RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 ZNF629Q9UEG4 869 aaPredicted RBP12.11□□□□□ -0.47
VRK3-201ENST00000316763 ANKRD30BLA7E2S9 258 aa12.1□□□□□ -0.47
VRK3-201ENST00000316763 PHF1O43189 567 aaPredicted RBP12.1□□□□□ -0.47
VRK3-201ENST00000316763 TNFSF13O75888 250 aa12.1□□□□□ -0.47
VRK3-201ENST00000316763 MBPP02686 304 aaPredicted RBP12.1□□□□□ -0.47
VRK3-201ENST00000316763 TK1P04183 234 aa12.1□□□□□ -0.47
VRK3-201ENST00000316763 FOXF2Q12947 444 aa12.1□□□□□ -0.47
VRK3-201ENST00000316763 GPR157Q5UAW9 335 aa12.1□□□□□ -0.47
VRK3-201ENST00000316763 ATRAIDQ6UW56 229 aa12.1□□□□□ -0.47
VRK3-201ENST00000316763 LYZL2Q7Z4W2 148 aa12.1□□□□□ -0.47
VRK3-201ENST00000316763 LINC00596Q86U02 117 aa12.1□□□□□ -0.47
VRK3-201ENST00000316763 SVBPQ8N300 66 aa12.1□□□□□ -0.47
VRK3-201ENST00000316763 OR1K1Q8NGR3 316 aa12.1□□□□□ -0.47
VRK3-201ENST00000316763 HPSE2Q8WWQ2 592 aa12.1□□□□□ -0.47
VRK3-201ENST00000316763 PLSCR4Q9NRQ2 329 aa12.1□□□□□ -0.47
VRK3-201ENST00000316763 FBXL17Q9UF56 701 aa12.1□□□□□ -0.47
VRK3-201ENST00000316763 TMED3Q9Y3Q3 217 aa12.1□□□□□ -0.47
VRK3-201ENST00000316763 ARHGAP21Q5T5U3 1957 aa12.1□□□□□ -0.47
VRK3-201ENST00000316763 KIR2DS1A0A191URI9 304 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 CD300LBA8K4G0 201 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 CTXN2P0C2S0 81 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 TIMP3P35625 211 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 KIR2DS4P43632 304 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 SULT1A2P50226 295 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 TMEM33P57088 247 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 IL13RA2Q14627 380 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 KIR2DS1Q14954 304 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 C1orf185Q5T7R7 199 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 Q6ZT83 130 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 BATF2Q8N1L9 274 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 CNEP1R1Q8N9A8 125 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 ZNF565Q8N9K5 539 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 NEK7Q8TDX7 302 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 GLYATL2Q8WU03 294 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 BCL2L2Q92843 193 aaPredicted RBP12.09□□□□□ -0.47
VRK3-201ENST00000316763 MSI2Q96DH6 328 aaKnown RBP12.09□□□□□ -0.47
VRK3-201ENST00000316763 RIMS4Q9H426 269 aaPredicted RBP12.09□□□□□ -0.47
VRK3-201ENST00000316763 SPACA1Q9HBV2 294 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 Q9N2K0 584 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 TREM1Q9NP99 234 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 MPC1Q9Y5U8 109 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 BORCS7-ASMTA0A0B4J1R7 106 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 ZNF503-AS2A6NEH8 195 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 MPPED1O15442 326 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 GPR137BO60478 399 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 MED6O75586 246 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 CGAP01215 116 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 MST1LQ2TV78 715 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 EIF2S3LQ2VIR3 472 aaKnown RBP12.09□□□□□ -0.47
VRK3-201ENST00000316763 TMEM268Q5VZI3 342 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 VWA1Q6PCB0 445 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 FBXW12Q6X9E4 464 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 ZNF573Q86YE8 665 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 BOD1Q96IK1 185 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 RCC2Q9P258 522 aaKnown RBP12.09□□□□□ -0.47
VRK3-201ENST00000316763 ZNF835Q9Y2P0 537 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 AMDHD2Q9Y303 409 aa12.09□□□□□ -0.47
VRK3-201ENST00000316763 C3orf85A0A1B0GTC6 90 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 OR5B21A6NL26 309 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 F8W036 122 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 DNASE2O00115 360 aaPredicted RBP12.08□□□□□ -0.48
VRK3-201ENST00000316763 ABCD4O14678 606 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 ST8SIA3O43173 380 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 NAPSAO96009 420 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 NGFP01138 241 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 GLAP06280 429 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 IGHV1-2P23083 117 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 RND3P61587 244 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 DAZAP2Q15038 168 aaPredicted RBP12.08□□□□□ -0.48
VRK3-201ENST00000316763 SMUG1Q53HV7 270 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 IGSF11Q5DX21 431 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 ZNF843Q8N446 348 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 UBAC2Q8NBM4 344 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 ST6GALNAC3Q8NDV1 305 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 OR11L1Q8NGX0 322 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 OR5P3Q8WZ94 311 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 STARD4Q96DR4 205 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 FGF23Q9GZV9 251 aaPredicted RBP12.08□□□□□ -0.48
VRK3-201ENST00000316763 HRH4Q9H3N8 390 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 MTCH1Q9NZJ7 389 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 RALYQ9UKM9 306 aaKnown RBP12.08□□□□□ -0.48
VRK3-201ENST00000316763 SMG1Q96Q15 3661 aaKnown RBP12.08□□□□□ -0.48
VRK3-201ENST00000316763 DOCK7Q96N67 2140 aa12.08□□□□□ -0.48
VRK3-201ENST00000316763 NUPL2O15504 423 aaKnown RBP12.07□□□□□ -0.48
VRK3-201ENST00000316763 C1QL1O75973 258 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 RCC1P18754 421 aaPredicted RBP12.07□□□□□ -0.48
VRK3-201ENST00000316763 COX5AP20674 150 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 P2RY1P47900 373 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 CAV2P51636 162 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 ARHGDIBP52566 201 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 AKR1C2P52895 323 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 GNG3P63215 75 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 AKR1C1Q04828 323 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 GNMTQ14749 295 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 SWI5Q1ZZU3 235 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 Q6ZPA2 131 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 SPAG16Q8N0X2 631 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 RPRMLQ8N4K4 120 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 GTF3AQ92664 365 aaKnown RBP12.07□□□□□ -0.48
VRK3-201ENST00000316763 PARP11Q9NR21 331 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms