RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 IGKV1D-13A0A0B4J2D9 117 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 A0A1W2PPZ6 126 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 SLC22A20A6NK97 555 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 PRSS44E7EML9 344 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 PROB1E7EW31 1015 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 UBE2CO00762 179 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 ZNHIT1O43257 154 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 ARG1P05089 322 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 IGKV1-13P0DP09 117 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 CCL2P13500 99 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 RAB5AP20339 215 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 FAM24BQ8N5W8 94 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 ZFP62Q8NB50 900 aaPredicted RBP13.17□□□□□ -0.3
BRCC3-201ENST00000330045 LILRB1Q8NHL6 650 aaPredicted RBP13.17□□□□□ -0.3
BRCC3-201ENST00000330045 TMEM171Q8WVE6 324 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 ABHD14BQ96IU4 210 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 SMDT1Q9H4I9 107 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 CRIM1Q9NZV1 1036 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 DUXBA0A1W2PPF3 345 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 C5orf49A4QMS7 147 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 HSPB6O14558 160 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 HSPA12AO43301 675 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 ZNF14P17017 642 aaPredicted RBP13.16□□□□□ -0.3
BRCC3-201ENST00000330045 B2MP61769 119 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 HERPUD1Q15011 391 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 CEACAM21Q3KPI0 293 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 SOHLH1Q5JUK2 328 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 MRPL21Q7Z2W9 205 aaKnown RBP13.16□□□□□ -0.3
BRCC3-201ENST00000330045 ZDHHC23Q8IYP9 409 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 SUMF2Q8NBJ7 301 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 NEK7Q8TDX7 302 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 ABHD14AQ9BUJ0 271 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 IL36RNQ9UBH0 155 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 KMT2EQ8IZD2 1858 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 PCSK5Q92824 1860 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 KIR2DS1A0A191URI9 304 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 CLEC18AA5D8T8 446 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 HSD17B6O14756 317 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 TUSC2O75896 110 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 CBR1P16152 277 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 VDAC1P21796 283 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 UCP1P25874 307 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 KIR2DS4P43632 304 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 CCL20P78556 96 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 KIR2DS1Q14954 304 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 TSC22D1Q15714 1073 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 MPV17LQ2QL34 196 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 DCAF12Q5T6F0 453 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 DHRS13Q6UX07 377 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 CLEC18CQ8NCF0 446 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 OR5C1Q8NGR4 320 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 LINC00470Q9BZP3 86 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 MTCH1Q9NZJ7 389 aa13.16□□□□□ -0.3
BRCC3-201ENST00000330045 PCNX2A6NKB5 2137 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 IGKV3D-15A0A087WSY6 115 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 hCG_1809904A0A1W2PP81 198 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 A0A1W2PPE2 198 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 A0A1W2PPE3 182 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 A0A1W2PR64 198 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 A0A1W2PRV1 198 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 RBFOX3A6NFN3 312 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 CDRT15L2A8MXV6 281 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 ZNF732B4DXR9 585 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 TRAPPC2LH3BP13 241 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 HLA-HP01893 362 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 S100A8P05109 93 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 SERPINA7P05543 415 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 HOXB1P14653 301 aaPredicted RBP13.15□□□□□ -0.3
BRCC3-201ENST00000330045 RAB1AP62820 205 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 ID3Q02535 119 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 SRYQ05066 204 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 SSPNQ14714 243 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 NMSQ5H8A3 153 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 SPINK14Q6IE38 97 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 SIGLEC12Q96PQ1 595 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 CCL28Q9NRJ3 127 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 GLRX2Q9NS18 164 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 FOXJ2Q9P0K8 574 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 PUS1Q9Y606 427 aaKnown RBP eCLIP13.15□□□□□ -0.3
BRCC3-201ENST00000330045 ATP23Q9Y6H3 246 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 B4E171 279 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 CST7O76096 145 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 CTXN2P0C2S0 81 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 ITGA3P26006 1051 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 TSPAN7P41732 249 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 DYNLT3P51808 116 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 SPSB3Q6PJ21 355 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 MKXQ8IYA7 352 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 CMTM1Q8IZ96 169 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 IL22RA1Q8N6P7 574 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 OR8G5Q8NG78 346 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 LOXL4Q96JB6 756 aa13.15□□□□□ -0.3
BRCC3-201ENST00000330045 BOKQ9UMX3 212 aaPredicted RBP13.15□□□□□ -0.3
BRCC3-201ENST00000330045 IGKV1-6A0A0C4DH72 117 aa13.14□□□□□ -0.31
BRCC3-201ENST00000330045 C9orf172C9J069 976 aa13.14□□□□□ -0.31
BRCC3-201ENST00000330045 TMEM50AO95807 157 aa13.14□□□□□ -0.31
BRCC3-201ENST00000330045 MMP9P14780 707 aa13.14□□□□□ -0.31
BRCC3-201ENST00000330045 ADAM5Q6NVV9 412 aa13.14□□□□□ -0.31
BRCC3-201ENST00000330045 ODF3L1Q8IXM7 274 aa13.14□□□□□ -0.31
BRCC3-201ENST00000330045 CT55Q8WUE5 264 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms