RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 F8W036 122 aa13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 ZNHIT1O43257 154 aa13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 LILRA1O75019 489 aa13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 SPP1P10451 314 aa13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 MUC1P15941 1255 aaPredicted RBP13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 AKR1C2P52895 323 aa13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 AKR1C1Q04828 323 aa13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 DHRS7BQ6IAN0 325 aaPredicted RBP13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 MDP1Q86V88 176 aa13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 FAM58AQ8N1B3 248 aa13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 BATF2Q8N1L9 274 aa13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 COMMD1Q8N668 190 aa13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 ZNF565Q8N9K5 539 aa13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 GMPPAQ96IJ6 420 aaPredicted RBP13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 SPIN2AQ99865 258 aa13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 SPIN2BQ9BPZ2 258 aa13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 CABLES2Q9BTV7 478 aa13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 TREM2Q9NZC2 230 aa13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 RCL1Q9Y2P8 373 aaKnown RBP13.48□□□□□ -0.25
SMARCD2-202ENST00000323347 FREM1Q5H8C1 2179 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 TRAV24A0A0B4J272 114 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 NPIPB11E5RHQ5 1161 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 RNASEK-C17orf49H0YIS7 233 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 J3QT63 122 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 NUPL2O15504 423 aaKnown RBP13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 DANCRP0C864 163 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 ZNF14P17017 642 aaPredicted RBP13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 LMO1P25800 156 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 POLR2GP62487 172 aaKnown RBP eCLIP13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 TSC22D1Q15714 1073 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 ZNF818PQ6ZRF7 136 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 TREM1Q9NP99 234 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 R4GN57 208 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 IGKV1D-13A0A0B4J2D9 117 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 NKX2-6A6NCS4 301 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 FAM157AC9JC47 383 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 IGHG3P01860 377 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 IGKV1-13P0DP09 117 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 MMP9P14780 707 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 RAB5CP51148 216 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 NMSQ5H8A3 153 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 ZNF324BQ6AW86 544 aaPredicted RBP13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 Q6P435 159 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 GAPTQ8N292 157 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 BOD1Q96IK1 185 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 SMIM3Q9BZL3 60 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 C12orf49Q9H741 205 aa13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 UBE2J1Q9Y385 318 aaPredicted RBP13.47□□□□□ -0.25
SMARCD2-202ENST00000323347 ARHGAP21Q5T5U3 1957 aa13.46□□□□□ -0.25
SMARCD2-202ENST00000323347 PIGBOS1A0A0B4J2F0 54 aa13.46□□□□□ -0.25
SMARCD2-202ENST00000323347 ARGFXA6NJG6 315 aa13.46□□□□□ -0.25
SMARCD2-202ENST00000323347 SNAPINO95295 136 aa13.46□□□□□ -0.25
SMARCD2-202ENST00000323347 GLI4P10075 376 aa13.46□□□□□ -0.25
SMARCD2-202ENST00000323347 TNFSF10P50591 281 aa13.46□□□□□ -0.25
SMARCD2-202ENST00000323347 DVL1P1P54792 670 aaPredicted RBP13.46□□□□□ -0.25
SMARCD2-202ENST00000323347 ERVK11-1P61568 191 aa13.46□□□□□ -0.25
SMARCD2-202ENST00000323347 ARG2P78540 354 aa13.46□□□□□ -0.25
SMARCD2-202ENST00000323347 GNMTQ14749 295 aa13.46□□□□□ -0.25
SMARCD2-202ENST00000323347 TBC1D28Q2M2D7 210 aa13.46□□□□□ -0.25
SMARCD2-202ENST00000323347 PIP4P1Q86T03 277 aa13.46□□□□□ -0.25
SMARCD2-202ENST00000323347 ZNF695Q8IW36 515 aa13.46□□□□□ -0.25
SMARCD2-202ENST00000323347 OR5D13Q8NGL4 314 aa13.46□□□□□ -0.25
SMARCD2-202ENST00000323347 SECTM1Q8WVN6 248 aa13.46□□□□□ -0.25
SMARCD2-202ENST00000323347 DLL3Q9NYJ7 618 aa13.46□□□□□ -0.25
SMARCD2-202ENST00000323347 SHANK1Q9Y566 2161 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 H0Y980 276 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 ACAA1P09110 424 aaPredicted RBP13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 VDAC1P21796 283 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 MDH2P40926 338 aaKnown RBP13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 HLA-DRB3P79483 266 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 ID3Q02535 119 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 OR2T2Q6IF00 324 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 C20orf204Q6ZNR8 217 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 Q6ZRG5 221 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 C5orf24Q7Z6I8 188 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 H1FOOQ8IZA3 346 aaPredicted RBP13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 CLCF1Q9UBD9 225 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 STRAPQ9Y3F4 350 aaKnown RBP13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 CNTRLQ7Z7A1 2325 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 LRP5LA4QPB2 252 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 NKX2-1P43699 371 aaPredicted RBP13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 GUSBP1Q15486 140 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 TRIP6Q15654 476 aaKnown RBP13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 ATP1A1-AS1Q5TC04 95 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 MEX3BQ6ZN04 569 aaKnown RBP13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 Q8IYB0 196 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 CMTM1Q8IZ96 169 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 OR2C3Q8N628 320 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 NEK7Q8TDX7 302 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 RTL8AQ9BWD3 113 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 SCRT1Q9BWW7 348 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 CCL28Q9NRJ3 127 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 OR2W1Q9Y3N9 320 aa13.45□□□□□ -0.26
SMARCD2-202ENST00000323347 EPG5Q9HCE0 2579 aa13.44□□□□□ -0.26
SMARCD2-202ENST00000323347 CDRT15L2A8MXV6 281 aa13.44□□□□□ -0.26
SMARCD2-202ENST00000323347 PGLYRP1O75594 196 aaPredicted RBP13.44□□□□□ -0.26
SMARCD2-202ENST00000323347 HEXAP06865 529 aa13.44□□□□□ -0.26
SMARCD2-202ENST00000323347 SLC25A6P12236 298 aa13.44□□□□□ -0.26
SMARCD2-202ENST00000323347 CA6P23280 308 aa13.44□□□□□ -0.26
SMARCD2-202ENST00000323347 NOVA1P51513 510 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms