RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 HSD17B6O14756 317 aa12.4□□□□□ -0.42
TPM3-206ENST00000330188 CD82P27701 267 aa12.4□□□□□ -0.42
TPM3-206ENST00000330188 ID4P47928 161 aa12.4□□□□□ -0.42
TPM3-206ENST00000330188 Q6ZRG5 221 aa12.4□□□□□ -0.42
TPM3-206ENST00000330188 PIP4P1Q86T03 277 aa12.4□□□□□ -0.42
TPM3-206ENST00000330188 ZNF695Q8IW36 515 aa12.4□□□□□ -0.42
TPM3-206ENST00000330188 LILRB1Q8NHL6 650 aaPredicted RBP12.4□□□□□ -0.42
TPM3-206ENST00000330188 NRIP2Q9BQI9 281 aa12.4□□□□□ -0.42
TPM3-206ENST00000330188 DLL3Q9NYJ7 618 aa12.4□□□□□ -0.42
TPM3-206ENST00000330188 CDRT15L2A8MXV6 281 aa12.4□□□□□ -0.43
TPM3-206ENST00000330188 J3QW42 95 aa12.4□□□□□ -0.43
TPM3-206ENST00000330188 SMPD2O60906 423 aa12.4□□□□□ -0.43
TPM3-206ENST00000330188 IGHV1-2P23083 117 aa12.4□□□□□ -0.43
TPM3-206ENST00000330188 F2RL1P55085 397 aa12.4□□□□□ -0.43
TPM3-206ENST00000330188 NHLH2Q02577 135 aa12.4□□□□□ -0.43
TPM3-206ENST00000330188 SRSF6Q13247 344 aaKnown RBP12.4□□□□□ -0.43
TPM3-206ENST00000330188 GINS3Q9BRX5 216 aa12.4□□□□□ -0.43
TPM3-206ENST00000330188 ADAT1Q9BUB4 502 aaKnown RBP12.4□□□□□ -0.43
TPM3-206ENST00000330188 SEC11CQ9BY50 192 aa12.4□□□□□ -0.43
TPM3-206ENST00000330188 IFT22Q9H7X7 185 aa12.4□□□□□ -0.43
TPM3-206ENST00000330188 CLCF1Q9UBD9 225 aa12.4□□□□□ -0.43
TPM3-206ENST00000330188 BORCS7-ASMTA0A0B4J1R7 106 aa12.39□□□□□ -0.43
TPM3-206ENST00000330188 A0A1W2PR80 420 aa12.39□□□□□ -0.43
TPM3-206ENST00000330188 NKX2-8O15522 239 aa12.39□□□□□ -0.43
TPM3-206ENST00000330188 SEC11BP0C7V7 166 aa12.39□□□□□ -0.43
TPM3-206ENST00000330188 UCP1P25874 307 aa12.39□□□□□ -0.43
TPM3-206ENST00000330188 HLA-DRB3P79483 266 aa12.39□□□□□ -0.43
TPM3-206ENST00000330188 GNMTQ14749 295 aa12.39□□□□□ -0.43
TPM3-206ENST00000330188 Q6P435 159 aa12.39□□□□□ -0.43
TPM3-206ENST00000330188 WDR86Q86TI4 376 aa12.39□□□□□ -0.43
TPM3-206ENST00000330188 SPAG16Q8N0X2 631 aa12.39□□□□□ -0.43
TPM3-206ENST00000330188 LYPD6BQ8NI32 183 aa12.39□□□□□ -0.43
TPM3-206ENST00000330188 DUXBA0A1W2PPF3 345 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 TOR1AO14656 332 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 IGHG3P01860 377 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 SPP1P10451 314 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 PPP1CBP62140 327 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 ZNF324BQ6AW86 544 aaPredicted RBP12.38□□□□□ -0.43
TPM3-206ENST00000330188 CLRN3Q8NCR9 226 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 BOD1Q96IK1 185 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 SPIN2AQ99865 258 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 SPIN2BQ9BPZ2 258 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 CABLES2Q9BTV7 478 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 RTL8AQ9BWD3 113 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 OR2J1Q9GZK6 312 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 FAM212BQ9NTI7 297 aaPredicted RBP12.38□□□□□ -0.43
TPM3-206ENST00000330188 PURGQ9UJV8 347 aaKnown RBP12.38□□□□□ -0.43
TPM3-206ENST00000330188 RNASEK-C17orf49H0YIS7 233 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 DEGS1O15121 323 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 ADAM20O43506 726 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 F12P00748 615 aaPredicted RBP12.38□□□□□ -0.43
TPM3-206ENST00000330188 CD5P06127 495 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 OR8U9P0C7N5 309 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 ZNF44P15621 663 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 NKX2-1P43699 371 aaPredicted RBP12.38□□□□□ -0.43
TPM3-206ENST00000330188 IDH3GP51553 393 aaPredicted RBP12.38□□□□□ -0.43
TPM3-206ENST00000330188 UBE2NP61088 152 aaKnown RBP12.38□□□□□ -0.43
TPM3-206ENST00000330188 ERVS71-1P61550 626 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 POLR2GP62487 172 aaKnown RBP eCLIP12.38□□□□□ -0.43
TPM3-206ENST00000330188 EWSR1Q01844 656 aaKnown RBP eCLIP12.38□□□□□ -0.43
TPM3-206ENST00000330188 SWI5Q1ZZU3 235 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 NMSQ5H8A3 153 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 FAM76BQ5HYJ3 339 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 GCNT2Q8N0V5 402 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 SUMF1Q8NBK3 374 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 OR8U1Q8NH10 309 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 GLRX2Q9NS18 164 aa12.38□□□□□ -0.43
TPM3-206ENST00000330188 LRP5LA4QPB2 252 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 CLEC18AA5D8T8 446 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 AGPAT2O15120 278 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 PGLYRP1O75594 196 aaPredicted RBP12.37□□□□□ -0.43
TPM3-206ENST00000330188 DANCRP0C864 163 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 CCL11P51671 97 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 MRPL49Q13405 166 aaKnown RBP12.37□□□□□ -0.43
TPM3-206ENST00000330188 CMTM1Q8IZ96 169 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 H1FOOQ8IZA3 346 aaPredicted RBP12.37□□□□□ -0.43
TPM3-206ENST00000330188 OR2C3Q8N628 320 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 SCCPDHQ8NBX0 429 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 CLEC18CQ8NCF0 446 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 FDCSPQ8NFU4 85 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 OR5D13Q8NGL4 314 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 PARP12Q9H0J9 701 aaKnown RBP12.37□□□□□ -0.43
TPM3-206ENST00000330188 CDH20Q9HBT6 801 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 OR2W1Q9Y3N9 320 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 FAM24AA6NFZ4 105 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 H0Y980 276 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 TNFSF12O43508 249 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 LYZL6O75951 148 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 WISP2O76076 250 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 TGFBR3Q03167 851 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 DEFB124Q8NES8 71 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 OR10J5Q8NHC4 309 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 ABHD14BQ96IU4 210 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 KIRREL1Q96J84 757 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 TRIB1Q96RU8 372 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 SH3BGRL3Q9H299 93 aa12.37□□□□□ -0.43
TPM3-206ENST00000330188 IGSF23A1L1A6 192 aa12.36□□□□□ -0.43
TPM3-206ENST00000330188 FAM157AC9JC47 383 aa12.36□□□□□ -0.43
TPM3-206ENST00000330188 C9JQL5 133 aa12.36□□□□□ -0.43
TPM3-206ENST00000330188 SNAPINO95295 136 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms