RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 H3F3AP84243 136 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 ZFP62Q8NB50 900 aaPredicted RBP9.94□□□□□ -0.82
COL4A5-201ENST00000328300 OR10AD1Q8NGE0 317 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 FAM122AQ96E09 287 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 CACNG5Q9UF02 275 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 MRPS18BQ9Y676 258 aaKnown RBP9.94□□□□□ -0.82
COL4A5-201ENST00000328300 CHCHD2Q9Y6H1 151 aaPredicted RBP9.94□□□□□ -0.82
COL4A5-201ENST00000328300 AGFG2O95081 481 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 CELA2AP08217 269 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 OR4A8P0C604 315 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 HNF1AP20823 631 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 ZP3P21754 424 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 GNG10P50151 68 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 INSL4Q14641 139 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 KHDC1LQ5JSQ8 128 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 FADS6Q8N9I5 356 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 ADAT3Q96EY9 351 aaPredicted RBP9.94□□□□□ -0.82
COL4A5-201ENST00000328300 OR51I2Q9H344 312 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 KLF4O43474 513 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 NQO2P16083 231 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 SNX22Q96L94 193 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 MRPL22Q9NWU5 206 aaKnown RBP9.94□□□□□ -0.82
COL4A5-201ENST00000328300 CLN8Q9UBY8 286 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 OR5AC1P0C628 307 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 ZFP36L1Q07352 338 aaKnown RBP9.94□□□□□ -0.82
COL4A5-201ENST00000328300 LCN15Q6UWW0 184 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 ZNF66Q6ZN08 573 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 TBC1D26Q86UD7 250 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 C17orf82Q86X59 251 aaPredicted RBP9.94□□□□□ -0.82
COL4A5-201ENST00000328300 TGIF2LYQ8IUE0 185 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 TGIF2LXQ8IUE1 241 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 TMEM105Q8N8V8 129 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 MIXL1Q9H2W2 232 aa9.94□□□□□ -0.82
COL4A5-201ENST00000328300 DOCK3Q8IZD9 2030 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 SOCS1O15524 211 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 GPR6P46095 362 aaPredicted RBP9.93□□□□□ -0.82
COL4A5-201ENST00000328300 RPL7L1Q6DKI1 246 aaKnown RBP9.93□□□□□ -0.82
COL4A5-201ENST00000328300 CLEC9AQ6UXN8 241 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 TRAV8-7A0A075B6U6 113 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 C3orf80F5H4A9 247 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 TMPRSS2O15393 492 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 ZNF658BQ4V348 819 aaPredicted RBP9.93□□□□□ -0.82
COL4A5-201ENST00000328300 UNQ9370/PRO34162Q6UXP9 181 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 SAT2Q96F10 170 aaPredicted RBP9.93□□□□□ -0.82
COL4A5-201ENST00000328300 Q9N2K0 584 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 NTN3O00634 580 aaPredicted RBP9.93□□□□□ -0.82
COL4A5-201ENST00000328300 GLI4P10075 376 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 ETV3LQ6ZN32 361 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 TMEM123Q8N131 208 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 OR2J1Q9GZK6 312 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 MMP26Q9NRE1 261 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 SYNGR2O43760 224 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 COX6B1P14854 86 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 UBE2L5PA0A1B0GUS4 154 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 F2RL2O00254 374 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 PRDX2P32119 198 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 MC5RP33032 325 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 SRP14P37108 136 aaKnown RBP9.93□□□□□ -0.82
COL4A5-201ENST00000328300 Q56UQ5 140 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 UBTD1Q9HAC8 227 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 SH2D2AQ9NP31 389 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 FAM206AQ9NX38 181 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 KLHDC2Q9Y2U9 406 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 V9GYS6 101 aa9.93□□□□□ -0.82
COL4A5-201ENST00000328300 Q6ZT83 130 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 TMEM18Q96B42 140 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 TVP23CQ96ET8 276 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 RLFQ13129 1914 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 DPPA3Q6W0C5 159 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 RFESDQ8TAC1 157 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 SMIM7Q9BQ49 75 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 SLC25A10Q9UBX3 287 aaPredicted RBP9.92□□□□□ -0.82
COL4A5-201ENST00000328300 LRRC3CA6NJW4 275 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 NANOS3P60323 173 aaKnown RBP9.92□□□□□ -0.82
COL4A5-201ENST00000328300 SEZ6L2Q6UXD5 910 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 LRRTM1Q86UE6 522 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 NECAP1Q8NC96 275 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 CABLES2Q9BTV7 478 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 OPN3Q9H1Y3 402 aaPredicted RBP9.92□□□□□ -0.82
COL4A5-201ENST00000328300 TMEM167BQ9NRX6 74 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 LGALS7P47929 136 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 ZNF90Q03938 601 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 CLEC18BQ6UXF7 455 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 LINC00114Q6XXX2 140 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 FLVCR1-AS1Q8TAF5 88 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 ZNF586Q9NXT0 402 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 GON4LQ3T8J9 2241 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 NTN1O95631 604 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 OPRK1P41145 380 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 RASL11BQ9BPW5 248 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 IL17BQ9UHF5 180 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 LHFPL6Q9Y693 200 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 SDK1Q7Z5N4 2213 aa9.92□□□□□ -0.82
COL4A5-201ENST00000328300 ZNF574Q6ZN55 896 aaPredicted RBP9.91□□□□□ -0.82
COL4A5-201ENST00000328300 UBAC2Q8NBM4 344 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 STXBP6Q8NFX7 210 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 FLYWCH2Q96CP2 140 aaKnown RBP9.91□□□□□ -0.82
COL4A5-201ENST00000328300 ACY3Q96HD9 319 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 ATP5SQ99766 215 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 TPPP3Q9BW30 176 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms