RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 NKX3-1Q99801 234 aaPredicted RBP4.29□□□□□ -1.72
LRIT3-201ENST00000327908 RNF5Q99942 180 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 CLEC7AQ9BXN2 247 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 SLIRPQ9GZT3 109 aaKnown RBP4.29□□□□□ -1.72
LRIT3-201ENST00000327908 CALYQ9NYX4 217 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 PIPOXQ9P0Z9 390 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 IGHV4-30-2A0A087WSY4 118 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 GEMIN2O14893 280 aaKnown RBP4.29□□□□□ -1.72
LRIT3-201ENST00000327908 LY86O95711 162 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 INHBBP09529 407 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 ZBTB25P24278 435 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 OR10A3P58181 314 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 UNC119Q13432 240 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 VAX1Q5SQQ9 334 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 AVPI1Q5T686 147 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 FAM131AQ6UXB0 335 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 BTN2A1Q7KYR7 527 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 MRGPRDQ8TDS7 321 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 S1PR3Q99500 378 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 GFI1Q99684 422 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 GINS4Q9BRT9 223 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 PCGF1Q9BSM1 259 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 BANF2Q9H503 90 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 Q9N2K0 584 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 ZNF69Q9UC07 566 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 ZNF221Q9UK13 617 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 PITPNC1Q9UKF7 332 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 EPG5Q9HCE0 2579 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 TRAV24A0A0B4J272 114 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 TMEM82A0PJX8 343 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 A8MV72 311 aaPredicted RBP4.29□□□□□ -1.72
LRIT3-201ENST00000327908 FABP7O15540 132 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 AKAIN1P0CW23 69 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 CDK2P24941 298 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 RAB13P51153 203 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 UBE2E1P51965 193 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 UCP3P55916 312 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 SRPXP78539 464 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 SCN1BQ07699 218 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 CATR1Q13166 79 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 IL18Q14116 193 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 RNASE10Q5GAN6 216 aaKnown RBP4.29□□□□□ -1.72
LRIT3-201ENST00000327908 CADM3Q8N126 398 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 CD300LFQ8TDQ1 290 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 GPX8Q8TED1 209 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 CAPSLQ8WWF8 208 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 SLC25A38Q96DW6 304 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 SPACA5Q96QH8 159 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 MTFP1Q9UDX5 166 aa4.29□□□□□ -1.72
LRIT3-201ENST00000327908 MRPS7Q9Y2R9 242 aaKnown RBP4.29□□□□□ -1.72
LRIT3-201ENST00000327908 A6NIN4 97 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 LEUTXA8MZ59 168 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 H3BSH0 61 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 M0QZK8 103 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 HSPA12AO43301 675 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 LANCL1O43813 399 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 TOX4O94842 621 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 CLEC2LP0C7M8 214 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 IGHV4-31P0DP07 118 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 NPBWR2P48146 333 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 DYNLT3P51808 116 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 DHRS7BQ6IAN0 325 aaPredicted RBP4.28□□□□□ -1.72
LRIT3-201ENST00000327908 RBMS3Q6XE24 437 aaKnown RBP4.28□□□□□ -1.72
LRIT3-201ENST00000327908 ZNF841Q6ZN19 808 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 CCDC190Q86UF4 302 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 OR4S1Q8NGB4 309 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 OR10K1Q8NGX5 313 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 OR10J5Q8NHC4 309 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 GCDHQ92947 438 aaPredicted RBP4.28□□□□□ -1.72
LRIT3-201ENST00000327908 TMUB1Q9BVT8 246 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 SHARPINQ9H0F6 387 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 PPA2Q9H2U2 334 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 DPAGT1Q9H3H5 408 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 GFOD1Q9NXC2 390 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 MAB21L2Q9Y586 359 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 IGSF10Q6WRI0 2623 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 IGHV3OR15-7A0A075B7D8 119 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 IGHV4-61A0A0C4DH41 118 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 FAM172BPA6NC97 362 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 KIAA1324LA8MWY0 1029 aaPredicted RBP4.28□□□□□ -1.72
LRIT3-201ENST00000327908 FCGR3AP08637 254 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 SLC2A2P11168 524 aaPredicted RBP4.28□□□□□ -1.72
LRIT3-201ENST00000327908 SRP14P37108 136 aaKnown RBP4.28□□□□□ -1.72
LRIT3-201ENST00000327908 PIGYQ3MUY2 71 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 PYDC2Q56P42 97 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 C17orf107Q6ZR85 190 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 OR11H6Q8NGC7 330 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 MRPL30Q8TCC3 161 aaKnown RBP4.28□□□□□ -1.72
LRIT3-201ENST00000327908 ZNF418Q8TF45 676 aaPredicted RBP4.28□□□□□ -1.72
LRIT3-201ENST00000327908 CCDC107Q8WV48 283 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 ZFAND2BQ8WV99 257 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 SNAPC3Q92966 411 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 ARHGAP5-AS1Q96IT6 56 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 SLC25A21Q9BQT8 299 aaPredicted RBP4.28□□□□□ -1.72
LRIT3-201ENST00000327908 PPIL3Q9H2H8 161 aaKnown RBP4.28□□□□□ -1.72
LRIT3-201ENST00000327908 TMEM133Q9H2Q1 129 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 ABCB10Q9NRK6 738 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 ONECUT1Q9UBC0 465 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 GNG12Q9UBI6 72 aa4.28□□□□□ -1.72
LRIT3-201ENST00000327908 AK3Q9UIJ7 227 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms