RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 RIMS4Q9H426 269 aaPredicted RBP12.45□□□□□ -0.42
TDP2-201ENST00000341060 SPACA1Q9HBV2 294 aa12.45□□□□□ -0.42
TDP2-201ENST00000341060 LYRM2Q9NU23 88 aaPredicted RBP12.45□□□□□ -0.42
TDP2-201ENST00000341060 IGKV1-6A0A0C4DH72 117 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 CD300LBA8K4G0 201 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 HSPB6O14558 160 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 PRH1P02810 166 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 CRYBA1P05813 215 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 PLP2Q04941 152 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 NMSQ5H8A3 153 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 LILRB1Q8NHL6 650 aaPredicted RBP12.44□□□□□ -0.42
TDP2-201ENST00000341060 OR5P3Q8WZ94 311 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 HIST1H2AAQ96QV6 131 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 COL25A1Q9BXS0 654 aaPredicted RBP12.44□□□□□ -0.42
TDP2-201ENST00000341060 SMCO4Q9NRQ5 59 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 IGSF23A1L1A6 192 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 FAM24AA6NFZ4 105 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 COLCA2A8K830 154 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 PITX3O75364 302 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 PRKACAP17612 351 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 VDAC1P21796 283 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 POLR2GP62487 172 aaKnown RBP eCLIP12.44□□□□□ -0.42
TDP2-201ENST00000341060 KDF1Q8NAX2 398 aaPredicted RBP12.44□□□□□ -0.42
TDP2-201ENST00000341060 SUMF1Q8NBK3 374 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 PLA2G3Q9NZ20 509 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 OTOGLQ3ZCN5 2332 aa12.44□□□□□ -0.42
TDP2-201ENST00000341060 TRBV6-6A0A0A6YYG2 114 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 K7N7A8 449 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 ADAM20O43506 726 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 SSSCA1O60232 199 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 PLGLB1Q02325 96 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 TMEM164Q5U3C3 297 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 LINC00696Q6ZRV3 163 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 CMTM1Q8IZ96 169 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 C15orf54Q8N8G6 183 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 SUMF2Q8NBJ7 301 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 LFNGQ8NES3 379 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 MRPL30Q8TCC3 161 aaKnown RBP12.43□□□□□ -0.42
TDP2-201ENST00000341060 EIF5A2Q9GZV4 153 aaKnown RBP12.43□□□□□ -0.42
TDP2-201ENST00000341060 PLEKHF2Q9H8W4 249 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 MPC1Q9Y5U8 109 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 KNTC1P50748 2209 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 OR5B21A6NL26 309 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 ANKRD30BLA7E2S9 258 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 H0Y980 276 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 ZNF806P0C7X5 589 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 FOLR2P14207 255 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 ASCL1P50553 236 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 PCSK4Q6UW60 755 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 TMEM182Q6ZP80 229 aaPredicted RBP12.43□□□□□ -0.42
TDP2-201ENST00000341060 NUFIP2Q7Z417 695 aaKnown RBP12.43□□□□□ -0.42
TDP2-201ENST00000341060 ZNF573Q86YE8 665 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 OR5D13Q8NGL4 314 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 IL22RA2Q969J5 263 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 GPHA2Q96T91 129 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 SLC25A31Q9H0C2 315 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 BIN3Q9NQY0 253 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 CCL28Q9NRJ3 127 aa12.43□□□□□ -0.42
TDP2-201ENST00000341060 FAM186AA6NE01 2351 aa12.42□□□□□ -0.42
TDP2-201ENST00000341060 ZFHX2Q9C0A1 2572 aaPredicted RBP12.42□□□□□ -0.42
TDP2-201ENST00000341060 HSD17B6O14756 317 aa12.42□□□□□ -0.42
TDP2-201ENST00000341060 SLC34A2O95436 690 aa12.42□□□□□ -0.42
TDP2-201ENST00000341060 WNT5AP41221 380 aa12.42□□□□□ -0.42
TDP2-201ENST00000341060 HOXA1P49639 335 aaPredicted RBP12.42□□□□□ -0.42
TDP2-201ENST00000341060 GNG3P63215 75 aa12.42□□□□□ -0.42
TDP2-201ENST00000341060 ID3Q02535 119 aa12.42□□□□□ -0.42
TDP2-201ENST00000341060 TCF15Q12870 199 aa12.42□□□□□ -0.42
TDP2-201ENST00000341060 IL24Q13007 206 aa12.42□□□□□ -0.42
TDP2-201ENST00000341060 CLINT1Q14677 625 aa12.42□□□□□ -0.42
TDP2-201ENST00000341060 AWAT1Q58HT5 328 aa12.42□□□□□ -0.42
TDP2-201ENST00000341060 CXorf66Q5JRM2 361 aaPredicted RBP12.42□□□□□ -0.42
TDP2-201ENST00000341060 ETV3LQ6ZN32 361 aa12.42□□□□□ -0.42
TDP2-201ENST00000341060 C20orf204Q6ZNR8 217 aa12.42□□□□□ -0.42
TDP2-201ENST00000341060 MCEMP1Q8IX19 187 aa12.42□□□□□ -0.42
TDP2-201ENST00000341060 TMEM252Q8N6L7 170 aa12.42□□□□□ -0.42
TDP2-201ENST00000341060 PBDC1Q9BVG4 233 aa12.42□□□□□ -0.42
TDP2-201ENST00000341060 EGLN1Q9GZT9 426 aa12.42□□□□□ -0.42
TDP2-201ENST00000341060 MUC6Q6W4X9 2439 aa12.42□□□□□ -0.42
TDP2-201ENST00000341060 ASPMQ8IZT6 3477 aa12.42□□□□□ -0.42
TDP2-201ENST00000341060 A0A1B0GW64 132 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 LILRA1O75019 489 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 CD59P13987 128 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 MMP9P14780 707 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 APLNRP35414 380 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 CLN3Q13286 438 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 C3AR1Q16581 482 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 TMEM171Q8WVE6 324 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 RPS10P5Q9NQ39 176 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 KLF13Q9Y2Y9 288 aaPredicted RBP12.41□□□□□ -0.42
TDP2-201ENST00000341060 TRAV24A0A0B4J272 114 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 UMAD1C9J7I0 102 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 PROB1E7EW31 1015 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 ATP6V0CP27449 155 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 MEOX1P50221 254 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 VAMP2P63027 116 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 BAXQ07812 192 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 ZNF880Q6PDB4 577 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 ODF3L1Q8IXM7 274 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 FAM58AQ8N1B3 248 aa12.41□□□□□ -0.42
TDP2-201ENST00000341060 FAM213BQ8TBF2 198 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms