RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 A6NLC8 198 aa14.39□□□□□ -0.11
SSR4-201ENST00000320857 BCL2L11O43521 198 aa14.39□□□□□ -0.11
SSR4-201ENST00000320857 TUSC2O75896 110 aa14.39□□□□□ -0.11
SSR4-201ENST00000320857 OR5AC1P0C628 307 aa14.39□□□□□ -0.11
SSR4-201ENST00000320857 ALKBH2Q6NS38 261 aa14.39□□□□□ -0.11
SSR4-201ENST00000320857 C11orf53Q8IXP5 236 aa14.39□□□□□ -0.11
SSR4-201ENST00000320857 DCUN1D4Q92564 292 aa14.39□□□□□ -0.11
SSR4-201ENST00000320857 SNRNP40Q96DI7 357 aaKnown RBP14.39□□□□□ -0.11
SSR4-201ENST00000320857 USB1Q9BQ65 265 aaKnown RBP14.39□□□□□ -0.11
SSR4-201ENST00000320857 GSX2Q9BZM3 304 aa14.39□□□□□ -0.11
SSR4-201ENST00000320857 FBXO9Q9UK97 447 aaPredicted RBP14.39□□□□□ -0.11
SSR4-201ENST00000320857 ZNF835Q9Y2P0 537 aa14.39□□□□□ -0.11
SSR4-201ENST00000320857 SPENQ96T58 3664 aaKnown RBP14.38□□□□□ -0.11
SSR4-201ENST00000320857 IGHV3-64DA0A0J9YX35 117 aa14.38□□□□□ -0.11
SSR4-201ENST00000320857 RPS10-NUDT3A0A1W2PQS6 291 aa14.38□□□□□ -0.11
SSR4-201ENST00000320857 C3orf80F5H4A9 247 aa14.38□□□□□ -0.11
SSR4-201ENST00000320857 HAND1O96004 215 aa14.38□□□□□ -0.11
SSR4-201ENST00000320857 BMP5P22003 454 aa14.38□□□□□ -0.11
SSR4-201ENST00000320857 NUP62P37198 522 aaPredicted RBP14.38□□□□□ -0.11
SSR4-201ENST00000320857 RND3P61587 244 aa14.38□□□□□ -0.11
SSR4-201ENST00000320857 HERPUD1Q15011 391 aa14.38□□□□□ -0.11
SSR4-201ENST00000320857 PRSS54Q6PEW0 395 aa14.38□□□□□ -0.11
SSR4-201ENST00000320857 LIAT1Q6ZQX7 453 aa14.38□□□□□ -0.11
SSR4-201ENST00000320857 MRGPRGQ86SM5 289 aa14.38□□□□□ -0.11
SSR4-201ENST00000320857 LGI3Q8N145 548 aa14.38□□□□□ -0.11
SSR4-201ENST00000320857 LRTM2Q8N967 370 aa14.38□□□□□ -0.11
SSR4-201ENST00000320857 SCARB1Q8WTV0 552 aa14.38□□□□□ -0.11
SSR4-201ENST00000320857 CABLES2Q9BTV7 478 aa14.38□□□□□ -0.11
SSR4-201ENST00000320857 RNF126Q9BV68 326 aa14.38□□□□□ -0.11
SSR4-201ENST00000320857 MSL2Q9HCI7 577 aa14.38□□□□□ -0.11
SSR4-201ENST00000320857 PKD1L2Q7Z442 2459 aa14.38□□□□□ -0.11
SSR4-201ENST00000320857 ANKRD34BA5PLL1 514 aa14.37□□□□□ -0.11
SSR4-201ENST00000320857 MPTX1A8MV57 137 aa14.37□□□□□ -0.11
SSR4-201ENST00000320857 GPR31O00270 319 aa14.37□□□□□ -0.11
SSR4-201ENST00000320857 LYL1P12980 280 aa14.37□□□□□ -0.11
SSR4-201ENST00000320857 ZNF250P15622 560 aa14.37□□□□□ -0.11
SSR4-201ENST00000320857 GLRXP35754 106 aa14.37□□□□□ -0.11
SSR4-201ENST00000320857 RPS23P62266 143 aaKnown RBP14.37□□□□□ -0.11
SSR4-201ENST00000320857 SRPXP78539 464 aa14.37□□□□□ -0.11
SSR4-201ENST00000320857 IL15RAQ13261 267 aa14.37□□□□□ -0.11
SSR4-201ENST00000320857 IAH1Q2TAA2 248 aaPredicted RBP14.37□□□□□ -0.11
SSR4-201ENST00000320857 GGNBP1Q5YKI7 109 aa14.37□□□□□ -0.11
SSR4-201ENST00000320857 ZNF497Q6ZNH5 498 aa14.37□□□□□ -0.11
SSR4-201ENST00000320857 C20orf204Q6ZNR8 217 aa14.37□□□□□ -0.11
SSR4-201ENST00000320857 SLC5A7Q9GZV3 580 aa14.37□□□□□ -0.11
SSR4-201ENST00000320857 ELOVL5Q9NYP7 299 aa14.37□□□□□ -0.11
SSR4-201ENST00000320857 GSKIPQ9P0R6 139 aa14.37□□□□□ -0.11
SSR4-201ENST00000320857 IGKV1-6A0A0C4DH72 117 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 A0A0G2JNJ9 132 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 MPPED1O15442 326 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 KCNJ3P48549 501 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 SP6Q3SY56 376 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 PRAMEF6Q5VXH4 476 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 GAPTQ8N292 157 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 OR11L1Q8NGX0 322 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 OR10J5Q8NHC4 309 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 PLPPR1Q8TBJ4 325 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 SECTM1Q8WVN6 248 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 MRPL24Q96A35 216 aaKnown RBP14.36□□□□□ -0.11
SSR4-201ENST00000320857 ASF1BQ9NVP2 202 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 TAAR3PQ9P1P4 343 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 Q9UFV3 132 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 KIF25Q9UIL4 384 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 ITPR1Q14643 2758 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 NPIPB11E5RHQ5 1161 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 PHF1O43189 567 aaPredicted RBP14.36□□□□□ -0.11
SSR4-201ENST00000320857 IGHV3-13P01766 116 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 RCC1P18754 421 aaPredicted RBP14.36□□□□□ -0.11
SSR4-201ENST00000320857 GNRHRP30968 328 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 CD200P41217 278 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 RBPJQ06330 500 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 FAM27E3Q08E93 113 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 LY6DQ14210 128 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 PCSK4Q6UW60 755 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 WDR82Q6UXN9 313 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 ACP7Q6ZNF0 438 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 ZNF826PQ6ZT77 177 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 KIRREL1Q96J84 757 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 ARPC5LQ9BPX5 153 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 OR14J1Q9UGF5 321 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 DUSP13Q9UII6 198 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 TRAPPC2LQ9UL33 140 aa14.36□□□□□ -0.11
SSR4-201ENST00000320857 ATMQ13315 3056 aa14.35□□□□□ -0.11
SSR4-201ENST00000320857 NBEAQ8NFP9 2946 aa14.35□□□□□ -0.11
SSR4-201ENST00000320857 C3orf85A0A1B0GTC6 90 aa14.35□□□□□ -0.11
SSR4-201ENST00000320857 H0YIZ8 118 aa14.35□□□□□ -0.11
SSR4-201ENST00000320857 LMO1P25800 156 aa14.35□□□□□ -0.11
SSR4-201ENST00000320857 S100GP29377 79 aa14.35□□□□□ -0.11
SSR4-201ENST00000320857 KLF3P57682 345 aaPredicted RBP14.35□□□□□ -0.11
SSR4-201ENST00000320857 NKX6-1P78426 367 aaPredicted RBP14.35□□□□□ -0.11
SSR4-201ENST00000320857 RAB32Q13637 225 aa14.35□□□□□ -0.11
SSR4-201ENST00000320857 SMIM21Q3B7S5 101 aa14.35□□□□□ -0.11
SSR4-201ENST00000320857 PRR30Q53SZ7 412 aaPredicted RBP14.35□□□□□ -0.11
SSR4-201ENST00000320857 C5orf24Q7Z6I8 188 aa14.35□□□□□ -0.11
SSR4-201ENST00000320857 LDLRAD3Q86YD5 345 aa14.35□□□□□ -0.11
SSR4-201ENST00000320857 H1FOOQ8IZA3 346 aaPredicted RBP14.35□□□□□ -0.11
SSR4-201ENST00000320857 OR2Z1Q8NG97 314 aa14.35□□□□□ -0.11
SSR4-201ENST00000320857 PRR7Q8TB68 274 aa14.35□□□□□ -0.11
SSR4-201ENST00000320857 GLYATL2Q8WU03 294 aa14.35□□□□□ -0.11
SSR4-201ENST00000320857 ST8SIA2Q92186 375 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms