RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 HTR3BO95264 441 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 CLIC3O95833 236 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 MPIG6BO95866 241 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 RPSAP08865 295 aaKnown RBP9.79□□□□□ -0.84
TPM3-204ENST00000323144 SERPINA2P20848 420 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 MNDAP41218 407 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 REG1BP48304 166 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 LOXL3P58215 753 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 DOC2BQ14184 412 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 RSU1Q15404 277 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 CCDC144NLQ6NUI1 221 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 CENPVQ7Z7K6 275 aaPredicted RBP9.79□□□□□ -0.84
TPM3-204ENST00000323144 ZNF329Q86UD4 541 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 OSR2Q8N2R0 312 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 ZFP41Q8N8Y5 198 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 SUMF2Q8NBJ7 301 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 STMN2Q93045 179 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 TMEM106AQ96A25 262 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 DPCDQ9BVM2 203 aaPredicted RBP9.79□□□□□ -0.84
TPM3-204ENST00000323144 S100A14Q9HCY8 104 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 PSG11Q9UQ72 335 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 PSMB11A5LHX3 300 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 FAM90A18PA6NE21 464 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 FAM90A16PA6NEW6 464 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 FAM90A20PA6NIJ5 464 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 FAM90A9PA6NNJ1 464 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 FAM90A12PA8MX19 464 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 FAM90A5PA8MXJ8 464 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 OOSP1A8MZH6 123 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 NPIPB11E5RHQ5 1161 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 HSD17B6O14756 317 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 GEMIN2O14893 280 aaKnown RBP9.78□□□□□ -0.84
TPM3-204ENST00000323144 MPZL2O60487 215 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 IGKV1D-33P01593 117 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 IGKV1-33P01594 117 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 FAM90A15PP0C7V4 464 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 FAM90A13PP0C7W8 464 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 FAM90A14PP0C7W9 464 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 FAM90A24PP0C7X0 464 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 TMEM11P17152 192 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 HOXD3P31249 432 aaPredicted RBP9.78□□□□□ -0.84
TPM3-204ENST00000323144 PRRX1P54821 245 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 KRTAP10-11P60412 298 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 SLC35A2P78381 396 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 PAX5Q02548 391 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 MRPL28Q13084 256 aaKnown RBP9.78□□□□□ -0.84
TPM3-204ENST00000323144 HES1Q14469 280 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 LINC00482Q8N8I6 264 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 GPR148Q8TDV2 347 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 CREB3L1Q96BA8 519 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 CPNE2Q96FN4 548 aaPredicted RBP9.78□□□□□ -0.84
TPM3-204ENST00000323144 LINC00574Q9H8X3 128 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 FGF20Q9NP95 211 aaPredicted RBP9.78□□□□□ -0.84
TPM3-204ENST00000323144 MRPS18AQ9NVS2 196 aaKnown RBP9.78□□□□□ -0.84
TPM3-204ENST00000323144 LINC00527Q9UJ94 153 aa9.78□□□□□ -0.84
TPM3-204ENST00000323144 TRAV8-7A0A075B6U6 113 aa9.77□□□□□ -0.85
TPM3-204ENST00000323144 IGHV3-43A0A0B4J1X8 118 aa9.77□□□□□ -0.85
TPM3-204ENST00000323144 IGHV3-72A0A0B4J1Y9 119 aa9.77□□□□□ -0.85
TPM3-204ENST00000323144 OR7C1O76099 320 aaPredicted RBP9.77□□□□□ -0.85
TPM3-204ENST00000323144 IGHV3-43DP0DP04 118 aa9.77□□□□□ -0.85
TPM3-204ENST00000323144 PPP3R1P63098 170 aa9.77□□□□□ -0.85
TPM3-204ENST00000323144 MADCAM1Q13477 382 aa9.77□□□□□ -0.85
TPM3-204ENST00000323144 HNF4GQ14541 408 aa9.77□□□□□ -0.85
TPM3-204ENST00000323144 C11orf87Q6NUJ2 197 aa9.77□□□□□ -0.85
TPM3-204ENST00000323144 ASCL4Q6XD76 172 aa9.77□□□□□ -0.85
TPM3-204ENST00000323144 WFDC9Q8NEX5 89 aa9.77□□□□□ -0.85
TPM3-204ENST00000323144 Q8NFD4 153 aa9.77□□□□□ -0.85
TPM3-204ENST00000323144 SMIM19Q96E16 107 aa9.77□□□□□ -0.85
TPM3-204ENST00000323144 Q96MT0 163 aa9.77□□□□□ -0.85
TPM3-204ENST00000323144 PCDHB16Q9NRJ7 776 aa9.77□□□□□ -0.85
TPM3-204ENST00000323144 SMPD3Q9NY59 655 aaPredicted RBP9.77□□□□□ -0.85
TPM3-204ENST00000323144 IL36GQ9NZH8 169 aa9.77□□□□□ -0.85
TPM3-204ENST00000323144 CLEC2DQ9UHP7 191 aa9.77□□□□□ -0.85
TPM3-204ENST00000323144 ST3GAL6Q9Y274 331 aa9.77□□□□□ -0.85
TPM3-204ENST00000323144 RPL36Q9Y3U8 105 aaKnown RBP9.77□□□□□ -0.85
TPM3-204ENST00000323144 WI2-2373I1.2A0A1W2PRP0 233 aa9.76□□□□□ -0.85
TPM3-204ENST00000323144 TMEM30CPA0ZSE6 113 aa9.76□□□□□ -0.85
TPM3-204ENST00000323144 C15orf65H3BRN8 121 aa9.76□□□□□ -0.85
TPM3-204ENST00000323144 M0QZK8 103 aa9.76□□□□□ -0.85
TPM3-204ENST00000323144 SLC31A2O15432 143 aa9.76□□□□□ -0.85
TPM3-204ENST00000323144 MAGEB3O15480 346 aa9.76□□□□□ -0.85
TPM3-204ENST00000323144 CD2P06729 351 aa9.76□□□□□ -0.85
TPM3-204ENST00000323144 ZNF93P35789 620 aaPredicted RBP9.76□□□□□ -0.85
TPM3-204ENST00000323144 RPL23AP62750 156 aaKnown RBP9.76□□□□□ -0.85
TPM3-204ENST00000323144 NHLRC3Q5JS37 347 aa9.76□□□□□ -0.85
TPM3-204ENST00000323144 RPL22L1Q6P5R6 122 aaKnown RBP9.76□□□□□ -0.85
TPM3-204ENST00000323144 C8orf86Q6ZUL3 223 aa9.76□□□□□ -0.85
TPM3-204ENST00000323144 OR2W3Q7Z3T1 314 aa9.76□□□□□ -0.85
TPM3-204ENST00000323144 OR8H3Q8N146 312 aa9.76□□□□□ -0.85
TPM3-204ENST00000323144 OR10X1Q8NGY0 326 aa9.76□□□□□ -0.85
TPM3-204ENST00000323144 CCDC107Q8WV48 283 aa9.76□□□□□ -0.85
TPM3-204ENST00000323144 PGLYRP3Q96LB9 341 aa9.76□□□□□ -0.85
TPM3-204ENST00000323144 ZNF184Q99676 751 aaPredicted RBP9.76□□□□□ -0.85
TPM3-204ENST00000323144 IFT22Q9H7X7 185 aa9.76□□□□□ -0.85
TPM3-204ENST00000323144 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.76□□□□□ -0.85
TPM3-204ENST00000323144 ING4Q9UNL4 249 aa9.76□□□□□ -0.85
TPM3-204ENST00000323144 IGHV1-3A0A0C4DH29 117 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 TRBV5-5A0A0J9YX44 114 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 PNMA8CA0A1B0GUJ8 204 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 SDCBPO00560 298 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms