RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 SELENOHQ8IZQ5 122 aaKnown RBP14.91□□□□□ -0.02
COL9A1-201ENST00000320755 MED12LQ86YW9 2145 aa14.9□□□□□ -0.02
COL9A1-201ENST00000320755 EP300Q09472 2414 aaPredicted RBP14.9□□□□□ -0.02
COL9A1-201ENST00000320755 IGKV1-6A0A0C4DH72 117 aa14.9□□□□□ -0.02
COL9A1-201ENST00000320755 CA6P23280 308 aa14.9□□□□□ -0.02
COL9A1-201ENST00000320755 OR2G3Q8NGZ4 309 aa14.9□□□□□ -0.02
COL9A1-201ENST00000320755 ZNF175Q9Y473 711 aa14.9□□□□□ -0.02
COL9A1-201ENST00000320755 NBEAQ8NFP9 2946 aa14.9□□□□□ -0.02
COL9A1-201ENST00000320755 ARGFXA6NJG6 315 aa14.9□□□□□ -0.02
COL9A1-201ENST00000320755 H3BP45 60 aa14.9□□□□□ -0.02
COL9A1-201ENST00000320755 NDUFA2O43678 99 aa14.9□□□□□ -0.02
COL9A1-201ENST00000320755 ZNF44P15621 663 aa14.9□□□□□ -0.02
COL9A1-201ENST00000320755 P4HA3Q7Z4N8 544 aa14.9□□□□□ -0.02
COL9A1-201ENST00000320755 SUMF2Q8NBJ7 301 aa14.9□□□□□ -0.02
COL9A1-201ENST00000320755 ARV1Q9H2C2 271 aa14.9□□□□□ -0.02
COL9A1-201ENST00000320755 C19orf67A6NJJ6 358 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 RHBDL1O75783 438 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 SLC34A2O95436 690 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 NAPSAO96009 420 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 AWAT1Q58HT5 328 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 RARRES2Q99969 163 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 SMCO4Q9NRQ5 59 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 LNP1A1A4G5 178 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 COLCA2A8K830 154 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 KRBOX4Q5JUW0 171 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 TMEM164Q5U3C3 297 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 OR5C1Q8NGR4 320 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 PLSCR2Q9NRY7 297 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 ABI3Q9P2A4 366 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 KPTNQ9Y664 436 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 ASPMQ8IZT6 3477 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 ANKRD30BLA7E2S9 258 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 WRBO00258 174 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 ATP1A1-AS1Q5TC04 95 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 DEFB123Q8N688 67 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 LILRB1Q8NHL6 650 aaPredicted RBP14.89□□□□□ -0.03
COL9A1-201ENST00000320755 POM121L2Q96KW2 1035 aa14.89□□□□□ -0.03
COL9A1-201ENST00000320755 ESRP2Q9H6T0 727 aaKnown RBP14.89□□□□□ -0.03
COL9A1-201ENST00000320755 ZNF724A8MTY0 619 aa14.88□□□□□ -0.03
COL9A1-201ENST00000320755 ATP6V0CP27449 155 aa14.88□□□□□ -0.03
COL9A1-201ENST00000320755 CCL20P78556 96 aa14.88□□□□□ -0.03
COL9A1-201ENST00000320755 RUNX1Q01196 453 aa14.88□□□□□ -0.03
COL9A1-201ENST00000320755 LYPD6BQ8NI32 183 aa14.88□□□□□ -0.03
COL9A1-201ENST00000320755 TMEM171Q8WVE6 324 aa14.88□□□□□ -0.03
COL9A1-201ENST00000320755 LINC00470Q9BZP3 86 aa14.88□□□□□ -0.03
COL9A1-201ENST00000320755 LIPGQ9Y5X9 500 aa14.88□□□□□ -0.03
COL9A1-201ENST00000320755 C7orf77A4D0Y5 90 aa14.88□□□□□ -0.03
COL9A1-201ENST00000320755 UMAD1C9J7I0 102 aa14.88□□□□□ -0.03
COL9A1-201ENST00000320755 CHST1O43916 411 aa14.88□□□□□ -0.03
COL9A1-201ENST00000320755 CDS2O95674 445 aa14.88□□□□□ -0.03
COL9A1-201ENST00000320755 TMEM50AO95807 157 aa14.88□□□□□ -0.03
COL9A1-201ENST00000320755 APLNRP35414 380 aa14.88□□□□□ -0.03
COL9A1-201ENST00000320755 CMTM1Q8IZ96 169 aa14.88□□□□□ -0.03
COL9A1-201ENST00000320755 TMEM252Q8N6L7 170 aa14.88□□□□□ -0.03
COL9A1-201ENST00000320755 RNASE11Q8TAA1 199 aaKnown RBP14.88□□□□□ -0.03
COL9A1-201ENST00000320755 ERRFI1Q9UJM3 462 aaPredicted RBP14.88□□□□□ -0.03
COL9A1-201ENST00000320755 GTF3C1Q12789 2109 aa14.87□□□□□ -0.03
COL9A1-201ENST00000320755 PROB1E7EW31 1015 aa14.87□□□□□ -0.03
COL9A1-201ENST00000320755 ARG1P05089 322 aa14.87□□□□□ -0.03
COL9A1-201ENST00000320755 WNT5AP41221 380 aa14.87□□□□□ -0.03
COL9A1-201ENST00000320755 MEOX1P50221 254 aa14.87□□□□□ -0.03
COL9A1-201ENST00000320755 ZPBPQ9BS86 351 aa14.87□□□□□ -0.03
COL9A1-201ENST00000320755 KIR2DS1A0A191URI9 304 aa14.87□□□□□ -0.03
COL9A1-201ENST00000320755 KIR2DS4P43632 304 aa14.87□□□□□ -0.03
COL9A1-201ENST00000320755 DYNLT3P51808 116 aa14.87□□□□□ -0.03
COL9A1-201ENST00000320755 SRPXP78539 464 aa14.87□□□□□ -0.03
COL9A1-201ENST00000320755 CLN3Q13286 438 aa14.87□□□□□ -0.03
COL9A1-201ENST00000320755 KIR2DS1Q14954 304 aa14.87□□□□□ -0.03
COL9A1-201ENST00000320755 DHRS13Q6UX07 377 aa14.87□□□□□ -0.03
COL9A1-201ENST00000320755 BCL2L14Q9BZR8 327 aa14.87□□□□□ -0.03
COL9A1-201ENST00000320755 KCNJ16Q9NPI9 418 aa14.87□□□□□ -0.03
COL9A1-201ENST00000320755 BIN3Q9NQY0 253 aa14.87□□□□□ -0.03
COL9A1-201ENST00000320755 GLRX2Q9NS18 164 aa14.87□□□□□ -0.03
COL9A1-201ENST00000320755 PUS1Q9Y606 427 aaKnown RBP eCLIP14.87□□□□□ -0.03
COL9A1-201ENST00000320755 ATP23Q9Y6H3 246 aa14.87□□□□□ -0.03
COL9A1-201ENST00000320755 LINC01387J3KSC0 135 aa14.86□□□□□ -0.03
COL9A1-201ENST00000320755 CBR1P16152 277 aa14.86□□□□□ -0.03
COL9A1-201ENST00000320755 ZNF16P17020 682 aaPredicted RBP14.86□□□□□ -0.03
COL9A1-201ENST00000320755 ZNF154Q13106 437 aa14.86□□□□□ -0.03
COL9A1-201ENST00000320755 NRN1LQ496H8 165 aa14.86□□□□□ -0.03
COL9A1-201ENST00000320755 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.86□□□□□ -0.03
COL9A1-201ENST00000320755 FAM185AQ8N0U4 392 aa14.86□□□□□ -0.03
COL9A1-201ENST00000320755 OR5A2Q8NGI9 324 aa14.86□□□□□ -0.03
COL9A1-201ENST00000320755 TMEM56Q96MV1 263 aa14.86□□□□□ -0.03
COL9A1-201ENST00000320755 SPIN2AQ99865 258 aa14.86□□□□□ -0.03
COL9A1-201ENST00000320755 SPIN2BQ9BPZ2 258 aa14.86□□□□□ -0.03
COL9A1-201ENST00000320755 RBM7Q9Y580 266 aaKnown RBP14.86□□□□□ -0.03
COL9A1-201ENST00000320755 TMEM56-RWDD3S4R434 201 aa14.86□□□□□ -0.03
COL9A1-201ENST00000320755 ARR3P36575 388 aa14.86□□□□□ -0.03
COL9A1-201ENST00000320755 MYPOPQ86VE0 399 aaPredicted RBP14.86□□□□□ -0.03
COL9A1-201ENST00000320755 SPRY4Q9C004 299 aa14.86□□□□□ -0.03
COL9A1-201ENST00000320755 PLEKHF2Q9H8W4 249 aa14.86□□□□□ -0.03
COL9A1-201ENST00000320755 RP1L1Q8IWN7 2480 aaPredicted RBP14.86□□□□□ -0.03
COL9A1-201ENST00000320755 FAM58AQ8N1B3 248 aa14.86□□□□□ -0.03
COL9A1-201ENST00000320755 Q8NFD4 153 aa14.86□□□□□ -0.03
COL9A1-201ENST00000320755 OR10J5Q8NHC4 309 aa14.86□□□□□ -0.03
COL9A1-201ENST00000320755 OR5P3Q8WZ94 311 aa14.86□□□□□ -0.03
COL9A1-201ENST00000320755 SCRT1Q9BWW7 348 aa14.86□□□□□ -0.03
COL9A1-201ENST00000320755 CNOT1A5YKK6 2376 aaKnown RBP14.86□□□□□ -0.03
COL9A1-201ENST00000320755 TRAV24A0A0B4J272 114 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms