RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 ABCA11PQ4W5N1 156 aa16.75■□□□□ 0.27
ZNF554-201ENST00000317243 ZNF774Q6NX45 483 aa16.75■□□□□ 0.27
ZNF554-201ENST00000317243 OR13D1Q8NGV5 346 aa16.75■□□□□ 0.27
ZNF554-201ENST00000317243 NDUFAF3Q9BU61 184 aa16.75■□□□□ 0.27
ZNF554-201ENST00000317243 ZNF705GA8MUZ8 300 aaPredicted RBP16.75■□□□□ 0.27
ZNF554-201ENST00000317243 CTSDP07339 412 aaPredicted RBP16.75■□□□□ 0.27
ZNF554-201ENST00000317243 NR2C1P13056 603 aa16.75■□□□□ 0.27
ZNF554-201ENST00000317243 P4HA3Q7Z4N8 544 aa16.75■□□□□ 0.27
ZNF554-201ENST00000317243 OR5L1Q8NGL2 311 aa16.75■□□□□ 0.27
ZNF554-201ENST00000317243 TMEM54Q969K7 222 aa16.75■□□□□ 0.27
ZNF554-201ENST00000317243 LOXL2Q9Y4K0 774 aa16.75■□□□□ 0.27
ZNF554-201ENST00000317243 WSB1Q9Y6I7 421 aa16.75■□□□□ 0.27
ZNF554-201ENST00000317243 COL27A1Q8IZC6 1860 aaPredicted RBP16.75■□□□□ 0.27
ZNF554-201ENST00000317243 TLX3O43711 291 aaPredicted RBP16.74■□□□□ 0.27
ZNF554-201ENST00000317243 SFTPCP11686 197 aa16.74■□□□□ 0.27
ZNF554-201ENST00000317243 CCL1P22362 96 aa16.74■□□□□ 0.27
ZNF554-201ENST00000317243 SMDT1Q9H4I9 107 aa16.74■□□□□ 0.27
ZNF554-201ENST00000317243 GPR173Q9NS66 373 aa16.74■□□□□ 0.27
ZNF554-201ENST00000317243 ANXA10Q9UJ72 324 aa16.74■□□□□ 0.27
ZNF554-201ENST00000317243 LRRC3CA6NJW4 275 aa16.74■□□□□ 0.27
ZNF554-201ENST00000317243 CELA3AP09093 270 aa16.74■□□□□ 0.27
ZNF554-201ENST00000317243 SPINK2P20155 84 aa16.74■□□□□ 0.27
ZNF554-201ENST00000317243 FGF7P21781 194 aa16.74■□□□□ 0.27
ZNF554-201ENST00000317243 JOSD1Q15040 202 aaPredicted RBP16.74■□□□□ 0.27
ZNF554-201ENST00000317243 KCNMB1Q16558 191 aa16.74■□□□□ 0.27
ZNF554-201ENST00000317243 GPR157Q5UAW9 335 aa16.74■□□□□ 0.27
ZNF554-201ENST00000317243 C9orf135Q5VTT2 229 aa16.74■□□□□ 0.27
ZNF554-201ENST00000317243 SLC22A25Q6T423 547 aa16.74■□□□□ 0.27
ZNF554-201ENST00000317243 GGNQ86UU5 652 aa16.74■□□□□ 0.27
ZNF554-201ENST00000317243 ABHD3Q8WU67 409 aa16.74■□□□□ 0.27
ZNF554-201ENST00000317243 RTN4IP1Q8WWV3 396 aaPredicted RBP16.74■□□□□ 0.27
ZNF554-201ENST00000317243 SIRT7Q9NRC8 400 aa16.74■□□□□ 0.27
ZNF554-201ENST00000317243 OR14J1Q9UGF5 321 aa16.74■□□□□ 0.27
ZNF554-201ENST00000317243 AK3Q9UIJ7 227 aa16.74■□□□□ 0.27
ZNF554-201ENST00000317243 MSTNO14793 375 aa16.73■□□□□ 0.27
ZNF554-201ENST00000317243 SPRY1O43609 319 aaPredicted RBP16.73■□□□□ 0.27
ZNF554-201ENST00000317243 OMGP23515 440 aa16.73■□□□□ 0.27
ZNF554-201ENST00000317243 ATP6V0CP27449 155 aa16.73■□□□□ 0.27
ZNF554-201ENST00000317243 GUCA1AP43080 201 aaPredicted RBP16.73■□□□□ 0.27
ZNF554-201ENST00000317243 NOVA1P51513 510 aaKnown RBP16.73■□□□□ 0.27
ZNF554-201ENST00000317243 RELQ04864 619 aaPredicted RBP16.73■□□□□ 0.27
ZNF554-201ENST00000317243 ICAM4Q14773 271 aa16.73■□□□□ 0.27
ZNF554-201ENST00000317243 PEAR1Q5VY43 1037 aaPredicted RBP16.73■□□□□ 0.27
ZNF554-201ENST00000317243 C17orf78Q8N4C9 275 aa16.73■□□□□ 0.27
ZNF554-201ENST00000317243 M0R135 149 aa16.73■□□□□ 0.27
ZNF554-201ENST00000317243 SCAF4O95104 1147 aaKnown RBP16.73■□□□□ 0.27
ZNF554-201ENST00000317243 TNFRSF9Q07011 255 aa16.73■□□□□ 0.27
ZNF554-201ENST00000317243 ZNF799Q96GE5 643 aa16.73■□□□□ 0.27
ZNF554-201ENST00000317243 DDA1Q9BW61 102 aa16.73■□□□□ 0.27
ZNF554-201ENST00000317243 FOXJ2Q9P0K8 574 aa16.73■□□□□ 0.27
ZNF554-201ENST00000317243 SOX15O60248 233 aa16.72■□□□□ 0.27
ZNF554-201ENST00000317243 CBR3O75828 277 aa16.72■□□□□ 0.27
ZNF554-201ENST00000317243 FUT3P21217 361 aa16.72■□□□□ 0.27
ZNF554-201ENST00000317243 CEACAM6P40199 344 aa16.72■□□□□ 0.27
ZNF554-201ENST00000317243 GRB2P62993 217 aaKnown RBP16.72■□□□□ 0.27
ZNF554-201ENST00000317243 RAC1P63000 192 aa16.72■□□□□ 0.27
ZNF554-201ENST00000317243 FBXW12Q6X9E4 464 aa16.72■□□□□ 0.27
ZNF554-201ENST00000317243 GJC3Q8NFK1 279 aa16.72■□□□□ 0.27
ZNF554-201ENST00000317243 FAM86C1Q9NVL1 165 aa16.72■□□□□ 0.27
ZNF554-201ENST00000317243 LOC102725191A0A1B0GVB3 256 aa16.72■□□□□ 0.27
ZNF554-201ENST00000317243 JMJD7P0C870 316 aa16.72■□□□□ 0.27
ZNF554-201ENST00000317243 ZNF728P0DKX0 622 aa16.72■□□□□ 0.27
ZNF554-201ENST00000317243 MTCP1P56278 107 aa16.72■□□□□ 0.27
ZNF554-201ENST00000317243 SRYQ05066 204 aa16.72■□□□□ 0.27
ZNF554-201ENST00000317243 PDCD1Q15116 288 aa16.72■□□□□ 0.27
ZNF554-201ENST00000317243 RAB24Q969Q5 203 aa16.72■□□□□ 0.27
ZNF554-201ENST00000317243 FAM230AA0A1W2PPH8 454 aa16.71■□□□□ 0.27
ZNF554-201ENST00000317243 DHRS3O75911 302 aa16.71■□□□□ 0.27
ZNF554-201ENST00000317243 IL18BPO95998 194 aa16.71■□□□□ 0.27
ZNF554-201ENST00000317243 P04436 131 aa16.71■□□□□ 0.27
ZNF554-201ENST00000317243 DUSP3P51452 185 aaPredicted RBP16.71■□□□□ 0.27
ZNF554-201ENST00000317243 C10orf128Q5T292 105 aa16.71■□□□□ 0.27
ZNF554-201ENST00000317243 C1orf87Q8N0U7 546 aa16.71■□□□□ 0.27
ZNF554-201ENST00000317243 OR11L1Q8NGX0 322 aa16.71■□□□□ 0.27
ZNF554-201ENST00000317243 HAS2Q92819 552 aa16.71■□□□□ 0.27
ZNF554-201ENST00000317243 P4HTMQ9NXG6 502 aa16.71■□□□□ 0.27
ZNF554-201ENST00000317243 KIAA1456Q9P272 454 aa16.71■□□□□ 0.27
ZNF554-201ENST00000317243 CACNA1HO95180 2353 aa16.71■□□□□ 0.27
ZNF554-201ENST00000317243 FAM24AA6NFZ4 105 aa16.71■□□□□ 0.27
ZNF554-201ENST00000317243 CARD18P57730 90 aa16.71■□□□□ 0.27
ZNF554-201ENST00000317243 DCAF12Q5T6F0 453 aa16.71■□□□□ 0.27
ZNF554-201ENST00000317243 OR10D3Q8NH80 312 aa16.71■□□□□ 0.27
ZNF554-201ENST00000317243 NAA60Q9H7X0 242 aa16.71■□□□□ 0.27
ZNF554-201ENST00000317243 AMBPP02760 352 aa16.7■□□□□ 0.26
ZNF554-201ENST00000317243 EWSR1Q01844 656 aaKnown RBP eCLIP16.7■□□□□ 0.26
ZNF554-201ENST00000317243 MEX3BQ6ZN04 569 aaKnown RBP16.7■□□□□ 0.26
ZNF554-201ENST00000317243 PSMF1Q92530 271 aa16.7■□□□□ 0.26
ZNF554-201ENST00000317243 NOL4LQ96MY1 436 aaPredicted RBP16.7■□□□□ 0.26
ZNF554-201ENST00000317243 TM2D1Q9BX74 207 aa16.7■□□□□ 0.26
ZNF554-201ENST00000317243 GPR87Q9BY21 358 aa16.7■□□□□ 0.26
ZNF554-201ENST00000317243 LNP1A1A4G5 178 aa16.7■□□□□ 0.26
ZNF554-201ENST00000317243 ST8SIA3O43173 380 aa16.7■□□□□ 0.26
ZNF554-201ENST00000317243 HLA-DRB3P79483 266 aa16.7■□□□□ 0.26
ZNF554-201ENST00000317243 TRA2AQ13595 282 aaKnown RBP eCLIP16.7■□□□□ 0.26
ZNF554-201ENST00000317243 TMEM187Q14656 261 aa16.7■□□□□ 0.26
ZNF554-201ENST00000317243 ZNF880Q6PDB4 577 aa16.7■□□□□ 0.26
ZNF554-201ENST00000317243 PITPNC1Q9UKF7 332 aa16.7■□□□□ 0.26
ZNF554-201ENST00000317243 GDF1P27539 372 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 ECI1P42126 302 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 SUMF1Q8NBK3 374 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms