RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ZNF705BP0CI00 300 aaPredicted RBP4.13□□□□□ -1.75
PTPN13-201ENST00000316707 RBM11P57052 281 aaKnown RBP4.13□□□□□ -1.75
PTPN13-201ENST00000316707 RPS18P62269 152 aaKnown RBP4.13□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF92Q03936 586 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 SHHQ15465 462 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF709Q8N972 641 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 SUMF1Q8NBK3 374 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 Q8NFD4 153 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM37Q8WXS4 190 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 LIN37Q96GY3 246 aaPredicted RBP4.13□□□□□ -1.75
PTPN13-201ENST00000316707 TP53RKQ96S44 253 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 SNHG12Q9BXW3 62 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 KNL1Q8NG31 2342 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 ANGPTL7O43827 346 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 ONECUT2O95948 504 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 LCATP04180 440 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 CTSBP07858 339 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 GLI4P10075 376 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 GALR1P47211 349 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 TPPP2P59282 170 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 DLX2Q07687 328 aaPredicted RBP4.13□□□□□ -1.75
PTPN13-201ENST00000316707 CXorf66Q5JRM2 361 aaPredicted RBP4.13□□□□□ -1.75
PTPN13-201ENST00000316707 TBC1D26Q86UD7 250 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 NUDT22Q9BRQ3 303 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 NPIPA2E9PIF3 369 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 NPIPA3F8WFD2 350 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF737O75373 536 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 COL9A1P20849 921 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 OR3A1P47881 315 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 CLN3Q13286 438 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM183BQ1AE95 376 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 PRSS58Q8IYP2 241 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 CRISPLD2Q9H0B8 497 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 GLRX2Q9NS18 164 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 RNF115Q9Y4L5 304 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 EREGO14944 169 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 CLDN17P56750 224 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 UBE2NP61088 152 aaKnown RBP4.13□□□□□ -1.75
PTPN13-201ENST00000316707 PLPPR5Q32ZL2 321 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 DCAF10Q5QP82 559 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 CDPF1Q6NVV7 123 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 MKXQ8IYA7 352 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 OR4B1Q8NGF8 309 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 CIB3Q96Q77 187 aaPredicted RBP4.13□□□□□ -1.75
PTPN13-201ENST00000316707 HDHD3Q9BSH5 251 aaPredicted RBP4.13□□□□□ -1.75
PTPN13-201ENST00000316707 LIME1Q9H400 295 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 A0A1W2PPC4 97 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 MED19A0JLT2 244 aaPredicted RBP4.12□□□□□ -1.75
PTPN13-201ENST00000316707 MMP23AO75900 390 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM50AO95807 157 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 COX5BP10606 129 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 APLNRP35414 380 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 RPL29P47914 159 aaKnown RBP4.12□□□□□ -1.75
PTPN13-201ENST00000316707 FOXL1Q12952 345 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF154Q13106 437 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 COL5A1-AS1Q5SY13 56 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 RNF144BQ7Z419 303 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 C17orf82Q86X59 251 aaPredicted RBP4.12□□□□□ -1.75
PTPN13-201ENST00000316707 MIEN1Q9BRT3 115 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 RBM24Q9BX46 236 aaKnown RBP4.12□□□□□ -1.75
PTPN13-201ENST00000316707 DEFB126Q9BYW3 111 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 PCED1AQ9H1Q7 454 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 KCNIP2Q9NS61 270 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 GPR27Q9NS67 375 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 MMP17Q9ULZ9 603 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 GJE1A6NN92 205 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 MARCH11A6NNE9 402 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 NAPSAO96009 420 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM249Q2WGJ8 235 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 CARD17Q5XLA6 110 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 GAPTQ8N292 157 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF525Q8N782 197 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 OR11L1Q8NGX0 322 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 OR1F12Q8NHA8 337 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 LRRC61Q9BV99 259 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 NAGKQ9UJ70 344 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 C17orf112F2Z3M2 114 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 HPRT1P00492 218 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 IGLV3-19P01714 112 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 IL11P20809 199 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 RRADP55042 308 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 C16orf82Q7Z2V1 217 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 SPRED2Q7Z698 418 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 GBGT1Q8N5D6 347 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF296Q8WUU4 475 aaPredicted RBP4.12□□□□□ -1.75
PTPN13-201ENST00000316707 DUX1O43812 170 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 OPN1LWP04000 364 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 CDAP32320 146 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 ASCL1P50553 236 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 ACTL10Q5JWF8 245 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 LINC00596Q86U02 117 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 RTN4RL2Q86UN3 420 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 C7orf61Q8IZ16 206 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 TCTEX1D1Q8N7M0 179 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 NEK7Q8TDX7 302 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 ABHD14AQ9BUJ0 271 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 PSENENQ9NZ42 101 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 SEMA5BQ9P283 1151 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 TRBV6-6A0A0A6YYG2 114 aa4.12□□□□□ -1.75
PTPN13-201ENST00000316707 IGHV5-51A0A0C4DH38 117 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms