RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 PTPRQQ9UMZ3 2332 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 MED19A0JLT2 244 aaPredicted RBP13.93□□□□□ -0.18
LITAF-201ENST00000339430 CD300LBA8K4G0 201 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 HSD17B6O14756 317 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 HS3ST1O14792 307 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 GPR137BO60478 399 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 GLAP06280 429 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 FHITP49789 147 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 PLP2Q04941 152 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 SPATA46Q5T0L3 261 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 C17orf78Q8N4C9 275 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 ZNF565Q8N9K5 539 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 DMBX1Q8NFW5 382 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 ABHD17AQ96GS6 310 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 HIST1H2AAQ96QV6 131 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 USB1Q9BQ65 265 aaKnown RBP13.93□□□□□ -0.18
LITAF-201ENST00000339430 SH3BGRL3Q9H299 93 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 PARP11Q9NR21 331 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 UBE2J1Q9Y385 318 aaPredicted RBP13.93□□□□□ -0.18
LITAF-201ENST00000339430 SPENQ96T58 3664 aaKnown RBP13.92□□□□□ -0.18
LITAF-201ENST00000339430 IGKV1D-13A0A0B4J2D9 117 aa13.92□□□□□ -0.18
LITAF-201ENST00000339430 WISP2O76076 250 aa13.92□□□□□ -0.18
LITAF-201ENST00000339430 SNAPINO95295 136 aa13.92□□□□□ -0.18
LITAF-201ENST00000339430 NAPSAO96009 420 aa13.92□□□□□ -0.18
LITAF-201ENST00000339430 TK1P04183 234 aa13.92□□□□□ -0.18
LITAF-201ENST00000339430 IGKV1-13P0DP09 117 aa13.92□□□□□ -0.18
LITAF-201ENST00000339430 ARR3P36575 388 aa13.92□□□□□ -0.18
LITAF-201ENST00000339430 PMELP40967 661 aa13.92□□□□□ -0.18
LITAF-201ENST00000339430 WNT5AP41221 380 aa13.92□□□□□ -0.18
LITAF-201ENST00000339430 F2RL1P55085 397 aa13.92□□□□□ -0.18
LITAF-201ENST00000339430 TMPRSS3P57727 454 aa13.92□□□□□ -0.18
LITAF-201ENST00000339430 TBR1Q16650 682 aa13.92□□□□□ -0.18
LITAF-201ENST00000339430 MKXQ8IYA7 352 aa13.92□□□□□ -0.18
LITAF-201ENST00000339430 GAPTQ8N292 157 aa13.92□□□□□ -0.18
LITAF-201ENST00000339430 SPRR3Q9UBC9 169 aa13.92□□□□□ -0.18
LITAF-201ENST00000339430 TMED3Q9Y3Q3 217 aa13.92□□□□□ -0.18
LITAF-201ENST00000339430 ATMQ13315 3056 aa13.92□□□□□ -0.18
LITAF-201ENST00000339430 ZNF724A8MTY0 619 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 SLC33A1O00400 549 aaPredicted RBP13.91□□□□□ -0.18
LITAF-201ENST00000339430 C1QL1O75973 258 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 NXPH3O95157 252 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 COX5BP10606 129 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 IL32P24001 234 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 ZNF616Q08AN1 781 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 Q6ZS92 163 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 MED12LQ86YW9 2145 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 ZNF695Q8IW36 515 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 SPAG16Q8N0X2 631 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 RBMXL3Q8N7X1 1067 aaKnown RBP13.91□□□□□ -0.18
LITAF-201ENST00000339430 HSD17B11Q8NBQ5 300 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 OR4D5Q8NGN0 318 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 TAAR6Q96RI8 345 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 TMEM222Q9H0R3 208 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 PLSCR2Q9NRY7 297 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 FAM90A10PA6NDY2 464 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 FAM90A18PA6NE21 464 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 FAM90A16PA6NEW6 464 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 FAM90A20PA6NIJ5 464 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 FAM90A8PA6NJQ4 464 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 FAM90A7PA6NKC0 464 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 FAM90A22PA8MWA6 464 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 FAM90A12PA8MX19 464 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 FAM90A5PA8MXJ8 464 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 FAM90A23PA8MXZ1 464 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 TNFSF12O43508 249 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 FAM90A15PP0C7V4 464 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 FAM90A13PP0C7W8 464 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 FAM90A14PP0C7W9 464 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 FAM90A24PP0C7X0 464 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 AKIRIN2Q53H80 203 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 RDH5Q92781 318 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 CCL28Q9NRJ3 127 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 PIEZO2Q9H5I5 2752 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 CACNA1AO00555 2505 aa13.91□□□□□ -0.18
LITAF-201ENST00000339430 BORCS7-ASMTA0A0B4J1R7 106 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 IGKV1-6A0A0C4DH72 117 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 SLC22A20A6NK97 555 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 C1QTNF9BB2RNN3 333 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 TRDCB7Z8K6 153 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 SS18L1O75177 396 aaPredicted RBP13.9□□□□□ -0.18
LITAF-201ENST00000339430 C1QTNF9P0C862 333 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 PVALBP20472 110 aaPredicted RBP13.9□□□□□ -0.18
LITAF-201ENST00000339430 APLNRP35414 380 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 P2RY1P47900 373 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 POLR2GP62487 172 aaKnown RBP eCLIP13.9□□□□□ -0.18
LITAF-201ENST00000339430 IL13RA2Q14627 380 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 MIDNQ504T8 468 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 OR2T2Q6IF00 324 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 C20orf204Q6ZNR8 217 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 SAXO1Q8IYX7 474 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 OR5A2Q8NGI9 324 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 MAGT1Q9H0U3 335 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 FAM212BQ9NTI7 297 aaPredicted RBP13.9□□□□□ -0.18
LITAF-201ENST00000339430 LUZP4Q9P127 313 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 FAM24AA6NFZ4 105 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 IL18BPO95998 194 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 CA6P23280 308 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 GNMTQ14749 295 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 RNPS1Q15287 305 aaKnown RBP13.9□□□□□ -0.18
LITAF-201ENST00000339430 FAM76BQ5HYJ3 339 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms