RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 MAP1LC3BQ9GZQ8 125 aa21.04■□□□□ 0.96
SOX1-201ENST00000330949 OR51I2Q9H344 312 aa21.04■□□□□ 0.96
SOX1-201ENST00000330949 VDAC3Q9Y277 283 aa21.04■□□□□ 0.96
SOX1-201ENST00000330949 GRB2P62993 217 aaKnown RBP21.03■□□□□ 0.96
SOX1-201ENST00000330949 OR5I1Q13606 314 aa21.03■□□□□ 0.96
SOX1-201ENST00000330949 ACSF3Q4G176 576 aaPredicted RBP21.03■□□□□ 0.96
SOX1-201ENST00000330949 MRPL13Q9BYD1 178 aaKnown RBP21.03■□□□□ 0.96
SOX1-201ENST00000330949 ZNF286AQ9HBT8 521 aa21.03■□□□□ 0.96
SOX1-201ENST00000330949 ADAM20O43506 726 aa21.03■□□□□ 0.96
SOX1-201ENST00000330949 KBTBD11O94819 623 aa21.03■□□□□ 0.96
SOX1-201ENST00000330949 SEMA4FO95754 770 aa21.03■□□□□ 0.96
SOX1-201ENST00000330949 IL6RP08887 468 aaPredicted RBP21.03■□□□□ 0.96
SOX1-201ENST00000330949 CLRN1P58418 232 aa21.03■□□□□ 0.96
SOX1-201ENST00000330949 ID3Q02535 119 aa21.03■□□□□ 0.96
SOX1-201ENST00000330949 RLN3Q8WXF3 142 aa21.03■□□□□ 0.96
SOX1-201ENST00000330949 PIGTQ969N2 578 aa21.03■□□□□ 0.96
SOX1-201ENST00000330949 PCED1AQ9H1Q7 454 aa21.03■□□□□ 0.96
SOX1-201ENST00000330949 YLPM1P49750 1951 aaKnown RBP21.02■□□□□ 0.96
SOX1-201ENST00000330949 SIAH2O43255 324 aa21.02■□□□□ 0.96
SOX1-201ENST00000330949 LCATP04180 440 aa21.02■□□□□ 0.96
SOX1-201ENST00000330949 IGKV3-11P04433 115 aa21.02■□□□□ 0.96
SOX1-201ENST00000330949 FGF8P55075 233 aaPredicted RBP21.02■□□□□ 0.96
SOX1-201ENST00000330949 ZCCHC14Q8WYQ9 949 aaKnown RBP21.02■□□□□ 0.96
SOX1-201ENST00000330949 FAM131CQ96AQ9 280 aa21.02■□□□□ 0.96
SOX1-201ENST00000330949 ANAPC16Q96DE5 110 aa21.02■□□□□ 0.96
SOX1-201ENST00000330949 PNRC2Q9NPJ4 139 aaKnown RBP21.02■□□□□ 0.96
SOX1-201ENST00000330949 RANP62826 216 aaKnown RBP21.02■□□□□ 0.96
SOX1-201ENST00000330949 CLEC18AA5D8T8 446 aa21.01■□□□□ 0.95
SOX1-201ENST00000330949 DHRS3O75911 302 aa21.01■□□□□ 0.95
SOX1-201ENST00000330949 RPL23P62829 140 aaKnown RBP21.01■□□□□ 0.95
SOX1-201ENST00000330949 CLEC18CQ8NCF0 446 aa21.01■□□□□ 0.95
SOX1-201ENST00000330949 OR2J1Q9GZK6 312 aa21.01■□□□□ 0.95
SOX1-201ENST00000330949 RBKSQ9H477 322 aa21.01■□□□□ 0.95
SOX1-201ENST00000330949 CHST1O43916 411 aa21.01■□□□□ 0.95
SOX1-201ENST00000330949 TNFSF13O75888 250 aa21.01■□□□□ 0.95
SOX1-201ENST00000330949 HLA-HP01893 362 aa21.01■□□□□ 0.95
SOX1-201ENST00000330949 FAHP16930 419 aa21.01■□□□□ 0.95
SOX1-201ENST00000330949 CDAP32320 146 aa21.01■□□□□ 0.95
SOX1-201ENST00000330949 TNFSF10P50591 281 aa21.01■□□□□ 0.95
SOX1-201ENST00000330949 EXT1Q16394 746 aa21.01■□□□□ 0.95
SOX1-201ENST00000330949 FBXW9Q5XUX1 488 aa21.01■□□□□ 0.95
SOX1-201ENST00000330949 UEVLDQ8IX04 471 aa21.01■□□□□ 0.95
SOX1-201ENST00000330949 ELOVL1Q9BW60 279 aa21.01■□□□□ 0.95
SOX1-201ENST00000330949 SOHLH2Q9NX45 425 aa21.01■□□□□ 0.95
SOX1-201ENST00000330949 ZFP30Q9Y2G7 519 aa21.01■□□□□ 0.95
SOX1-201ENST00000330949 CCDC163A0A0D9SF12 145 aa21■□□□□ 0.95
SOX1-201ENST00000330949 DUXBA0A1W2PPF3 345 aa21■□□□□ 0.95
SOX1-201ENST00000330949 AADACP22760 399 aa21■□□□□ 0.95
SOX1-201ENST00000330949 SRP14P37108 136 aaKnown RBP21■□□□□ 0.95
SOX1-201ENST00000330949 SCGB1C1Q8TD33 95 aa21■□□□□ 0.95
SOX1-201ENST00000330949 ZNF721Q8TF20 911 aa21■□□□□ 0.95
SOX1-201ENST00000330949 SIGLEC12Q96PQ1 595 aa21■□□□□ 0.95
SOX1-201ENST00000330949 PARD6AQ9NPB6 346 aa21■□□□□ 0.95
SOX1-201ENST00000330949 SERINC1Q9NRX5 453 aa21■□□□□ 0.95
SOX1-201ENST00000330949 TNFRSF10CO14798 259 aa21■□□□□ 0.95
SOX1-201ENST00000330949 SELEP16581 610 aa21■□□□□ 0.95
SOX1-201ENST00000330949 NPBWR2P48146 333 aa21■□□□□ 0.95
SOX1-201ENST00000330949 HYAL1Q12794 435 aa21■□□□□ 0.95
SOX1-201ENST00000330949 ZNF726P1Q15940 193 aa21■□□□□ 0.95
SOX1-201ENST00000330949 COL5A1-AS1Q5SY13 56 aa21■□□□□ 0.95
SOX1-201ENST00000330949 SELENOHQ8IZQ5 122 aaKnown RBP21■□□□□ 0.95
SOX1-201ENST00000330949 POC1BQ8TC44 478 aa21■□□□□ 0.95
SOX1-201ENST00000330949 LYZL4Q96KX0 146 aa21■□□□□ 0.95
SOX1-201ENST00000330949 WFIKKN1Q96NZ8 548 aa21■□□□□ 0.95
SOX1-201ENST00000330949 NUDT22Q9BRQ3 303 aa21■□□□□ 0.95
SOX1-201ENST00000330949 TCF21O43680 179 aa21■□□□□ 0.95
SOX1-201ENST00000330949 IGLV3-1P01715 115 aa21■□□□□ 0.95
SOX1-201ENST00000330949 ZNF92Q03936 586 aa21■□□□□ 0.95
SOX1-201ENST00000330949 CLEC12BQ2HXU8 276 aa21■□□□□ 0.95
SOX1-201ENST00000330949 SDSLQ96GA7 329 aa21■□□□□ 0.95
SOX1-201ENST00000330949 MRGPRX4Q96LA9 322 aa21■□□□□ 0.95
SOX1-201ENST00000330949 E9PLN8 166 aa20.99■□□□□ 0.95
SOX1-201ENST00000330949 DDAH2O95865 285 aa20.99■□□□□ 0.95
SOX1-201ENST00000330949 UMODP07911 640 aa20.99■□□□□ 0.95
SOX1-201ENST00000330949 GABRG2P18507 467 aa20.99■□□□□ 0.95
SOX1-201ENST00000330949 WNT5AP41221 380 aa20.99■□□□□ 0.95
SOX1-201ENST00000330949 TMEM150CB9EJG8 249 aa20.99■□□□□ 0.95
SOX1-201ENST00000330949 IGHG1P01857 330 aa20.99■□□□□ 0.95
SOX1-201ENST00000330949 FOXL2P58012 376 aa20.99■□□□□ 0.95
SOX1-201ENST00000330949 KIAA2026Q5HYC2 2103 aa20.99■□□□□ 0.95
SOX1-201ENST00000330949 KCNIP4Q6PIL6 250 aa20.99■□□□□ 0.95
SOX1-201ENST00000330949 PSMG3Q9BT73 122 aaPredicted RBP20.99■□□□□ 0.95
SOX1-201ENST00000330949 RSG1Q9BU20 258 aa20.99■□□□□ 0.95
SOX1-201ENST00000330949 ASCC3Q8N3C0 2202 aaKnown RBP20.98■□□□□ 0.95
SOX1-201ENST00000330949 FRYLO94915 3013 aa20.98■□□□□ 0.95
SOX1-201ENST00000330949 LRRC3CA6NJW4 275 aa20.98■□□□□ 0.95
SOX1-201ENST00000330949 IFNL4K9M1U5 179 aa20.98■□□□□ 0.95
SOX1-201ENST00000330949 PPYP01298 95 aa20.98■□□□□ 0.95
SOX1-201ENST00000330949 VDAC1P21796 283 aa20.98■□□□□ 0.95
SOX1-201ENST00000330949 MEF2BQ02080 365 aaPredicted RBP20.98■□□□□ 0.95
SOX1-201ENST00000330949 DDIT4LQ96D03 193 aa20.98■□□□□ 0.95
SOX1-201ENST00000330949 GPR35Q9HC97 309 aa20.98■□□□□ 0.95
SOX1-201ENST00000330949 CHD3Q12873 2000 aaKnown RBP20.98■□□□□ 0.95
SOX1-201ENST00000330949 ZNF737O75373 536 aa20.98■□□□□ 0.95
SOX1-201ENST00000330949 LCN2P80188 198 aa20.98■□□□□ 0.95
SOX1-201ENST00000330949 TRA2AQ13595 282 aaKnown RBP eCLIP20.98■□□□□ 0.95
SOX1-201ENST00000330949 NMSQ5H8A3 153 aa20.98■□□□□ 0.95
SOX1-201ENST00000330949 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.98■□□□□ 0.95
SOX1-201ENST00000330949 ST8SIA1Q92185 356 aa20.98■□□□□ 0.95
SOX1-201ENST00000330949 PIGLQ9Y2B2 252 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms