RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 ASCL1P50553 236 aa16.19■□□□□ 0.18
PSPC1-201ENST00000338910 FOXL2NBQ6ZUU3 175 aa16.19■□□□□ 0.18
PSPC1-201ENST00000338910 ZNF429Q86V71 674 aa16.19■□□□□ 0.18
PSPC1-201ENST00000338910 SUCNR1Q9BXA5 334 aa16.19■□□□□ 0.18
PSPC1-201ENST00000338910 A0A087X0M5 115 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 A0A1B0GX30 115 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 BTBD17A6NE02 478 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 ZNF716A6NP11 495 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 TMEM225BP0DP42 221 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 NDUFB7P17568 137 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 GLIPR1P48060 266 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 EWSR1Q01844 656 aaKnown RBP eCLIP16.18■□□□□ 0.18
PSPC1-201ENST00000338910 TSPO2Q5TGU0 170 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 LIAT1Q6ZQX7 453 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 AAED1Q7RTV5 226 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 STX12Q86Y82 276 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 OR2G3Q8NGZ4 309 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 TOMM40LQ969M1 308 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 BOD1Q96IK1 185 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 ADGRG7Q96K78 797 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 RYDENQ9NUL5 291 aaKnown RBP16.18■□□□□ 0.18
PSPC1-201ENST00000338910 FAM86C1Q9NVL1 165 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 BOKQ9UMX3 212 aaPredicted RBP16.18■□□□□ 0.18
PSPC1-201ENST00000338910 LIPGQ9Y5X9 500 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 CFAP47Q6ZTR5 3102 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 TSTD3H0UI37 97 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 CELA3AP09093 270 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 ZNF728P0DKX0 622 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 CTSSP25774 331 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 ATP6V0CP27449 155 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 CEBPGP53567 150 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 SRYQ05066 204 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 TCF15Q12870 199 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 HIST2H3PS2Q5TEC6 136 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 CYB561D1Q8N8Q1 229 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 MSI2Q96DH6 328 aaKnown RBP16.18■□□□□ 0.18
PSPC1-201ENST00000338910 LYZL4Q96KX0 146 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 ALKBH3Q96Q83 286 aaPredicted RBP16.18■□□□□ 0.18
PSPC1-201ENST00000338910 PLEKHJ1Q9NW61 149 aa16.18■□□□□ 0.18
PSPC1-201ENST00000338910 NUBP1P53384 320 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 GFRA1P56159 465 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 ICAM4Q14773 271 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 ATP1A1-AS1Q5TC04 95 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 FAM27BQ5VT28 67 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 OR2T2Q6IF00 324 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 FBXL14Q8N1E6 418 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 OR2M7Q8NG81 312 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 ABHD5Q8WTS1 349 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 ABHD3Q8WU67 409 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 TVP23CQ96ET8 276 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 FABP4P15090 132 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 GABRR1P24046 479 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 MRPS34P82930 218 aaKnown RBP16.17■□□□□ 0.18
PSPC1-201ENST00000338910 OR1C1Q15619 314 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 ABCA11PQ4W5N1 156 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 DTX1Q86Y01 620 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 ZFP62Q8NB50 900 aaPredicted RBP16.17■□□□□ 0.18
PSPC1-201ENST00000338910 FAM173AQ9BQD7 235 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 PRO1933Q9H354 126 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 C11orf1Q9H5F2 150 aa16.17■□□□□ 0.18
PSPC1-201ENST00000338910 KIAA1549Q9HCM3 1950 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 PRR33A8MZF0 331 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 SCAF4O95104 1147 aaKnown RBP16.16■□□□□ 0.18
PSPC1-201ENST00000338910 HSPB1P04792 205 aaKnown RBP16.16■□□□□ 0.18
PSPC1-201ENST00000338910 PATE4P0C8F1 98 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 TRGC1P0CF51 173 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 ZNF266Q14584 549 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 OR10AD1Q8NGE0 317 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 OR4D5Q8NGN0 318 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 RNASE11Q8TAA1 199 aaKnown RBP16.16■□□□□ 0.18
PSPC1-201ENST00000338910 FRZBQ92765 325 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 NIPSNAP3BQ9BS92 247 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 AK3Q9UIJ7 227 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 MRPS18CQ9Y3D5 142 aaKnown RBP16.16■□□□□ 0.18
PSPC1-201ENST00000338910 PRRC2CQ9Y520 2896 aaKnown RBP16.16■□□□□ 0.18
PSPC1-201ENST00000338910 MUC6Q6W4X9 2439 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 FAM166BA8MTA8 275 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 ZNF205O95201 554 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 IGLV3-1P01715 115 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 GLI4P10075 376 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 B4GALT1P15291 398 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 HIST1H3AP68431 136 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 SLC35E3Q7Z769 313 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 GPR137CQ8N3F9 429 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 ELL3Q9HB65 397 aaPredicted RBP16.16■□□□□ 0.18
PSPC1-201ENST00000338910 SLC2A9Q9NRM0 540 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 NECAP2Q9NVZ3 263 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 WSB1Q9Y6I7 421 aa16.16■□□□□ 0.18
PSPC1-201ENST00000338910 M0R135 149 aa16.15■□□□□ 0.18
PSPC1-201ENST00000338910 FCGR2AP12318 317 aa16.15■□□□□ 0.18
PSPC1-201ENST00000338910 PHLDA2Q53GA4 152 aa16.15■□□□□ 0.18
PSPC1-201ENST00000338910 ZNF506Q5JVG8 444 aa16.15■□□□□ 0.18
PSPC1-201ENST00000338910 LGI3Q8N145 548 aa16.15■□□□□ 0.18
PSPC1-201ENST00000338910 OR2C3Q8N628 320 aa16.15■□□□□ 0.18
PSPC1-201ENST00000338910 ZNF799Q96GE5 643 aa16.15■□□□□ 0.18
PSPC1-201ENST00000338910 Q96M66 194 aa16.15■□□□□ 0.18
PSPC1-201ENST00000338910 C2orf88Q9BSF0 95 aa16.15■□□□□ 0.18
PSPC1-201ENST00000338910 RRADP55042 308 aa16.15■□□□□ 0.18
PSPC1-201ENST00000338910 GNMTQ14749 295 aa16.15■□□□□ 0.18
PSPC1-201ENST00000338910 HAS2Q92819 552 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms