RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 APLNRP35414 380 aa11.74□□□□□ -0.53
ATG4C-201ENST00000317868 RAB5CP51148 216 aa11.74□□□□□ -0.53
ATG4C-201ENST00000317868 FLI1Q01543 452 aaPredicted RBP11.74□□□□□ -0.53
ATG4C-201ENST00000317868 CLN3Q13286 438 aa11.74□□□□□ -0.53
ATG4C-201ENST00000317868 SP5Q6BEB4 398 aaPredicted RBP11.74□□□□□ -0.53
ATG4C-201ENST00000317868 HAGHLQ6PII5 290 aaPredicted RBP11.74□□□□□ -0.53
ATG4C-201ENST00000317868 DHRS13Q6UX07 377 aa11.74□□□□□ -0.53
ATG4C-201ENST00000317868 MEX3BQ6ZN04 569 aaKnown RBP11.74□□□□□ -0.53
ATG4C-201ENST00000317868 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.74□□□□□ -0.53
ATG4C-201ENST00000317868 CBLN2Q8IUK8 224 aa11.74□□□□□ -0.53
ATG4C-201ENST00000317868 OR5D13Q8NGL4 314 aa11.74□□□□□ -0.53
ATG4C-201ENST00000317868 CACFD1Q9UGQ2 172 aa11.74□□□□□ -0.53
ATG4C-201ENST00000317868 ANKRD30BLA7E2S9 258 aa11.74□□□□□ -0.53
ATG4C-201ENST00000317868 PAX6P26367 422 aa11.74□□□□□ -0.53
ATG4C-201ENST00000317868 ID3Q02535 119 aa11.74□□□□□ -0.53
ATG4C-201ENST00000317868 TGIF1Q15583 401 aa11.74□□□□□ -0.53
ATG4C-201ENST00000317868 TMEM88Q6PEY1 159 aa11.74□□□□□ -0.53
ATG4C-201ENST00000317868 MDP1Q86V88 176 aa11.74□□□□□ -0.53
ATG4C-201ENST00000317868 H1FOOQ8IZA3 346 aaPredicted RBP11.74□□□□□ -0.53
ATG4C-201ENST00000317868 LYRM2Q9NU23 88 aaPredicted RBP11.74□□□□□ -0.53
ATG4C-201ENST00000317868 TREM2Q9NZC2 230 aa11.74□□□□□ -0.53
ATG4C-201ENST00000317868 ZNF175Q9Y473 711 aa11.74□□□□□ -0.53
ATG4C-201ENST00000317868 KLF2Q9Y5W3 355 aaPredicted RBP11.74□□□□□ -0.53
ATG4C-201ENST00000317868 PITX3O75364 302 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 MMP9P14780 707 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 CD46P15529 392 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 ERVK11-1P61568 191 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 OR2C3Q8N628 320 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 SECTM1Q8WVN6 248 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 KIRREL1Q96J84 757 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 ZNF488Q96MN9 340 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 SPIN2AQ99865 258 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 SPIN2BQ9BPZ2 258 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 STRAPQ9Y3F4 350 aaKnown RBP11.73□□□□□ -0.53
ATG4C-201ENST00000317868 IGSF23A1L1A6 192 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 J3QT63 122 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 K7N7A8 449 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 HLA-DRB3P79483 266 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 SHEQ5VZ18 495 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 WDR86Q86TI4 376 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 MYPOPQ86VE0 399 aaPredicted RBP11.73□□□□□ -0.53
ATG4C-201ENST00000317868 MCEMP1Q8IX19 187 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 FAM58AQ8N1B3 248 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 KDF1Q8NAX2 398 aaPredicted RBP11.73□□□□□ -0.53
ATG4C-201ENST00000317868 NANOS1Q8WY41 292 aaKnown RBP11.73□□□□□ -0.53
ATG4C-201ENST00000317868 SH3BGRL3Q9H299 93 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 CCL28Q9NRJ3 127 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 DLL3Q9NYJ7 618 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 A0A1B0GW64 132 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 VDAC1P21796 283 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 NKX2-1P43699 371 aaPredicted RBP11.73□□□□□ -0.53
ATG4C-201ENST00000317868 GNMTQ14749 295 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 GUSBP1Q15486 140 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 HIST1H2AAQ96QV6 131 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 C12orf49Q9H741 205 aa11.73□□□□□ -0.53
ATG4C-201ENST00000317868 SPENQ96T58 3664 aaKnown RBP11.72□□□□□ -0.53
ATG4C-201ENST00000317868 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.72□□□□□ -0.53
ATG4C-201ENST00000317868 PGLYRP1O75594 196 aaPredicted RBP11.72□□□□□ -0.53
ATG4C-201ENST00000317868 RHBDL1O75783 438 aa11.72□□□□□ -0.53
ATG4C-201ENST00000317868 IGLV2-14P01704 120 aa11.72□□□□□ -0.53
ATG4C-201ENST00000317868 CD80P33681 288 aa11.72□□□□□ -0.53
ATG4C-201ENST00000317868 MIDNQ504T8 468 aa11.72□□□□□ -0.53
ATG4C-201ENST00000317868 ZNF695Q8IW36 515 aa11.72□□□□□ -0.53
ATG4C-201ENST00000317868 ZNF565Q8N9K5 539 aa11.72□□□□□ -0.53
ATG4C-201ENST00000317868 LUZP4Q9P127 313 aa11.72□□□□□ -0.53
ATG4C-201ENST00000317868 UBE2J1Q9Y385 318 aaPredicted RBP11.72□□□□□ -0.53
ATG4C-201ENST00000317868 RNF115Q9Y4L5 304 aa11.72□□□□□ -0.53
ATG4C-201ENST00000317868 PTPRBP23467 1997 aa11.72□□□□□ -0.53
ATG4C-201ENST00000317868 TRGV5A0A0B4J1U4 118 aa11.72□□□□□ -0.53
ATG4C-201ENST00000317868 PCNX2A6NKB5 2137 aa11.72□□□□□ -0.53
ATG4C-201ENST00000317868 SMPD2O60906 423 aa11.72□□□□□ -0.53
ATG4C-201ENST00000317868 ZNF806P0C7X5 589 aa11.72□□□□□ -0.53
ATG4C-201ENST00000317868 SLC25A6P12236 298 aa11.72□□□□□ -0.53
ATG4C-201ENST00000317868 SWI5Q1ZZU3 235 aa11.72□□□□□ -0.53
ATG4C-201ENST00000317868 PRELID3BQ9Y3B1 194 aa11.72□□□□□ -0.53
ATG4C-201ENST00000317868 OR2W1Q9Y3N9 320 aa11.72□□□□□ -0.53
ATG4C-201ENST00000317868 PROB1E7EW31 1015 aa11.71□□□□□ -0.53
ATG4C-201ENST00000317868 HSPB6O14558 160 aa11.71□□□□□ -0.53
ATG4C-201ENST00000317868 DEGS1O15121 323 aa11.71□□□□□ -0.53
ATG4C-201ENST00000317868 ADAM20O43506 726 aa11.71□□□□□ -0.53
ATG4C-201ENST00000317868 MDH2P40926 338 aaKnown RBP11.71□□□□□ -0.53
ATG4C-201ENST00000317868 POLR2GP62487 172 aaKnown RBP eCLIP11.71□□□□□ -0.53
ATG4C-201ENST00000317868 ZNF766Q5HY98 468 aa11.71□□□□□ -0.53
ATG4C-201ENST00000317868 ATP1A1-AS1Q5TC04 95 aa11.71□□□□□ -0.53
ATG4C-201ENST00000317868 TMEM171Q8WVE6 324 aa11.71□□□□□ -0.53
ATG4C-201ENST00000317868 GMPPAQ96IJ6 420 aaPredicted RBP11.71□□□□□ -0.53
ATG4C-201ENST00000317868 C19orf12Q9NSK7 152 aa11.71□□□□□ -0.53
ATG4C-201ENST00000317868 TAAR3PQ9P1P4 343 aa11.71□□□□□ -0.53
ATG4C-201ENST00000317868 CLCF1Q9UBD9 225 aa11.71□□□□□ -0.53
ATG4C-201ENST00000317868 FAM24AA6NFZ4 105 aa11.71□□□□□ -0.54
ATG4C-201ENST00000317868 KIAA1324LA8MWY0 1029 aaPredicted RBP11.71□□□□□ -0.54
ATG4C-201ENST00000317868 C1QTNF9BB2RNN3 333 aa11.71□□□□□ -0.54
ATG4C-201ENST00000317868 SLC34A2O95436 690 aa11.71□□□□□ -0.54
ATG4C-201ENST00000317868 TMEM50AO95807 157 aa11.71□□□□□ -0.54
ATG4C-201ENST00000317868 F2RP25116 425 aa11.71□□□□□ -0.54
ATG4C-201ENST00000317868 OR2T2Q6IF00 324 aa11.71□□□□□ -0.54
ATG4C-201ENST00000317868 ZNF295-AS1Q8N0V1 137 aa11.71□□□□□ -0.54
ATG4C-201ENST00000317868 C17orf78Q8N4C9 275 aa11.71□□□□□ -0.54
ATG4C-201ENST00000317868 DEFB127Q9H1M4 99 aa11.71□□□□□ -0.54
ATG4C-201ENST00000317868 HIPK2Q9H2X6 1198 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms