RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 GPR87Q9BY21 358 aa12□□□□□ -0.49
SF1-202ENST00000334944 EHFQ9NZC4 300 aa12□□□□□ -0.49
SF1-202ENST00000334944 SHANK1Q9Y566 2161 aa12□□□□□ -0.49
SF1-202ENST00000334944 LRRC3CA6NJW4 275 aa12□□□□□ -0.49
SF1-202ENST00000334944 TAAR5O14804 337 aa12□□□□□ -0.49
SF1-202ENST00000334944 TNFSF12O43508 249 aa12□□□□□ -0.49
SF1-202ENST00000334944 CHRM2P08172 466 aa12□□□□□ -0.49
SF1-202ENST00000334944 LYL1P12980 280 aa12□□□□□ -0.49
SF1-202ENST00000334944 CCL2P13500 99 aa12□□□□□ -0.49
SF1-202ENST00000334944 CCNOP22674 350 aa12□□□□□ -0.49
SF1-202ENST00000334944 TDGF1P3P51864 188 aa12□□□□□ -0.49
SF1-202ENST00000334944 C10orf128Q5T292 105 aa12□□□□□ -0.49
SF1-202ENST00000334944 FAHD2BQ6P2I3 314 aaPredicted RBP12□□□□□ -0.49
SF1-202ENST00000334944 AAED1Q7RTV5 226 aa12□□□□□ -0.49
SF1-202ENST00000334944 GGNQ86UU5 652 aa12□□□□□ -0.49
SF1-202ENST00000334944 OR5R1Q8NH85 324 aa12□□□□□ -0.49
SF1-202ENST00000334944 FAHD2AQ96GK7 314 aa12□□□□□ -0.49
SF1-202ENST00000334944 URM1Q9BTM9 101 aaKnown RBP12□□□□□ -0.49
SF1-202ENST00000334944 MCTS1Q9ULC4 181 aaKnown RBP12□□□□□ -0.49
SF1-202ENST00000334944 PET100P0DJ07 73 aa12□□□□□ -0.49
SF1-202ENST00000334944 OPRM1P35372 400 aa12□□□□□ -0.49
SF1-202ENST00000334944 ZXDAP98168 799 aa12□□□□□ -0.49
SF1-202ENST00000334944 TLE1Q04724 770 aa12□□□□□ -0.49
SF1-202ENST00000334944 CEACAM16Q2WEN9 425 aa12□□□□□ -0.49
SF1-202ENST00000334944 ETFRF1Q6IPR1 90 aa12□□□□□ -0.49
SF1-202ENST00000334944 OR13G1Q8NGZ3 307 aa12□□□□□ -0.49
SF1-202ENST00000334944 MRPL24Q96A35 216 aaKnown RBP12□□□□□ -0.49
SF1-202ENST00000334944 PLA2G3Q9NZ20 509 aa12□□□□□ -0.49
SF1-202ENST00000334944 PCSK5Q92824 1860 aa11.99□□□□□ -0.49
SF1-202ENST00000334944 ZFHX4Q86UP3 3567 aa11.99□□□□□ -0.49
SF1-202ENST00000334944 HSD17B6O14756 317 aa11.99□□□□□ -0.49
SF1-202ENST00000334944 TUBG1P23258 451 aa11.99□□□□□ -0.49
SF1-202ENST00000334944 RND3P61587 244 aa11.99□□□□□ -0.49
SF1-202ENST00000334944 FAM3AP98173 230 aa11.99□□□□□ -0.49
SF1-202ENST00000334944 SP6Q3SY56 376 aa11.99□□□□□ -0.49
SF1-202ENST00000334944 WDR25Q64LD2 544 aaPredicted RBP11.99□□□□□ -0.49
SF1-202ENST00000334944 DIRC2Q96SL1 478 aa11.99□□□□□ -0.49
SF1-202ENST00000334944 FOXJ2Q9P0K8 574 aa11.99□□□□□ -0.49
SF1-202ENST00000334944 A0A096LPE4 126 aa11.99□□□□□ -0.49
SF1-202ENST00000334944 A0A1W2PPZ6 126 aa11.99□□□□□ -0.49
SF1-202ENST00000334944 C19orf67A6NJJ6 358 aa11.99□□□□□ -0.49
SF1-202ENST00000334944 M0R143 59 aa11.99□□□□□ -0.49
SF1-202ENST00000334944 ZNF705AQ6ZN79 300 aaPredicted RBP11.99□□□□□ -0.49
SF1-202ENST00000334944 SLC35G3Q8N808 338 aa11.99□□□□□ -0.49
SF1-202ENST00000334944 DTWD2Q8NBA8 298 aa11.99□□□□□ -0.49
SF1-202ENST00000334944 NOL4LQ96MY1 436 aaPredicted RBP11.99□□□□□ -0.49
SF1-202ENST00000334944 FAAP24Q9BTP7 215 aa11.99□□□□□ -0.49
SF1-202ENST00000334944 TMED3Q9Y3Q3 217 aa11.99□□□□□ -0.49
SF1-202ENST00000334944 NBEAQ8NFP9 2946 aa11.99□□□□□ -0.49
SF1-202ENST00000334944 IGKV1-27A0A075B6S5 117 aa11.98□□□□□ -0.49
SF1-202ENST00000334944 FAM166BA8MTA8 275 aa11.98□□□□□ -0.49
SF1-202ENST00000334944 VAMP5O95183 116 aa11.98□□□□□ -0.49
SF1-202ENST00000334944 TAS2R31P59538 309 aa11.98□□□□□ -0.49
SF1-202ENST00000334944 RAC3P60763 192 aa11.98□□□□□ -0.49
SF1-202ENST00000334944 LINC00696Q6ZRV3 163 aa11.98□□□□□ -0.49
SF1-202ENST00000334944 NECAP1Q8NC96 275 aa11.98□□□□□ -0.49
SF1-202ENST00000334944 SSC4DQ8WTU2 575 aa11.98□□□□□ -0.49
SF1-202ENST00000334944 SPTSSAQ969W0 71 aa11.98□□□□□ -0.49
SF1-202ENST00000334944 PECRQ9BY49 303 aa11.98□□□□□ -0.49
SF1-202ENST00000334944 PLEKHJ1Q9NW61 149 aa11.98□□□□□ -0.49
SF1-202ENST00000334944 TCF21O43680 179 aa11.98□□□□□ -0.49
SF1-202ENST00000334944 CEACAM6P40199 344 aa11.98□□□□□ -0.49
SF1-202ENST00000334944 TFPI2P48307 235 aa11.98□□□□□ -0.49
SF1-202ENST00000334944 CYB561P49447 251 aa11.98□□□□□ -0.49
SF1-202ENST00000334944 IL15RAQ13261 267 aa11.98□□□□□ -0.49
SF1-202ENST00000334944 ARSJQ5FYB0 599 aaPredicted RBP11.98□□□□□ -0.49
SF1-202ENST00000334944 C6orf15Q6UXA7 325 aaPredicted RBP11.98□□□□□ -0.49
SF1-202ENST00000334944 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.98□□□□□ -0.49
SF1-202ENST00000334944 DMXL1Q9Y485 3027 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 A0A1W2PNU3 283 aaPredicted RBP11.97□□□□□ -0.49
SF1-202ENST00000334944 RBFOX3A6NFN3 312 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 DHRS7CA6NNS2 312 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 C3orf80F5H4A9 247 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 GSTP1P09211 210 aaKnown RBP11.97□□□□□ -0.49
SF1-202ENST00000334944 OMGP23515 440 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 FOXG1P55316 489 aaPredicted RBP11.97□□□□□ -0.49
SF1-202ENST00000334944 C3AR1Q16581 482 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 PRSS8Q16651 343 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 FAM27BQ5VT28 67 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 SGCZQ96LD1 299 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 SIGLEC12Q96PQ1 595 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 LRFN1Q9P244 771 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 ZNF716A6NP11 495 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 CD33P20138 364 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 FKBP2P26885 142 aaKnown RBP11.97□□□□□ -0.49
SF1-202ENST00000334944 SRD5A2P31213 254 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 MPLP40238 635 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 PSG4Q00888 419 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 P2RY6Q15077 328 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 PIGYQ3MUY2 71 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 BEND2Q8NDZ0 799 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 ELOVL1Q9BW60 279 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 FBLN5Q9UBX5 448 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 ZNF107Q9UII5 783 aaPredicted RBP11.97□□□□□ -0.49
SF1-202ENST00000334944 V9GYS6 101 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 SVILO95425 2214 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 LNP1A1A4G5 178 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 SELEP16581 610 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 PTGER4P35408 488 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 MRPS11P82912 194 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms