RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TFF1P04155 84 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 RPS2P15880 293 aaKnown RBP12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 AESQ08117 197 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 ASAH1Q13510 395 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 KLF9Q13886 244 aaPredicted RBP12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 AVPI1Q5T686 147 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 LRRC75A-AS1Q8N1F1 130 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 TMEM229BQ8NBD8 167 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 FAM168AQ92567 244 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 PERPQ96FX8 193 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 COQ2Q96H96 371 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 PIMREGQ9BSJ6 248 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 ST6GALNAC5Q9BVH7 336 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 ZNF286AQ9HBT8 521 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 MBNL3Q9NUK0 354 aaKnown RBP12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 LPAR3Q9UBY5 353 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 PCDHB10Q9UN67 800 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 CENPXA8MT69 81 aa12.09□□□□□ -0.47
NIPAL3-202ENST00000339255 AKAIN1P0CW23 69 aa12.09□□□□□ -0.47
NIPAL3-202ENST00000339255 P2RX3P56373 397 aa12.09□□□□□ -0.47
NIPAL3-202ENST00000339255 IFITM3Q01628 133 aa12.09□□□□□ -0.47
NIPAL3-202ENST00000339255 C11orf91Q3C1V1 193 aa12.09□□□□□ -0.47
NIPAL3-202ENST00000339255 ZNF880Q6PDB4 577 aa12.09□□□□□ -0.47
NIPAL3-202ENST00000339255 GVQW1Q8N7I0 195 aa12.09□□□□□ -0.47
NIPAL3-202ENST00000339255 OR8B3Q8NGG8 313 aa12.09□□□□□ -0.47
NIPAL3-202ENST00000339255 OR8B2Q96RD0 313 aa12.09□□□□□ -0.47
NIPAL3-202ENST00000339255 Q9N2K0 584 aa12.09□□□□□ -0.47
NIPAL3-202ENST00000339255 OR6C3Q9NZP0 311 aa12.09□□□□□ -0.47
NIPAL3-202ENST00000339255 KIF25Q9UIL4 384 aa12.09□□□□□ -0.47
NIPAL3-202ENST00000339255 TRAPPC2LQ9UL33 140 aa12.09□□□□□ -0.47
NIPAL3-202ENST00000339255 MEIKINA0A087WXM9 373 aa12.08□□□□□ -0.48
NIPAL3-202ENST00000339255 ODAMA1E959 279 aa12.08□□□□□ -0.48
NIPAL3-202ENST00000339255 SELLP14151 372 aa12.08□□□□□ -0.48
NIPAL3-202ENST00000339255 NPY4RP50391 375 aa12.08□□□□□ -0.48
NIPAL3-202ENST00000339255 MEF2CQ06413 473 aaPredicted RBP12.08□□□□□ -0.48
NIPAL3-202ENST00000339255 EDDM3AQ14507 147 aa12.08□□□□□ -0.48
NIPAL3-202ENST00000339255 MEF2DQ14814 521 aa12.08□□□□□ -0.48
NIPAL3-202ENST00000339255 DEFB113Q30KQ7 82 aa12.08□□□□□ -0.48
NIPAL3-202ENST00000339255 CHRFAM7AQ494W8 412 aa12.08□□□□□ -0.48
NIPAL3-202ENST00000339255 C6orf183Q5T699 404 aa12.08□□□□□ -0.48
NIPAL3-202ENST00000339255 HIST2H2BCQ6DN03 193 aa12.08□□□□□ -0.48
NIPAL3-202ENST00000339255 SNAPC3Q92966 411 aa12.08□□□□□ -0.48
NIPAL3-202ENST00000339255 NEIL1Q96FI4 390 aaPredicted RBP12.08□□□□□ -0.48
NIPAL3-202ENST00000339255 CYYR1Q96J86 154 aa12.08□□□□□ -0.48
NIPAL3-202ENST00000339255 ZNF230Q9UIE0 474 aaPredicted RBP12.08□□□□□ -0.48
NIPAL3-202ENST00000339255 ANXA10Q9UJ72 324 aa12.08□□□□□ -0.48
NIPAL3-202ENST00000339255 A0A1B0GW55 424 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 NAP1L6A6NFF2 107 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 DVL1O14640 695 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 DIRAS3O95661 229 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 CD74P04233 296 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 DUX4L2P0CJ85 424 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 DUX4L3P0CJ86 424 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 DUX4L4P0CJ87 422 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 DUX4L5P0CJ88 424 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 DUX4L6P0CJ89 424 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 DUX4L7P0CJ90 424 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 NDUFB7P17568 137 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 EDDM3BP56851 147 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 ARPC4P59998 168 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 RNASE10Q5GAN6 216 aaKnown RBP12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 STEAP1BQ6NZ63 245 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 MZT2BQ6NZ67 158 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 DUX4L9Q6RFH8 374 aaPredicted RBP12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 LYPD2Q6UXB3 125 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 ZNF565Q8N9K5 539 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 OR5AP2Q8NGF4 316 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 OR4K15Q8NH41 348 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 C10orf105Q8TEF2 133 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 BPESC1Q9GZL8 116 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 PATZ1Q9HBE1 687 aaKnown RBP12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 RAB9BQ9NP90 201 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 KCNIP1Q9NZI2 227 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 CTSZQ9UBR2 303 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 DUX4Q9UBX2 424 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 OPN4Q9UHM6 478 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 TBC1D24Q9ULP9 559 aa12.07□□□□□ -0.48
NIPAL3-202ENST00000339255 TRBV23-1A0A0A0MS06 115 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 TRDCB7Z8K6 153 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 LYRM1O43325 122 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 CD3DP04234 171 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 GZMHP20718 246 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 GLIPR1P48060 266 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 OR52W1Q6IF63 320 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 OR5H2Q8NGV7 314 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 RAB39BQ96DA2 213 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 ING3Q9NXR8 418 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 CLN8Q9UBY8 286 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 ITPR2Q14571 2701 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 TRGV10A0A0A0MS01 117 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 hADV38S2A0JD32 116 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 F5H0A9 414 aaPredicted RBP12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 FABP7O15540 132 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 RAB3DO95716 219 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 WNT2P09544 360 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 CTXN2P0C2S0 81 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 RCC1P18754 421 aaPredicted RBP12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 HLA-DMAP28067 261 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 HRH1P35367 487 aa12.06□□□□□ -0.48
NIPAL3-202ENST00000339255 OR3A3P47888 321 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms