RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 SNAPINO95295 136 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 FGF12P61328 243 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 RUNX1Q01196 453 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 EWSR1Q01844 656 aaKnown RBP eCLIP12.68□□□□□ -0.38
UBA1-201ENST00000335972 HES3Q5TGS1 186 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 CXorf67Q86X51 503 aaPredicted RBP12.68□□□□□ -0.38
UBA1-201ENST00000335972 CCDC71LQ8N9Z2 235 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 ZFP62Q8NB50 900 aaPredicted RBP12.68□□□□□ -0.38
UBA1-201ENST00000335972 OR1A1Q9P1Q5 309 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 ZNF391Q9UJN7 358 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 GPR137BO60478 399 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 SP9P0CG40 484 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 OR13C7P0DN81 318 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 PLA2G5P39877 138 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 GNMTQ14749 295 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 LILRB1Q8NHL6 650 aaPredicted RBP12.68□□□□□ -0.38
UBA1-201ENST00000335972 SEC11CQ9BY50 192 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 PLEKHA2Q9HB19 425 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 ABI3Q9P2A4 366 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 CARHSP1Q9Y2V2 147 aaKnown RBP12.68□□□□□ -0.38
UBA1-201ENST00000335972 ATXN7O15265 892 aaPredicted RBP12.68□□□□□ -0.38
UBA1-201ENST00000335972 TMEM50AO95807 157 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 SP1P08047 785 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 NKX2-1P43699 371 aaPredicted RBP12.68□□□□□ -0.38
UBA1-201ENST00000335972 CEBPDP49716 269 aaPredicted RBP12.68□□□□□ -0.38
UBA1-201ENST00000335972 RXFP4Q8TDU9 374 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 BCL2L14Q9BZR8 327 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 RPS10P5Q9NQ39 176 aa12.68□□□□□ -0.38
UBA1-201ENST00000335972 CADP27708 2225 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 BORCS7-ASMTA0A0B4J1R7 106 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 IL18BPO95998 194 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 KCNJ3P48549 501 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 IDH3GP51553 393 aaPredicted RBP12.67□□□□□ -0.38
UBA1-201ENST00000335972 FAM180AQ6UWF9 173 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 SELENOHQ8IZQ5 122 aaKnown RBP12.67□□□□□ -0.38
UBA1-201ENST00000335972 CLCC1Q96S66 551 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 TMEM222Q9H0R3 208 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 FAM212BQ9NTI7 297 aaPredicted RBP12.67□□□□□ -0.38
UBA1-201ENST00000335972 ERRFI1Q9UJM3 462 aaPredicted RBP12.67□□□□□ -0.38
UBA1-201ENST00000335972 RIF1Q5UIP0 2472 aaKnown RBP12.67□□□□□ -0.38
UBA1-201ENST00000335972 TRDCB7Z8K6 153 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 PROB1E7EW31 1015 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 M0R036 132 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 CRYBA1P05813 215 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 APLNRP35414 380 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 CCL20P78556 96 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 CLN3Q13286 438 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 UBAC2Q8NBM4 344 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 IP6K3Q96PC2 410 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 RARRES2Q99969 163 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 SPACA1Q9HBV2 294 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 SPRR3Q9UBC9 169 aa12.67□□□□□ -0.38
UBA1-201ENST00000335972 A0A0G2JRQ6 117 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 ANKRD30BLA7E2S9 258 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 LYZL6O75951 148 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 OR4D5Q8NGN0 318 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 CD300LFQ8TDQ1 290 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 TMEM171Q8WVE6 324 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 COL27A1Q8IZC6 1860 aaPredicted RBP12.66□□□□□ -0.38
UBA1-201ENST00000335972 SMG1Q96Q15 3661 aaKnown RBP12.66□□□□□ -0.38
UBA1-201ENST00000335972 TRAV24A0A0B4J272 114 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 SLC10A1Q14973 349 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 GUK1Q16774 197 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 OR2C3Q8N628 320 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 C14orf79Q96F83 325 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 DDA1Q9BW61 102 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 PARP11Q9NR21 331 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 GLRX2Q9NS18 164 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 C19orf12Q9NSK7 152 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 FZR1Q9UM11 496 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 PPP1R3CQ9UQK1 317 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 ZNF724A8MTY0 619 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 CNOT4O95628 575 aaKnown RBP12.66□□□□□ -0.38
UBA1-201ENST00000335972 NAPSAO96009 420 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 GAPDHP04406 335 aaKnown RBP12.66□□□□□ -0.38
UBA1-201ENST00000335972 SPP1P10451 314 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 ARG2P78540 354 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 ZNF154Q13106 437 aa12.66□□□□□ -0.38
UBA1-201ENST00000335972 MRPS18CQ9Y3D5 142 aaKnown RBP12.66□□□□□ -0.38
UBA1-201ENST00000335972 SLC34A2O95436 690 aa12.65□□□□□ -0.38
UBA1-201ENST00000335972 CD5P06127 495 aa12.65□□□□□ -0.38
UBA1-201ENST00000335972 P2RY1P47900 373 aa12.65□□□□□ -0.38
UBA1-201ENST00000335972 PEA15Q15121 130 aa12.65□□□□□ -0.38
UBA1-201ENST00000335972 C10orf91Q5T1B1 145 aa12.65□□□□□ -0.38
UBA1-201ENST00000335972 BOD1Q96IK1 185 aa12.65□□□□□ -0.38
UBA1-201ENST00000335972 ZPBPQ9BS86 351 aa12.65□□□□□ -0.38
UBA1-201ENST00000335972 OR14J1Q9UGF5 321 aa12.65□□□□□ -0.38
UBA1-201ENST00000335972 RBM7Q9Y580 266 aaKnown RBP12.65□□□□□ -0.38
UBA1-201ENST00000335972 GRPP07492 148 aa12.65□□□□□ -0.38
UBA1-201ENST00000335972 VAMP2P63027 116 aa12.65□□□□□ -0.38
UBA1-201ENST00000335972 DHRS7BQ6IAN0 325 aaPredicted RBP12.65□□□□□ -0.38
UBA1-201ENST00000335972 OR5C1Q8NGR4 320 aa12.65□□□□□ -0.38
UBA1-201ENST00000335972 RNASE11Q8TAA1 199 aaKnown RBP12.65□□□□□ -0.38
UBA1-201ENST00000335972 MRPL30Q8TCC3 161 aaKnown RBP12.65□□□□□ -0.38
UBA1-201ENST00000335972 OR5P3Q8WZ94 311 aa12.65□□□□□ -0.38
UBA1-201ENST00000335972 LINC00470Q9BZP3 86 aa12.65□□□□□ -0.38
UBA1-201ENST00000335972 OR2J1Q9GZK6 312 aa12.65□□□□□ -0.38
UBA1-201ENST00000335972 FAM86C1Q9NVL1 165 aa12.65□□□□□ -0.38
UBA1-201ENST00000335972 ZNF175Q9Y473 711 aa12.65□□□□□ -0.38
UBA1-201ENST00000335972 POMT1Q9Y6A1 747 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms