RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 TUSC2O75896 110 aa11.91□□□□□ -0.5
MKS1-201ENST00000313863 CST7O76096 145 aa11.91□□□□□ -0.5
MKS1-201ENST00000313863 YIF1AO95070 293 aa11.91□□□□□ -0.5
MKS1-201ENST00000313863 NAPSAO96009 420 aa11.91□□□□□ -0.5
MKS1-201ENST00000313863 NRN1LQ496H8 165 aa11.91□□□□□ -0.5
MKS1-201ENST00000313863 ZNF818PQ6ZRF7 136 aa11.91□□□□□ -0.5
MKS1-201ENST00000313863 RPS19BP1Q86WX3 136 aaKnown RBP11.91□□□□□ -0.5
MKS1-201ENST00000313863 SGCZQ96LD1 299 aa11.91□□□□□ -0.5
MKS1-201ENST00000313863 SIGLEC12Q96PQ1 595 aa11.91□□□□□ -0.5
MKS1-201ENST00000313863 RAB40CQ96S21 281 aa11.91□□□□□ -0.5
MKS1-201ENST00000313863 PFDN5Q99471 154 aa11.91□□□□□ -0.5
MKS1-201ENST00000313863 ABHD14AQ9BUJ0 271 aa11.91□□□□□ -0.5
MKS1-201ENST00000313863 A0A1B0GU03 582 aa11.9□□□□□ -0.5
MKS1-201ENST00000313863 ZNF727A8MUV8 499 aa11.9□□□□□ -0.5
MKS1-201ENST00000313863 CHST1O43916 411 aa11.9□□□□□ -0.5
MKS1-201ENST00000313863 COX6A1P12074 109 aa11.9□□□□□ -0.5
MKS1-201ENST00000313863 EPHA8P29322 1005 aaPredicted RBP11.9□□□□□ -0.5
MKS1-201ENST00000313863 FGF12P61328 243 aa11.9□□□□□ -0.5
MKS1-201ENST00000313863 CEACAM16Q2WEN9 425 aa11.9□□□□□ -0.5
MKS1-201ENST00000313863 Q6ZPA2 131 aa11.9□□□□□ -0.5
MKS1-201ENST00000313863 C1orf87Q8N0U7 546 aa11.9□□□□□ -0.5
MKS1-201ENST00000313863 SPEM1Q8N4L4 309 aa11.9□□□□□ -0.5
MKS1-201ENST00000313863 GTF3AQ92664 365 aaKnown RBP11.9□□□□□ -0.5
MKS1-201ENST00000313863 NAT6Q93015 286 aa11.9□□□□□ -0.5
MKS1-201ENST00000313863 P4HTMQ9NXG6 502 aa11.9□□□□□ -0.5
MKS1-201ENST00000313863 SLC22A20A6NK97 555 aa11.9□□□□□ -0.51
MKS1-201ENST00000313863 ZNF716A6NP11 495 aa11.9□□□□□ -0.51
MKS1-201ENST00000313863 CYB5BO43169 146 aa11.9□□□□□ -0.51
MKS1-201ENST00000313863 NOVA1P51513 510 aaKnown RBP11.9□□□□□ -0.51
MKS1-201ENST00000313863 MLF1P58340 268 aa11.9□□□□□ -0.51
MKS1-201ENST00000313863 ACSF3Q4G176 576 aaPredicted RBP11.9□□□□□ -0.51
MKS1-201ENST00000313863 ABLIM2Q6H8Q1 611 aa11.9□□□□□ -0.51
MKS1-201ENST00000313863 LINC00596Q86U02 117 aa11.9□□□□□ -0.51
MKS1-201ENST00000313863 CALHM1Q8IU99 346 aa11.9□□□□□ -0.51
MKS1-201ENST00000313863 MKXQ8IYA7 352 aa11.9□□□□□ -0.51
MKS1-201ENST00000313863 TMEM217Q8N7C4 229 aa11.9□□□□□ -0.51
MKS1-201ENST00000313863 SCGB1C1Q8TD33 95 aa11.9□□□□□ -0.51
MKS1-201ENST00000313863 ALKBH3Q96Q83 286 aaPredicted RBP11.9□□□□□ -0.51
MKS1-201ENST00000313863 PLK3Q9H4B4 646 aa11.9□□□□□ -0.51
MKS1-201ENST00000313863 GPR35Q9HC97 309 aa11.9□□□□□ -0.51
MKS1-201ENST00000313863 GFOD1Q9NXC2 390 aa11.9□□□□□ -0.51
MKS1-201ENST00000313863 CISD1Q9NZ45 108 aaKnown RBP11.9□□□□□ -0.51
MKS1-201ENST00000313863 CACNA1EQ15878 2313 aa11.89□□□□□ -0.51
MKS1-201ENST00000313863 P04436 131 aa11.89□□□□□ -0.51
MKS1-201ENST00000313863 CELA2AP08217 269 aa11.89□□□□□ -0.51
MKS1-201ENST00000313863 CXCL1P09341 107 aa11.89□□□□□ -0.51
MKS1-201ENST00000313863 NPBWR2P48146 333 aa11.89□□□□□ -0.51
MKS1-201ENST00000313863 B3GALT5-AS1P59052 145 aa11.89□□□□□ -0.51
MKS1-201ENST00000313863 DEFA6Q01524 100 aa11.89□□□□□ -0.51
MKS1-201ENST00000313863 ZNF154Q13106 437 aa11.89□□□□□ -0.51
MKS1-201ENST00000313863 PDCD1Q15116 288 aa11.89□□□□□ -0.51
MKS1-201ENST00000313863 TRIM61Q5EBN2 209 aa11.89□□□□□ -0.51
MKS1-201ENST00000313863 PLPPR1Q8TBJ4 325 aa11.89□□□□□ -0.51
MKS1-201ENST00000313863 P2RX4Q99571 388 aa11.89□□□□□ -0.51
MKS1-201ENST00000313863 ATP23Q9Y6H3 246 aa11.89□□□□□ -0.51
MKS1-201ENST00000313863 G3V3Y1 287 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 TRAPPC2LH3BP13 241 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 CLDN34H7C241 214 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 HIST1H2BKO60814 126 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 NDUFS6O75380 124 aaKnown RBP11.88□□□□□ -0.51
MKS1-201ENST00000313863 CNOT4O95628 575 aaKnown RBP11.88□□□□□ -0.51
MKS1-201ENST00000313863 IFNA1P01562 189 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 HIST1H2BJP06899 126 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 HIST1H2BOP23527 126 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 HIST1H2BBP33778 126 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 CD200P41217 278 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 HIST1H2BDP58876 126 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 RPS18P62269 152 aaKnown RBP11.88□□□□□ -0.51
MKS1-201ENST00000313863 HIST1H2BCP62807 126 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 RNPS1Q15287 305 aaKnown RBP11.88□□□□□ -0.51
MKS1-201ENST00000313863 HIST2H2BEQ16778 126 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 PYY3Q5JQD4 70 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.88□□□□□ -0.51
MKS1-201ENST00000313863 OR2V1Q8NHB1 315 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 NEK7Q8TDX7 302 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 HIST1H2BHQ93079 126 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 HIST1H2BNQ99877 126 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 HIST1H2BMQ99879 126 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 PSMG3Q9BT73 122 aaPredicted RBP11.88□□□□□ -0.51
MKS1-201ENST00000313863 RNF115Q9Y4L5 304 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 PTBP3O95758 552 aaKnown RBP11.88□□□□□ -0.51
MKS1-201ENST00000313863 WNT2P09544 360 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 SCTP09683 121 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 PATE4P0C8F1 98 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 EDN3P14138 238 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 BCL3P20749 454 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 PRSS12P56730 875 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 ERVFRD-1P60508 538 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 RUNX1Q01196 453 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 THNSL2Q86YJ6 484 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 CTDSP1Q9GZU7 261 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 OCIAD1Q9NX40 245 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 RFNGQ9Y644 331 aa11.88□□□□□ -0.51
MKS1-201ENST00000313863 TRBV6-6A0A0A6YYG2 114 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 TGIF2-C20orf24A0A0A6YYL0 155 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 CXCL13O43927 109 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 PGLYRP1O75594 196 aaPredicted RBP11.87□□□□□ -0.51
MKS1-201ENST00000313863 TMEM50AO95807 157 aa11.87□□□□□ -0.51
MKS1-201ENST00000313863 CYB5R3P00387 301 aaPredicted RBP11.87□□□□□ -0.51
MKS1-201ENST00000313863 SERPINE2P07093 398 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms