RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 H3BP45 60 aa21.67■■□□□ 1.06
HOXB3-201ENST00000311626 JMJD7P0C870 316 aa21.67■■□□□ 1.06
HOXB3-201ENST00000311626 TMEM45BQ96B21 275 aa21.67■■□□□ 1.06
HOXB3-201ENST00000311626 PLSCR2Q9NRY7 297 aa21.67■■□□□ 1.06
HOXB3-201ENST00000311626 C9orf172C9J069 976 aa21.66■■□□□ 1.06
HOXB3-201ENST00000311626 K7N7A8 449 aa21.66■■□□□ 1.06
HOXB3-201ENST00000311626 DYNLT3P51808 116 aa21.66■■□□□ 1.06
HOXB3-201ENST00000311626 MYPOPQ86VE0 399 aaPredicted RBP21.66■■□□□ 1.06
HOXB3-201ENST00000311626 TMEM252Q8N6L7 170 aa21.66■■□□□ 1.06
HOXB3-201ENST00000311626 PUS1Q9Y606 427 aaKnown RBP eCLIP21.66■■□□□ 1.06
HOXB3-201ENST00000311626 VAMP2P63027 116 aa21.66■■□□□ 1.06
HOXB3-201ENST00000311626 ZNF154Q13106 437 aa21.66■■□□□ 1.06
HOXB3-201ENST00000311626 HIKESHIQ53FT3 197 aa21.66■■□□□ 1.06
HOXB3-201ENST00000311626 PEAR1Q5VY43 1037 aaPredicted RBP21.66■■□□□ 1.06
HOXB3-201ENST00000311626 OR51H1Q8NH63 302 aa21.66■■□□□ 1.06
HOXB3-201ENST00000311626 TECTBQ96PL2 329 aa21.66■■□□□ 1.06
HOXB3-201ENST00000311626 A0A0G2JRQ6 117 aa21.65■■□□□ 1.06
HOXB3-201ENST00000311626 A0A1W2PNU3 283 aaPredicted RBP21.65■■□□□ 1.06
HOXB3-201ENST00000311626 ATXN7O15265 892 aaPredicted RBP21.65■■□□□ 1.06
HOXB3-201ENST00000311626 FBP1P09467 338 aa21.65■■□□□ 1.06
HOXB3-201ENST00000311626 ABHD17BQ5VST6 288 aa21.65■■□□□ 1.06
HOXB3-201ENST00000311626 MKXQ8IYA7 352 aa21.65■■□□□ 1.06
HOXB3-201ENST00000311626 PRR18Q8N4B5 295 aa21.65■■□□□ 1.06
HOXB3-201ENST00000311626 FAM24BQ8N5W8 94 aa21.65■■□□□ 1.06
HOXB3-201ENST00000311626 SUMF2Q8NBJ7 301 aa21.65■■□□□ 1.06
HOXB3-201ENST00000311626 TMEM56Q96MV1 263 aa21.65■■□□□ 1.06
HOXB3-201ENST00000311626 TMEM56-RWDD3S4R434 201 aa21.65■■□□□ 1.06
HOXB3-201ENST00000311626 TMEM265A0A087WTH1 108 aa21.65■■□□□ 1.06
HOXB3-201ENST00000311626 CHST1O43916 411 aa21.65■■□□□ 1.06
HOXB3-201ENST00000311626 OR1C1Q15619 314 aa21.65■■□□□ 1.06
HOXB3-201ENST00000311626 IL1F10Q8WWZ1 152 aa21.65■■□□□ 1.06
HOXB3-201ENST00000311626 FAM173AQ9BQD7 235 aa21.65■■□□□ 1.06
HOXB3-201ENST00000311626 TTTY12Q9BZ98 90 aa21.65■■□□□ 1.06
HOXB3-201ENST00000311626 PRSS50Q9UI38 385 aa21.65■■□□□ 1.06
HOXB3-201ENST00000311626 RHBDL1O75783 438 aa21.64■■□□□ 1.06
HOXB3-201ENST00000311626 EIF3GO75821 320 aaKnown RBP eCLIP21.64■■□□□ 1.06
HOXB3-201ENST00000311626 SYNGR4O95473 234 aa21.64■■□□□ 1.06
HOXB3-201ENST00000311626 CDS2O95674 445 aa21.64■■□□□ 1.06
HOXB3-201ENST00000311626 UCP2P55851 309 aa21.64■■□□□ 1.06
HOXB3-201ENST00000311626 C15orf54Q8N8G6 183 aa21.64■■□□□ 1.06
HOXB3-201ENST00000311626 KCNJ16Q9NPI9 418 aa21.64■■□□□ 1.06
HOXB3-201ENST00000311626 IGKV3D-15A0A087WSY6 115 aa21.64■■□□□ 1.05
HOXB3-201ENST00000311626 CD300LBA8K4G0 201 aa21.64■■□□□ 1.05
HOXB3-201ENST00000311626 HAGHQ16775 308 aa21.64■■□□□ 1.05
HOXB3-201ENST00000311626 RBMS3Q6XE24 437 aaKnown RBP21.64■■□□□ 1.05
HOXB3-201ENST00000311626 C1orf210Q8IVY1 113 aa21.64■■□□□ 1.05
HOXB3-201ENST00000311626 PLPPR1Q8TBJ4 325 aa21.64■■□□□ 1.05
HOXB3-201ENST00000311626 PTAFRP25105 342 aa21.63■■□□□ 1.05
HOXB3-201ENST00000311626 PLGLB1Q02325 96 aa21.63■■□□□ 1.05
HOXB3-201ENST00000311626 Q8NFD4 153 aa21.63■■□□□ 1.05
HOXB3-201ENST00000311626 APOBEC3DQ96AK3 386 aaPredicted RBP21.63■■□□□ 1.05
HOXB3-201ENST00000311626 RAB5BP61020 215 aa21.63■■□□□ 1.05
HOXB3-201ENST00000311626 OR2T2Q6IF00 324 aa21.63■■□□□ 1.05
HOXB3-201ENST00000311626 TMEM251Q8N6I4 163 aa21.63■■□□□ 1.05
HOXB3-201ENST00000311626 HIST1H2AAQ96QV6 131 aa21.63■■□□□ 1.05
HOXB3-201ENST00000311626 PLEKHF2Q9H8W4 249 aa21.63■■□□□ 1.05
HOXB3-201ENST00000311626 MRPS18CQ9Y3D5 142 aaKnown RBP21.63■■□□□ 1.05
HOXB3-201ENST00000311626 STRAPQ9Y3F4 350 aaKnown RBP21.63■■□□□ 1.05
HOXB3-201ENST00000311626 MRPL30Q8TCC3 161 aaKnown RBP21.62■■□□□ 1.05
HOXB3-201ENST00000311626 APH1AQ96BI3 265 aa21.62■■□□□ 1.05
HOXB3-201ENST00000311626 SLC35B3Q9H1N7 401 aa21.62■■□□□ 1.05
HOXB3-201ENST00000311626 C1orf196B1AJZ1 125 aa21.62■■□□□ 1.05
HOXB3-201ENST00000311626 PGLYRP1O75594 196 aaPredicted RBP21.62■■□□□ 1.05
HOXB3-201ENST00000311626 CA6P23280 308 aa21.62■■□□□ 1.05
HOXB3-201ENST00000311626 WNT5AP41221 380 aa21.62■■□□□ 1.05
HOXB3-201ENST00000311626 P4HA3Q7Z4N8 544 aa21.62■■□□□ 1.05
HOXB3-201ENST00000311626 POM121L2Q96KW2 1035 aa21.62■■□□□ 1.05
HOXB3-201ENST00000311626 COLQQ9Y215 455 aaPredicted RBP21.62■■□□□ 1.05
HOXB3-201ENST00000311626 ACP1P24666 158 aa21.61■■□□□ 1.05
HOXB3-201ENST00000311626 LMO1P25800 156 aa21.61■■□□□ 1.05
HOXB3-201ENST00000311626 NMSQ5H8A3 153 aa21.61■■□□□ 1.05
HOXB3-201ENST00000311626 RNF122Q9H9V4 155 aa21.61■■□□□ 1.05
HOXB3-201ENST00000311626 LYRM2Q9NU23 88 aaPredicted RBP21.61■■□□□ 1.05
HOXB3-201ENST00000311626 OR1A1Q9P1Q5 309 aa21.61■■□□□ 1.05
HOXB3-201ENST00000311626 DIDO1Q9BTC0 2240 aaKnown RBP21.61■■□□□ 1.05
HOXB3-201ENST00000311626 TRAV24A0A0B4J272 114 aa21.61■■□□□ 1.05
HOXB3-201ENST00000311626 A0A1W2PR80 420 aa21.61■■□□□ 1.05
HOXB3-201ENST00000311626 OR2B8PP59922 312 aa21.61■■□□□ 1.05
HOXB3-201ENST00000311626 ADAM5Q6NVV9 412 aa21.61■■□□□ 1.05
HOXB3-201ENST00000311626 PCSK4Q6UW60 755 aa21.61■■□□□ 1.05
HOXB3-201ENST00000311626 FAM185AQ8N0U4 392 aa21.61■■□□□ 1.05
HOXB3-201ENST00000311626 COMMD1Q8N668 190 aa21.61■■□□□ 1.05
HOXB3-201ENST00000311626 LINC00470Q9BZP3 86 aa21.61■■□□□ 1.05
HOXB3-201ENST00000311626 ERRFI1Q9UJM3 462 aaPredicted RBP21.61■■□□□ 1.05
HOXB3-201ENST00000311626 ATP23Q9Y6H3 246 aa21.61■■□□□ 1.05
HOXB3-201ENST00000311626 LOC400499M0QZD8 3231 aa21.61■■□□□ 1.05
HOXB3-201ENST00000311626 TUSC2O75896 110 aa21.6■■□□□ 1.05
HOXB3-201ENST00000311626 SULT1A1P50225 295 aa21.6■■□□□ 1.05
HOXB3-201ENST00000311626 HMGN3Q15651 99 aa21.6■■□□□ 1.05
HOXB3-201ENST00000311626 SPSB3Q6PJ21 355 aa21.6■■□□□ 1.05
HOXB3-201ENST00000311626 TAAR3PQ9P1P4 343 aa21.6■■□□□ 1.05
HOXB3-201ENST00000311626 LIPGQ9Y5X9 500 aa21.6■■□□□ 1.05
HOXB3-201ENST00000311626 KIAA2026Q5HYC2 2103 aa21.6■■□□□ 1.05
HOXB3-201ENST00000311626 MED12LQ86YW9 2145 aa21.6■■□□□ 1.05
HOXB3-201ENST00000311626 PMELP40967 661 aa21.6■■□□□ 1.05
HOXB3-201ENST00000311626 MEOX2P50222 304 aa21.6■■□□□ 1.05
HOXB3-201ENST00000311626 SRPXP78539 464 aa21.6■■□□□ 1.05
HOXB3-201ENST00000311626 TAAR9Q96RI9 348 aa21.6■■□□□ 1.05
HOXB3-201ENST00000311626 ARRDC1-AS1Q9H2J1 176 aa21.6■■□□□ 1.05
HOXB3-201ENST00000311626 PITX3O75364 302 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms