RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 BOD1Q96IK1 185 aa13.5□□□□□ -0.25
CCDC144A-202ENST00000340621 NRIP2Q9BQI9 281 aa13.5□□□□□ -0.25
CCDC144A-202ENST00000340621 TMEM222Q9H0R3 208 aa13.5□□□□□ -0.25
CCDC144A-202ENST00000340621 OPN3Q9H1Y3 402 aaPredicted RBP13.5□□□□□ -0.25
CCDC144A-202ENST00000340621 RHOFQ9HBH0 211 aa13.5□□□□□ -0.25
CCDC144A-202ENST00000340621 CCL28Q9NRJ3 127 aa13.5□□□□□ -0.25
CCDC144A-202ENST00000340621 COQ3Q9NZJ6 369 aa13.5□□□□□ -0.25
CCDC144A-202ENST00000340621 TINAGQ9UJW2 476 aa13.5□□□□□ -0.25
CCDC144A-202ENST00000340621 AKAP13Q12802 2813 aa13.5□□□□□ -0.25
CCDC144A-202ENST00000340621 RIF1Q5UIP0 2472 aaKnown RBP13.5□□□□□ -0.25
CCDC144A-202ENST00000340621 PTPRBP23467 1997 aa13.5□□□□□ -0.25
CCDC144A-202ENST00000340621 MGAQ8IWI9 3026 aa13.5□□□□□ -0.25
CCDC144A-202ENST00000340621 TRAV39A0A0B4J263 110 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 HSD17B6O14756 317 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 TAAR5O14804 337 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 OR2H2O95918 312 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 SEM1Q6ZVN7 128 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 C1orf162Q8NEQ5 155 aaPredicted RBP13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 RNF141Q8WVD5 230 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 USB1Q9BQ65 265 aaKnown RBP13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 ASF1BQ9NVP2 202 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 FBXO9Q9UK97 447 aaPredicted RBP13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 POLDIP2Q9Y2S7 368 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 AMDHD2Q9Y303 409 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 TMED3Q9Y3Q3 217 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 SIRPB1O00241 398 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 GPR31O00270 319 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 CGAP01215 116 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 PGA5P0DJD9 388 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 TMEM33P57088 247 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 OR8G1Q15617 311 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 IGFL3Q6UXB1 125 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 CLEC9AQ6UXN8 241 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 SPERTQ8NA61 448 aa13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 UBE2J1Q9Y385 318 aaPredicted RBP13.49□□□□□ -0.25
CCDC144A-202ENST00000340621 SLC33A1O00400 549 aaPredicted RBP13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 CECR9P0C854 216 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 RND3P61587 244 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 Q8IYB0 196 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 OR4A4PQ8NGN8 299 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 MARC2Q969Z3 335 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 TMEM56Q96MV1 263 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 TAF9BQ9HBM6 251 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 OBP2BQ9NPH6 170 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 ZNF71Q9NQZ8 489 aaPredicted RBP13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 TMEM56-RWDD3S4R434 201 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 NKX2-6A6NCS4 301 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 E5RGE8 158 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 NXPH2O95156 264 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 M6PRP20645 277 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 ZNF324BQ6AW86 544 aaPredicted RBP13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 OR10J5Q8NHC4 309 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 PLPPR1Q8TBJ4 325 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 KIRREL1Q96J84 757 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 SMIM3Q9BZL3 60 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 PLEKHA2Q9HB19 425 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 FBXL17Q9UF56 701 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 FZR1Q9UM11 496 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 NSG2Q9Y328 171 aa13.48□□□□□ -0.25
CCDC144A-202ENST00000340621 MLNRO43193 412 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 HLA-DRB3P79483 266 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 SELENOHQ8IZQ5 122 aaKnown RBP13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 BPIFCQ8NFQ6 507 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 OR8G5Q8NG78 346 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 IL1F10Q8WWZ1 152 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 ERGIC1Q969X5 290 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 BSCL2Q96G97 398 aaPredicted RBP13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 MS4A7Q9GZW8 240 aaPredicted RBP13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 ERRFI1Q9UJM3 462 aaPredicted RBP13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 PURGQ9UJV8 347 aaKnown RBP13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 PROCRQ9UNN8 238 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 K7EM74 188 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 SIGLEC5O15389 551 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 TNFSF12O43508 249 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 HOXD4P09016 255 aaPredicted RBP13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 FABP6P51161 128 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 SRPXP78539 464 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 ZNF146Q15072 292 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 ZNF497Q6ZNH5 498 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 ZNF695Q8IW36 515 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 OR4D5Q8NGN0 318 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 LILRB1Q8NHL6 650 aaPredicted RBP13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 PIGMQ9H3S5 423 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 ZDHHC8Q9ULC8 765 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 OR2W1Q9Y3N9 320 aa13.47□□□□□ -0.25
CCDC144A-202ENST00000340621 ST8SIA3O43173 380 aa13.46□□□□□ -0.25
CCDC144A-202ENST00000340621 PGLYRP1O75594 196 aaPredicted RBP13.46□□□□□ -0.25
CCDC144A-202ENST00000340621 CDS2O95674 445 aa13.46□□□□□ -0.25
CCDC144A-202ENST00000340621 HOXA4Q00056 320 aaPredicted RBP13.46□□□□□ -0.25
CCDC144A-202ENST00000340621 ZNF826PQ6ZT77 177 aa13.46□□□□□ -0.25
CCDC144A-202ENST00000340621 C11orf53Q8IXP5 236 aa13.46□□□□□ -0.25
CCDC144A-202ENST00000340621 CMTM1Q8IZ96 169 aa13.46□□□□□ -0.25
CCDC144A-202ENST00000340621 H1FOOQ8IZA3 346 aaPredicted RBP13.46□□□□□ -0.25
CCDC144A-202ENST00000340621 PRR18Q8N4B5 295 aa13.46□□□□□ -0.25
CCDC144A-202ENST00000340621 TREM2Q9NZC2 230 aa13.46□□□□□ -0.25
CCDC144A-202ENST00000340621 OR1A1Q9P1Q5 309 aa13.46□□□□□ -0.25
CCDC144A-202ENST00000340621 TMEM210A6NLX4 147 aa13.45□□□□□ -0.26
CCDC144A-202ENST00000340621 SH2D1BO14796 132 aa13.45□□□□□ -0.26
CCDC144A-202ENST00000340621 IGLV1-44P01699 117 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms