RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 PWWP2BQ6NUJ5 590 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.53□□□□□ -0.56
HLCS-201ENST00000336648 OR1B1Q8NGR6 318 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 NUMA1Q14980 2115 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 IGHV5-51A0A0C4DH38 117 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 SNURFLB1AK76 121 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 SHISA8B8ZZ34 492 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 H3BMH7 237 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 PPM1DO15297 605 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 SRP14P37108 136 aaKnown RBP11.53□□□□□ -0.56
HLCS-201ENST00000336648 MRPL54Q6P161 138 aaKnown RBP11.53□□□□□ -0.56
HLCS-201ENST00000336648 CALHM1Q8IU99 346 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 WDFY1Q8IWB7 410 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 RASL11BQ9BPW5 248 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 PRSS23O95084 383 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 CLEC18BQ6UXF7 455 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 CBLN2Q8IUK8 224 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 FAM206AQ9NX38 181 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 YBX1P67809 324 aaKnown RBP11.53□□□□□ -0.56
HLCS-201ENST00000336648 SLC35E3Q7Z769 313 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 LINC01555Q8NAE3 123 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 PTX4Q96A99 478 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 PARP11Q9NR21 331 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 DOK5Q9P104 306 aa11.53□□□□□ -0.56
HLCS-201ENST00000336648 ZNF98A6NK75 572 aa11.52□□□□□ -0.56
HLCS-201ENST00000336648 CXorf1O96002 111 aa11.52□□□□□ -0.56
HLCS-201ENST00000336648 LGALSLQ3ZCW2 172 aaPredicted RBP11.52□□□□□ -0.56
HLCS-201ENST00000336648 LILRA6Q6PI73 481 aa11.52□□□□□ -0.56
HLCS-201ENST00000336648 TMEM136Q6ZRR5 245 aa11.52□□□□□ -0.56
HLCS-201ENST00000336648 C11orf68Q9H3H3 251 aaKnown RBP11.52□□□□□ -0.56
HLCS-201ENST00000336648 RNF7Q9UBF6 113 aa11.52□□□□□ -0.56
HLCS-201ENST00000336648 KCNMB2Q9Y691 235 aa11.52□□□□□ -0.56
HLCS-201ENST00000336648 LIPT2A6NK58 231 aa11.52□□□□□ -0.56
HLCS-201ENST00000336648 C21orf140B9A014 251 aa11.52□□□□□ -0.56
HLCS-201ENST00000336648 COX7A1P24310 79 aa11.52□□□□□ -0.56
HLCS-201ENST00000336648 COL8A1P27658 744 aa11.52□□□□□ -0.56
HLCS-201ENST00000336648 IER3P46695 156 aa11.52□□□□□ -0.56
HLCS-201ENST00000336648 POLR2GP62487 172 aaKnown RBP eCLIP11.52□□□□□ -0.56
HLCS-201ENST00000336648 HOXA4Q00056 320 aaPredicted RBP11.52□□□□□ -0.56
HLCS-201ENST00000336648 ATG4DQ86TL0 474 aaPredicted RBP11.52□□□□□ -0.56
HLCS-201ENST00000336648 OR4B1Q8NGF8 309 aa11.52□□□□□ -0.56
HLCS-201ENST00000336648 WDR13Q9H1Z4 485 aa11.52□□□□□ -0.56
HLCS-201ENST00000336648 F2RL2O00254 374 aa11.52□□□□□ -0.57
HLCS-201ENST00000336648 TNFSF14O43557 240 aa11.52□□□□□ -0.57
HLCS-201ENST00000336648 ITGBL1O95965 494 aaPredicted RBP11.52□□□□□ -0.57
HLCS-201ENST00000336648 SEC11BP0C7V7 166 aa11.52□□□□□ -0.57
HLCS-201ENST00000336648 ERVFRD-1P60508 538 aa11.52□□□□□ -0.57
HLCS-201ENST00000336648 FOXC1Q12948 553 aa11.52□□□□□ -0.57
HLCS-201ENST00000336648 UBE2V2Q15819 145 aa11.52□□□□□ -0.57
HLCS-201ENST00000336648 ZNF665Q9H7R5 613 aa11.52□□□□□ -0.57
HLCS-201ENST00000336648 C7orf77A4D0Y5 90 aa11.52□□□□□ -0.57
HLCS-201ENST00000336648 C17orf47Q8NEP4 570 aa11.52□□□□□ -0.57
HLCS-201ENST00000336648 MAFAQ8NHW3 353 aaPredicted RBP11.52□□□□□ -0.57
HLCS-201ENST00000336648 ZNF502Q8TBZ5 544 aa11.52□□□□□ -0.57
HLCS-201ENST00000336648 TMPRSS13Q9BYE2 586 aa11.52□□□□□ -0.57
HLCS-201ENST00000336648 LHX8Q68G74 356 aa11.52□□□□□ -0.57
HLCS-201ENST00000336648 OR2Y1Q8NGV0 311 aa11.52□□□□□ -0.57
HLCS-201ENST00000336648 NPIPB8E9PQR5 432 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 CD74P04233 296 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 RNASE1P07998 156 aaKnown RBP11.51□□□□□ -0.57
HLCS-201ENST00000336648 NPBWR2P48146 333 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 ZNF345Q14585 488 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 VN1R4Q7Z5H5 301 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 CTXND1A0A1B0GTU2 59 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 MVDP53602 400 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 C19orf54Q5BKX5 351 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 CCDC144NLQ6NUI1 221 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 LIMS2Q7Z4I7 341 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 TXNDC17Q9BRA2 123 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 PLCH1Q4KWH8 1693 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 CD1AP06126 327 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 ID1P41134 155 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 SMUG1Q53HV7 270 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 HES3Q5TGS1 186 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 C10orf113Q5VZT2 155 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 FAM109BQ6ICB4 259 aaPredicted RBP11.51□□□□□ -0.57
HLCS-201ENST00000336648 ARL6IP6Q8N6S5 226 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 ABHD1Q96SE0 405 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 TMEM38BQ9NVV0 291 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 MED19A0JLT2 244 aaPredicted RBP11.51□□□□□ -0.57
HLCS-201ENST00000336648 SRSF10O75494 262 aaKnown RBP11.51□□□□□ -0.57
HLCS-201ENST00000336648 PPYP01298 95 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 RELBQ01201 579 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 PSG5Q15238 335 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 NSUN5P2Q63ZY6 315 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 THSD4Q6ZMP0 1018 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 SPAG8Q99932 426 aaPredicted RBP11.51□□□□□ -0.57
HLCS-201ENST00000336648 PMELP40967 661 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 PDCD1Q15116 288 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 PMCHL1Q16048 86 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 NUDT10Q8NFP7 164 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 NUDT11Q96G61 164 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 DIRC2Q96SL1 478 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 COA4Q9NYJ1 87 aa11.51□□□□□ -0.57
HLCS-201ENST00000336648 CHST1O43916 411 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 MMP9P14780 707 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 CTGFP29279 349 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 INO80CQ6PI98 192 aaPredicted RBP11.5□□□□□ -0.57
HLCS-201ENST00000336648 MS4A5Q9H3V2 200 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 UQCR10Q9UDW1 63 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms