RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 POC5Q8NA72 575 aa8.52□□□□□ -1.04
VIPAS39-201ENST00000327028 MAFIPQ8WZ33 124 aa8.52□□□□□ -1.04
VIPAS39-201ENST00000327028 CEACAM18A8MTB9 384 aa8.52□□□□□ -1.05
VIPAS39-201ENST00000327028 LYRM1O43325 122 aa8.52□□□□□ -1.05
VIPAS39-201ENST00000327028 CD3DP04234 171 aa8.52□□□□□ -1.05
VIPAS39-201ENST00000327028 HLA-DMAP28067 261 aa8.52□□□□□ -1.05
VIPAS39-201ENST00000327028 ERP29P30040 261 aaKnown RBP8.52□□□□□ -1.05
VIPAS39-201ENST00000327028 FAUP35544 74 aaKnown RBP8.52□□□□□ -1.05
VIPAS39-201ENST00000327028 TAS2R46P59540 309 aa8.52□□□□□ -1.05
VIPAS39-201ENST00000327028 STEAP1BQ6NZ63 245 aa8.52□□□□□ -1.05
VIPAS39-201ENST00000327028 GDPD3Q7L5L3 318 aa8.52□□□□□ -1.05
VIPAS39-201ENST00000327028 SPICQ8N5J4 248 aa8.52□□□□□ -1.05
VIPAS39-201ENST00000327028 OR4K15Q8NH41 348 aa8.52□□□□□ -1.05
VIPAS39-201ENST00000327028 C11orf54Q9H0W9 315 aaPredicted RBP8.52□□□□□ -1.05
VIPAS39-201ENST00000327028 NCOR1P1Q9H4R4 102 aa8.52□□□□□ -1.05
VIPAS39-201ENST00000327028 ING3Q9NXR8 418 aa8.52□□□□□ -1.05
VIPAS39-201ENST00000327028 CTSZQ9UBR2 303 aa8.52□□□□□ -1.05
VIPAS39-201ENST00000327028 KIF25Q9UIL4 384 aa8.52□□□□□ -1.05
VIPAS39-201ENST00000327028 MGAT4AQ9UM21 535 aa8.52□□□□□ -1.05
VIPAS39-201ENST00000327028 IGKV1D-8A0A087WSZ0 117 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 FUOMA2VDF0 154 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 NAP1L6A6NFF2 107 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 CENPXA8MT69 81 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 NDUFB3O43676 98 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 SSX4O60224 188 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 EDDM3AQ14507 147 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 RGS21Q2M5E4 152 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 OR4C16Q8NGL9 310 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 HRASLSQ9HDD0 168 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 MBNL3Q9NUK0 354 aaKnown RBP8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 BEX4Q9NWD9 120 aaPredicted RBP8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 SLC25A10Q9UBX3 287 aaPredicted RBP8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 ANXA10Q9UJ72 324 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 MEIKINA0A087WXM9 373 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 KIR2DS1A0A191URI9 304 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 RAB3DO95716 219 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 PTTG1O95997 202 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 KIR2DS4P43632 304 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 GLIPR1P48060 266 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 HLA-DRB3P79483 266 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 MEF2DQ14814 521 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 KIR2DS1Q14954 304 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 LRRC10Q5BKY1 277 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 RNASE10Q5GAN6 216 aaKnown RBP8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 MZT2BQ6NZ67 158 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 OR5H2Q8NGV7 314 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 PERPQ96FX8 193 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 MIOXQ9UGB7 285 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 TRAPPC2LQ9UL33 140 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 ANKRD17O75179 2603 aaKnown RBP8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 CELSR2Q9HCU4 2923 aa8.51□□□□□ -1.05
VIPAS39-201ENST00000327028 ODAMA1E959 279 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 TRDCB7Z8K6 153 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 M0QYG6 137 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 NDUFS8O00217 210 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 DVL1O14640 695 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 FCN3O75636 299 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 RPS2P15880 293 aaKnown RBP8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 RCC1P18754 421 aaPredicted RBP8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 HRH1P35367 487 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 ARPC4P59998 168 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 CHRFAM7AQ494W8 412 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 VAX1Q5SQQ9 334 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 TRAT1Q6PIZ9 186 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 OR5AP2Q8NGF4 316 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 CCDC107Q8WV48 283 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 NEIL1Q96FI4 390 aaPredicted RBP8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 DSCAML1Q8TD84 2053 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 UNC79Q9P2D8 2635 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 F5H0A9 414 aaPredicted RBP8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 DNASE1P24855 282 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 BTCP35070 178 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 EDDM3BP56851 147 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 CDK10Q15131 360 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 HMGN3Q15651 99 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 C6orf183Q5T699 404 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 CLEC2AQ6UVW9 174 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 NLRC3Q7RTR2 1065 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 ZNF554Q86TJ5 538 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 FGFRL1Q8N441 504 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 TPRX1Q8N7U7 411 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 OR8B3Q8NGG8 313 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 OR4D10Q8NGI6 311 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 OR8B2Q96RD0 313 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 PIMREGQ9BSJ6 248 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 TINAGL1Q9GZM7 467 aaPredicted RBP8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 POLQO75417 2590 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 FABP7O15540 132 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 PMP2P02689 132 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 NDUFB7P17568 137 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 RFX2P48378 723 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 FAAP20Q6NZ36 180 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 ZNF841Q6ZN19 808 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 OR13A1Q8NGR1 328 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 C10orf105Q8TEF2 133 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 FAM168AQ92567 244 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 MBD6Q96DN6 1003 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 PATZ1Q9HBE1 687 aaKnown RBP8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 OR6C3Q9NZP0 311 aa8.5□□□□□ -1.05
VIPAS39-201ENST00000327028 APCP25054 2843 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms