB7 305 aa16.17■□□□□ 0.18
SYNE2-201ENST00000341472 IFT22Q9H7X7 185 aa16.17■□□□□ 0.18
SYNE2-201ENST00000341472 LINC00574Q9H8X3 128 aa16.17■□□□□ 0.18
SYNE2-201ENST00000341472 SCN3BQ9NY72 215 aa16.17■□□□□ 0.18
SYNE2-201ENST00000341472 IDI2-AS1Q9NZ38 188 aa16.17■□□□□ 0.18
SYNE2-201ENST00000341472 A0A1W2PPK0 400 aa16.16■□□□□ 0.18
SYNE2-201ENST00000341472 OOSP1A8MZH6 123 aa16.16■□□□□ 0.18
SYNE2-201ENST00000341472 LY6LH3BQJ8 138 aa16.16■□□□□ 0.18
SYNE2-201ENST00000341472 GZMHP20718 246 aa16.16■□□□□ 0.18
SYNE2-201ENST00000341472 PAX5Q02548 391 aa16.16■□□□□ 0.18
SYNE2-201ENST00000341472 EMX1Q04741 257 aaPredicted RBP16.16■□□□□ 0.18
SYNE2-201ENST00000341472 RBM39Q14498 530 aaKnown RBP16.16■□□□□ 0.18
SYNE2-201ENST00000341472 SLC22A6Q4U2R8 563 aa16.16■□□□□ 0.18
SYNE2-201ENST00000341472 RBM48Q5RL73 367 aaKnown RBP16.16■□□□□ 0.18
SYNE2-201ENST00000341472 UTF1Q5T230 341 aa16.16■□□□□ 0.18
SYNE2-201ENST00000341472 HIST2H2BDQ6DRA6 164 aa16.16■□□□□ 0.18
SYNE2-201ENST00000341472 CCDC144NLQ6NUI1 221 aa16.16■□□□□ 0.18
SYNE2-201ENST00000341472 Q6ZS46 218 aa16.16■□□□□ 0.18
SYNE2-201ENST00000341472 C16orf82Q7Z2V1 217 aa16.16■□□□□ 0.18
SYNE2-201ENST00000341472 RFESDQ8TAC1 157 aa16.16■□□□□ 0.18
SYNE2-201ENST00000341472 PLPPR1Q8TBJ4 325 aa16.16■□□□□ 0.18
SYNE2-201ENST00000341472 MRGPRDQ8TDS7 321 aa16.16■□□□□ 0.18
SYNE2-201ENST00000341472 PGLYRP3Q96LB9 341 aa16.16■□□□□ 0.18
SYNE2-201ENST00000341472 TPRKBQ9Y3C4 175 aa16.16■□□□□ 0.18
SYNE2-201ENST00000341472 TRAV8-7A0A075B6U6 113 aa16.15■□□□□ 0.18
SYNE2-201ENST00000341472 TRBV5-7A0A0A0MS05 114 aa16.15■□□□□ 0.18
SYNE2-201ENST00000341472 NPIPB11E5RHQ5 1161 aa16.15■□□□□ 0.18
SYNE2-201ENST00000341472 GEMIN2O14893 280 aaKnown RBP16.15■□□□□ 0.18
SYNE2-201ENST00000341472 FBXO24O75426 580 aa16.15■□□□□ 0.18
SYNE2-201ENST00000341472 IL1AP01583 271 aa16.15■□□□□ 0.18
SYNE2-201ENST00000341472 GTF2F2P13984 249 aa16.15■□□□□ 0.18
SYNE2-201ENST00000341472 SERPINA2P20848 420 aa16.15■□□□□ 0.18
SYNE2-201ENST00000341472 MNDAP41218 407 aa16.15■□□□□ 0.18
SYNE2-201ENST00000341472 RBM11P57052 281 aaKnown RBP16.15■□□□□ 0.18
SYNE2-201ENST00000341472 GPR176Q14439 515 aa16.15■□□□□ 0.18
SYNE2-201ENST00000341472 LTC4SQ16873 150 aa16.15■□□□□ 0.18
SYNE2-201ENST00000341472 PDLIM3Q53GG5 364 aaPredicted RBP16.15■□□□□ 0.18
SYNE2-201ENST00000341472 AHSA2Q719I0 299 aa16.15■□□□□ 0.18
SYNE2-201ENST00000341472 LINC00596Q86U02 117 aa16.15■□□□□ 0.18
SYNE2-201ENST00000341472 WNT10AQ9GZT5 417 aa16.15■□□□□ 0.18
SYNE2-201ENST00000341472 MMP28Q9H239 520 aa16.15■□□□□ 0.18
SYNE2-201ENST00000341472 LIN7BQ9HAP6 207 aa16.15■□□□□ 0.18
SYNE2-201ENST00000341472 ZNF581Q9P0T4 197 aa16.15■□□□□ 0.18
SYNE2-201ENST00000341472 BLOC1S6Q9UL45 172 aa16.15■□□□□ 0.18
SYNE2-201ENST00000341472 TRAV39A0A0B4J263 110 aa16.14■□□□□ 0.17
SYNE2-201ENST00000341472 PNMA8CA0A1B0GUJ8 204 aa16.14■□□□□ 0.17
SYNE2-201ENST00000341472 J3QR06 171 aa16.14■□□□□ 0.17
SYNE2-201ENST00000341472 MYL12BO14950 172 aa16.14■□□□□ 0.17
SYNE2-201ENST00000341472 CD28P10747 220 aa16.14■□□□□ 0.17
SYNE2-201ENST00000341472 CELP19835 753 aa16.14■□□□□ 0.17
SYNE2-201ENST00000341472 VDAC2P45880 294 aaPredicted RBP16.14■□□□□ 0.17
SYNE2-201ENST00000341472 MPV17LQ2QL34 196 aa16.14■□□□□ 0.17
SYNE2-201ENST00000341472 ATAD3CQ5T2N8 411 aa16.14■□□□□ 0.17
SYNE2-201ENST00000341472 SLC16A12Q6ZSM3 486 aa16.14■□□□□ 0.17
SYNE2-201ENST00000341472 NANOGP1Q8N7R0 232 aa16.14■□□□□ 0.17
SYNE2-201ENST00000341472 OR10A7Q8NGE5 316 aa16.14■□□□□ 0.17
SYNE2-201ENST00000341472 OR14A2Q96R54 314 aa16.14■□□□□ 0.17
SYNE2-201ENST00000341472 ERGIC3Q9Y282 383 aa16.14■□□□□ 0.17
SYNE2-201ENST00000341472 AMMECR1Q9Y4X0 333 aaPredicted RBP16.14■□□□□ 0.17
SYNE2-201ENST00000341472 TMEM30CPA0ZSE6 113 aa16.13■□□□□ 0.17
SYNE2-201ENST00000341472 IGHV3-7P01780 117 aa16.13■□□□□ 0.17
SYNE2-201ENST00000341472 CD1AP06126 327 aa16.13■□□□□ 0.17
SYNE2-201ENST00000341472 FAM106CPP0CH98 169 aa16.13■□□□□ 0.17
SYNE2-201ENST00000341472 WNT4P56705 351 aa16.13■□□□□ 0.17
SYNE2-201ENST00000341472 NSUN5P1Q3KNT7 163 aa16.13■□□□□ 0.17
SYNE2-201ENST00000341472 CDH26Q8IXH8 852 aa16.13■□□□□ 0.17
SYNE2-201ENST00000341472 JAGN1Q8N5M9 183 aa16.13■□□□□ 0.17
SYNE2-201ENST00000341472 LEAP2Q969E1 77 aa16.13■□□□□ 0.17
SYNE2-201ENST00000341472 MUL1Q969V5 352 aa16.13■□□□□ 0.17
SYNE2-201ENST00000341472 RPEQ96AT9 228 aa16.13■□□□□ 0.17
SYNE2-201ENST00000341472 RBM14Q96PK6 669 aaKnown RBP16.13■□□□□ 0.17
SYNE2-201ENST00000341472 OCSTAMPQ9BR26 566 aa16.13■□□□□ 0.17
SYNE2-201ENST00000341472 SLC25A33Q9BSK2 321 aa16.13■□□□□ 0.17
SYNE2-201ENST00000341472 PSG11Q9UQ72 335 aa16.13■□□□□ 0.17
SYNE2-201ENST00000341472 MRPS28Q9Y2Q9 187 aaKnown RBP16.13■□□□□ 0.17
SYNE2-201ENST00000341472 KIAA2026Q5HYC2 2103 aa16.13■□□□□ 0.17
SYNE2-201ENST00000341472 A0A1W2PP11 408 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms