RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 UBE2MP61081 183 aaKnown RBP13.78□□□□□ -0.2
PDLIM1-201ENST00000329399 IKZF1Q13422 519 aa13.78□□□□□ -0.2
PDLIM1-201ENST00000329399 C11orf91Q3C1V1 193 aa13.78□□□□□ -0.2
PDLIM1-201ENST00000329399 ATAD3CQ5T2N8 411 aa13.78□□□□□ -0.2
PDLIM1-201ENST00000329399 GLDNQ6ZMI3 551 aaPredicted RBP13.78□□□□□ -0.2
PDLIM1-201ENST00000329399 WDR86Q86TI4 376 aa13.78□□□□□ -0.2
PDLIM1-201ENST00000329399 OR4S1Q8NGB4 309 aa13.78□□□□□ -0.2
PDLIM1-201ENST00000329399 OR4D10Q8NGI6 311 aa13.78□□□□□ -0.2
PDLIM1-201ENST00000329399 TERB2Q8NHR7 220 aa13.78□□□□□ -0.2
PDLIM1-201ENST00000329399 HPS1Q92902 700 aa13.78□□□□□ -0.2
PDLIM1-201ENST00000329399 SLC6A7Q99884 636 aa13.78□□□□□ -0.2
PDLIM1-201ENST00000329399 BPESC1Q9GZL8 116 aa13.78□□□□□ -0.2
PDLIM1-201ENST00000329399 MED28Q9H204 178 aa13.78□□□□□ -0.2
PDLIM1-201ENST00000329399 OR51J1Q9H342 316 aa13.78□□□□□ -0.2
PDLIM1-201ENST00000329399 ING3Q9NXR8 418 aa13.78□□□□□ -0.2
PDLIM1-201ENST00000329399 IL19Q9UHD0 177 aa13.78□□□□□ -0.2
PDLIM1-201ENST00000329399 ANXA10Q9UJ72 324 aa13.78□□□□□ -0.2
PDLIM1-201ENST00000329399 FBXO9Q9UK97 447 aaPredicted RBP13.78□□□□□ -0.2
PDLIM1-201ENST00000329399 A0A0A6YYJ9 748 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 A0A0B4J293 547 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 M0QYG6 137 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 WNT9BO14905 357 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 DEGS1O15121 323 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 ARPC1BO15143 372 aaKnown RBP13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 SPRY3O43610 288 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 IGHV1-46P01743 117 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 GRPP07492 148 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 FCGR3AP08637 254 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 CTXN2P0C2S0 81 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 TAS2R31P59538 309 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 ARPC4P59998 168 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 TSPAN5P62079 268 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 MAB21L1Q13394 359 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 MICBQ29980 383 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 OVCH2Q7RTZ1 564 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 GIMAP1Q8WWP7 306 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 PPA2Q9H2U2 334 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 FN3KRPQ9HA64 309 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 NECAP2Q9NVZ3 263 aa13.77□□□□□ -0.21
PDLIM1-201ENST00000329399 KIR2DS1A0A191URI9 304 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 UBE2QL1A1L167 161 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 F5H5P2 479 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 H0YL77 283 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 CREBL2O60519 120 aaPredicted RBP13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 KNG1P01042 644 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 HEXAP06865 529 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 LMO1P25800 156 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 IL2RGP31785 369 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 KIR2DS4P43632 304 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 ZNF81P51508 661 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 KIR2DS1Q14954 304 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 SMIM21Q3B7S5 101 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 FAM209AQ5JX71 171 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 OR52W1Q6IF63 320 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 FAAP20Q6NZ36 180 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 MOB1BQ7L9L4 216 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 C11orf53Q8IXP5 236 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 OR2Z1Q8NG97 314 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 ELMOD3Q96FG2 381 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 ZNF221Q9UK13 617 aa13.76□□□□□ -0.21
PDLIM1-201ENST00000329399 TMEM82A0PJX8 343 aa13.75□□□□□ -0.21
PDLIM1-201ENST00000329399 A6NLC8 198 aa13.75□□□□□ -0.21
PDLIM1-201ENST00000329399 RP2O75695 350 aa13.75□□□□□ -0.21
PDLIM1-201ENST00000329399 RHBDL1O75783 438 aa13.75□□□□□ -0.21
PDLIM1-201ENST00000329399 NAPSAO96009 420 aa13.75□□□□□ -0.21
PDLIM1-201ENST00000329399 SLC25A16P16260 332 aa13.75□□□□□ -0.21
PDLIM1-201ENST00000329399 HOXB4P17483 251 aaPredicted RBP13.75□□□□□ -0.21
PDLIM1-201ENST00000329399 USF1P22415 310 aaPredicted RBP13.75□□□□□ -0.21
PDLIM1-201ENST00000329399 LOXL1Q08397 574 aaPredicted RBP13.75□□□□□ -0.21
PDLIM1-201ENST00000329399 TMEM249Q2WGJ8 235 aa13.75□□□□□ -0.21
PDLIM1-201ENST00000329399 SCGB2B2Q4G0G5 96 aa13.75□□□□□ -0.21
PDLIM1-201ENST00000329399 OR6F1Q8NGZ6 308 aa13.75□□□□□ -0.21
PDLIM1-201ENST00000329399 ASB13Q8WXK3 278 aa13.75□□□□□ -0.21
PDLIM1-201ENST00000329399 DCAF16Q9NXF7 216 aa13.75□□□□□ -0.21
PDLIM1-201ENST00000329399 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.75□□□□□ -0.214e-6■■□□□ 13.3
PDLIM1-201ENST00000329399 F8VVB4 439 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 F8VWA3 439 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 DIRAS3O95661 229 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 PMP2P02689 132 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 RLN1P04808 185 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 CD55P08174 381 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 Q6P435 159 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 DHRS11Q6UWP2 260 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 WDR82Q6UXN9 313 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 SLC36A1Q7Z2H8 476 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 LHFPL1Q86WI0 220 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 TCTE3Q8IZS6 198 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 SUMF2Q8NBJ7 301 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 MEGF10Q96KG7 1140 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 PIMREGQ9BSJ6 248 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 DPCDQ9BVM2 203 aaPredicted RBP13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 CHMP1AQ9HD42 196 aaPredicted RBP13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 INAFM1C9JVW0 142 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 TNFRSF1AP19438 455 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 GLRA1P23415 457 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 ZNF626Q68DY1 528 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 C11orf88Q6PI97 169 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 ACP7Q6ZNF0 438 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 SPICQ8N5J4 248 aa13.74□□□□□ -0.21
PDLIM1-201ENST00000329399 OR13C8Q8NGS7 320 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms