RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 AESQ08117 197 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 SRSF4Q08170 494 aaKnown RBP6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 RBM39Q14498 530 aaKnown RBP6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 RGS7BPQ6MZT1 257 aaPredicted RBP6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 GLYATL2Q8WU03 294 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 MOB3AQ96BX8 217 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 MUCL1Q96DR8 90 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 SFXN3Q9BWM7 321 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 CLEC4MQ9H2X3 399 aaPredicted RBP6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 ATP23Q9Y6H3 246 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 FAM90A10PA6NDY2 464 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 FAM90A18PA6NE21 464 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 FAM90A16PA6NEW6 464 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 FAM90A20PA6NIJ5 464 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 FAM90A8PA6NJQ4 464 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 FAM90A7PA6NKC0 464 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 FAM90A22PA8MWA6 464 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 FAM90A12PA8MX19 464 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 FAM90A5PA8MXJ8 464 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 FAM90A23PA8MXZ1 464 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 HSD17B6O14756 317 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 SPRY3O43610 288 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 FAM90A15PP0C7V4 464 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 FAM90A13PP0C7W8 464 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 FAM90A14PP0C7W9 464 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 FAM90A24PP0C7X0 464 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 EGR1P18146 543 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 PMELP40967 661 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 RAB32Q13637 225 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 MBNL2Q5VZF2 373 aaKnown RBP6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 CLEC9AQ6UXN8 241 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 GSG1LQ6UXU4 331 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 SGPP2Q8IWX5 399 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 GAPTQ8N292 157 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 TMEM171Q8WVE6 324 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 SCGB3A2Q96PL1 93 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 DCTN5Q9BTE1 182 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 CCL28Q9NRJ3 127 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 RASL12Q9NYN1 266 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 ANKHD1Q8IWZ3 2542 aaKnown RBP6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 IGHV3OR15-7A0A075B7D8 119 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 RPS10-NUDT3A0A1W2PQS6 291 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 TRDCB7Z8K6 153 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 CRYAAP02489 173 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 RLN2P04090 185 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 PSMB6P28072 239 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 KCNJ3P48549 501 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 NKX6-1P78426 367 aaPredicted RBP6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 TMEM187Q14656 261 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 ZNF146Q15072 292 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 SURF2Q15527 256 aaPredicted RBP6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 TUSC1Q2TAM9 212 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 ABCA11PQ4W5N1 156 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 SPIN3Q5JUX0 258 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 UNQ6126/PRO20091Q6UXV3 157 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 MRPL37Q9BZE1 423 aaKnown RBP6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 C1orf123Q9NWV4 160 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 DCAF16Q9NXF7 216 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 COMMD9Q9P000 198 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 TNFSF18Q9UNG2 199 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 AMDHD2Q9Y303 409 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 AKAP6Q13023 2319 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 ACACBO00763 2458 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 CACNA1AO00555 2505 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 DSCAMO60469 2012 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 PHF1O43189 567 aaPredicted RBP6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 HAND1O96004 215 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 THBDP07204 575 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 CDSNQ15517 529 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 FAM74A1Q5RGS3 127 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 GGNBP1Q5YKI7 109 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 MEX3BQ6ZN04 569 aaKnown RBP6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 ZNF767PQ75MW2 155 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 WFDC8Q8IUA0 241 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 COQ8AQ8NI60 647 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 MSI2Q96DH6 328 aaKnown RBP6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 RBMXL1Q96E39 390 aaKnown RBP6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 OR2V2Q96R30 315 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 VRK1Q99986 396 aaPredicted RBP6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 CXXC4Q9H2H0 198 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 PLK3Q9H4B4 646 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 HES4Q9HCC6 221 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 ERRFI1Q9UJM3 462 aaPredicted RBP6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 POLDIP2Q9Y2S7 368 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 HIVEP3Q5T1R4 2406 aa6.23□□□□□ -1.41
SRFBP1-201ENST00000339397 DIRAS3O95661 229 aa6.22□□□□□ -1.41
SRFBP1-201ENST00000339397 TK1P04183 234 aa6.22□□□□□ -1.41
SRFBP1-201ENST00000339397 SELLP14151 372 aa6.22□□□□□ -1.41
SRFBP1-201ENST00000339397 ZNF250P15622 560 aa6.22□□□□□ -1.41
SRFBP1-201ENST00000339397 RPA2P15927 270 aa6.22□□□□□ -1.41
SRFBP1-201ENST00000339397 CD40P25942 277 aa6.22□□□□□ -1.41
SRFBP1-201ENST00000339397 GLP1RP43220 463 aa6.22□□□□□ -1.41
SRFBP1-201ENST00000339397 TMPRSS3P57727 454 aa6.22□□□□□ -1.41
SRFBP1-201ENST00000339397 HERV-K104P61576 105 aa6.22□□□□□ -1.41
SRFBP1-201ENST00000339397 IL15RAQ13261 267 aa6.22□□□□□ -1.41
SRFBP1-201ENST00000339397 IL13RA2Q14627 380 aa6.22□□□□□ -1.41
SRFBP1-201ENST00000339397 IAH1Q2TAA2 248 aaPredicted RBP6.22□□□□□ -1.41
SRFBP1-201ENST00000339397 LPCAT3Q6P1A2 487 aa6.22□□□□□ -1.41
SRFBP1-201ENST00000339397 ACP7Q6ZNF0 438 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 311.2 ms