RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 CALHM2Q9HA72 323 aa15.74■□□□□ 0.11
PKP3-201ENST00000331563 NECAP2Q9NVZ3 263 aa15.74■□□□□ 0.11
PKP3-201ENST00000331563 TTC28Q96AY4 2481 aa15.74■□□□□ 0.11
PKP3-201ENST00000331563 PPP5D1E7EU14 171 aa15.74■□□□□ 0.11
PKP3-201ENST00000331563 BIDP55957 195 aa15.74■□□□□ 0.11
PKP3-201ENST00000331563 HLA-DQA1Q5Y7H0 255 aa15.74■□□□□ 0.11
PKP3-201ENST00000331563 NUFIP2Q7Z417 695 aaKnown RBP15.74■□□□□ 0.11
PKP3-201ENST00000331563 ZNF100Q8IYN0 542 aa15.74■□□□□ 0.11
PKP3-201ENST00000331563 C18orf12Q96KH6 178 aa15.74■□□□□ 0.11
PKP3-201ENST00000331563 KCNK17Q96T54 332 aa15.74■□□□□ 0.11
PKP3-201ENST00000331563 PLEKHF2Q9H8W4 249 aa15.74■□□□□ 0.11
PKP3-201ENST00000331563 PCNX3Q9H6A9 2034 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 MS4A18H0YCH9 400 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 CD55P08174 381 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 TFPI2P48307 235 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 PDLIM4P50479 330 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 ERVS71-1P61550 626 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 IGLV3-21P80748 117 aaPredicted RBP15.73■□□□□ 0.11
PKP3-201ENST00000331563 ADIRFQ15847 76 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 MS4A18Q3C1V0 323 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 TSLPQ969D9 159 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 ALKBH3Q96Q83 286 aaPredicted RBP15.73■□□□□ 0.11
PKP3-201ENST00000331563 SRD5A3Q9H8P0 318 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 MSL2Q9HCI7 577 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 FER1L5A0AVI2 2057 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 LOC102723971A0A1B0GUV8 181 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 NKX2-6A6NCS4 301 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 CIDEAO60543 219 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 NPIPB7O75200 414 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 LCATP04180 440 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 CDAP32320 146 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 FAM90A2PQ658T7 463 aa15.73■□□□□ 0.11
PKP3-201ENST00000331563 ANOS1P23352 680 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 RAB7AP51149 207 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 SELENOTP62341 195 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 GRINAQ7Z429 371 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 LRP11Q86VZ4 500 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 TMEM252Q8N6L7 170 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 PIGTQ969N2 578 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 ACY3Q96HD9 319 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 WFIKKN1Q96NZ8 548 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 GLRX2Q9NS18 164 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 A0A1W2PN81 502 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 NKX6-3A6NJ46 265 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 K7EP13 123 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 ZNF17P17021 662 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 CHRNA7P36544 502 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 EFNA3P52797 238 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 PTTG1IPP53801 180 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 PLCXD2Q0VAA5 305 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 RTL6Q6ICC9 239 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 LCN15Q6UWW0 184 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 OIT3Q8WWZ8 545 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 ANGPTL4Q9BY76 406 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 MOB1AQ9H8S9 216 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 IGHV1OR21-1A0A087WYE8 117 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 TRBV11-1A0A0K0K1C0 115 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 UMODP07911 640 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 OR10J1P30954 320 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 ARL4DP49703 201 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 MSI2Q96DH6 328 aaKnown RBP15.72■□□□□ 0.11
PKP3-201ENST00000331563 SLC46A1Q96NT5 459 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 MIEN1Q9BRT3 115 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 NAGKQ9UJ70 344 aa15.72■□□□□ 0.11
PKP3-201ENST00000331563 PHF3Q92576 2039 aaKnown RBP15.71■□□□□ 0.11
PKP3-201ENST00000331563 MYO7BQ6PIF6 2116 aa15.71■□□□□ 0.11
PKP3-201ENST00000331563 LILRA5A6NI73 299 aa15.71■□□□□ 0.11
PKP3-201ENST00000331563 RER1O15258 196 aa15.71■□□□□ 0.11
PKP3-201ENST00000331563 FOXF1Q12946 379 aa15.71■□□□□ 0.11
PKP3-201ENST00000331563 H1FNTQ75WM6 255 aaPredicted RBP15.71■□□□□ 0.11
PKP3-201ENST00000331563 DOK3Q7L591 496 aa15.71■□□□□ 0.11
PKP3-201ENST00000331563 SMIM15Q7Z3B0 74 aa15.71■□□□□ 0.11
PKP3-201ENST00000331563 SLC24A4Q8NFF2 622 aa15.71■□□□□ 0.11
PKP3-201ENST00000331563 PTPMT1Q8WUK0 201 aaPredicted RBP15.71■□□□□ 0.11
PKP3-201ENST00000331563 ZNF665Q9H7R5 613 aa15.71■□□□□ 0.11
PKP3-201ENST00000331563 ASPMQ8IZT6 3477 aa15.71■□□□□ 0.1
PKP3-201ENST00000331563 CCL25O15444 150 aa15.71■□□□□ 0.1
PKP3-201ENST00000331563 TSPAN2O60636 221 aa15.71■□□□□ 0.1
PKP3-201ENST00000331563 KLF3P57682 345 aaPredicted RBP15.71■□□□□ 0.1
PKP3-201ENST00000331563 C17orf82Q86X59 251 aaPredicted RBP15.71■□□□□ 0.1
PKP3-201ENST00000331563 OR4D5Q8NGN0 318 aa15.71■□□□□ 0.1
PKP3-201ENST00000331563 SDF2L1Q9HCN8 221 aa15.71■□□□□ 0.1
PKP3-201ENST00000331563 C2orf72A6NCS6 295 aa15.7■□□□□ 0.1
PKP3-201ENST00000331563 FRG2CA6NGY1 282 aa15.7■□□□□ 0.1
PKP3-201ENST00000331563 CHRNB4P30926 498 aa15.7■□□□□ 0.1
PKP3-201ENST00000331563 FGF8P55075 233 aaPredicted RBP15.7■□□□□ 0.1
PKP3-201ENST00000331563 MRPS34P82930 218 aaKnown RBP15.7■□□□□ 0.1
PKP3-201ENST00000331563 RNF151Q2KHN1 245 aa15.7■□□□□ 0.1
PKP3-201ENST00000331563 CARD17Q5XLA6 110 aa15.7■□□□□ 0.1
PKP3-201ENST00000331563 BRICD5Q6PL45 260 aa15.7■□□□□ 0.1
PKP3-201ENST00000331563 OR1L3Q8NH93 324 aa15.7■□□□□ 0.1
PKP3-201ENST00000331563 OR5B12Q96R08 314 aa15.7■□□□□ 0.1
PKP3-201ENST00000331563 PARD6GQ9BYG4 376 aaPredicted RBP15.7■□□□□ 0.1
PKP3-201ENST00000331563 LHFPL6Q9Y693 200 aa15.7■□□□□ 0.1
PKP3-201ENST00000331563 FOXI3A8MTJ6 420 aaPredicted RBP15.7■□□□□ 0.1
PKP3-201ENST00000331563 ZNF705FA8MVS1 300 aaPredicted RBP15.7■□□□□ 0.1
PKP3-201ENST00000331563 PROB1E7EW31 1015 aa15.7■□□□□ 0.1
PKP3-201ENST00000331563 MSTNO14793 375 aa15.7■□□□□ 0.1
PKP3-201ENST00000331563 HLA-HP01893 362 aa15.7■□□□□ 0.1
PKP3-201ENST00000331563 ZNF705DP0CH99 300 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms