RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 PTPRQQ9UMZ3 2332 aa17.94■□□□□ 0.46
ATG4D-201ENST00000309469 IGLV3-9A0A075B6K5 115 aa17.94■□□□□ 0.46
ATG4D-201ENST00000309469 hCG_1807616A0A1W2PRN6 198 aa17.94■□□□□ 0.46
ATG4D-201ENST00000309469 ZSCAN5BA6NJL1 495 aa17.94■□□□□ 0.46
ATG4D-201ENST00000309469 TUSC2O75896 110 aa17.94■□□□□ 0.46
ATG4D-201ENST00000309469 LMO1P25800 156 aa17.94■□□□□ 0.46
ATG4D-201ENST00000309469 CEBPDP49716 269 aaPredicted RBP17.94■□□□□ 0.46
ATG4D-201ENST00000309469 RND1Q92730 232 aa17.94■□□□□ 0.46
ATG4D-201ENST00000309469 GALNT14Q96FL9 552 aa17.94■□□□□ 0.46
ATG4D-201ENST00000309469 PCDHB10Q9UN67 800 aa17.94■□□□□ 0.46
ATG4D-201ENST00000309469 BSNQ9UPA5 3926 aa17.94■□□□□ 0.46
ATG4D-201ENST00000309469 PIEZO2Q9H5I5 2752 aa17.94■□□□□ 0.46
ATG4D-201ENST00000309469 MPTX1A8MV57 137 aa17.94■□□□□ 0.46
ATG4D-201ENST00000309469 PTBP3O95758 552 aaKnown RBP17.94■□□□□ 0.46
ATG4D-201ENST00000309469 HOXB5P09067 269 aa17.94■□□□□ 0.46
ATG4D-201ENST00000309469 PSMB6P28072 239 aa17.94■□□□□ 0.46
ATG4D-201ENST00000309469 PCSK4Q6UW60 755 aa17.94■□□□□ 0.46
ATG4D-201ENST00000309469 VKORC1Q9BQB6 163 aa17.94■□□□□ 0.46
ATG4D-201ENST00000309469 AP2S1P53680 142 aaPredicted RBP17.93■□□□□ 0.46
ATG4D-201ENST00000309469 HOXA4Q00056 320 aaPredicted RBP17.93■□□□□ 0.46
ATG4D-201ENST00000309469 KLRB1Q12918 225 aa17.93■□□□□ 0.46
ATG4D-201ENST00000309469 TMEM108Q6UXF1 575 aa17.93■□□□□ 0.46
ATG4D-201ENST00000309469 MOB1BQ7L9L4 216 aa17.93■□□□□ 0.46
ATG4D-201ENST00000309469 CCDC71LQ8N9Z2 235 aa17.93■□□□□ 0.46
ATG4D-201ENST00000309469 OR11L1Q8NGX0 322 aa17.93■□□□□ 0.46
ATG4D-201ENST00000309469 THAP6Q8TBB0 222 aa17.93■□□□□ 0.46
ATG4D-201ENST00000309469 OR10C1Q96KK4 312 aa17.93■□□□□ 0.46
ATG4D-201ENST00000309469 C2orf50Q96LR7 162 aa17.93■□□□□ 0.46
ATG4D-201ENST00000309469 DMRTA2Q96SC8 542 aa17.93■□□□□ 0.46
ATG4D-201ENST00000309469 TNFSF18Q9UNG2 199 aa17.93■□□□□ 0.46
ATG4D-201ENST00000309469 OR5AC1P0C628 307 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 GNRHRP30968 328 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 KCNJ3P48549 501 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 TMEM187Q14656 261 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 ATXN7L3Q14CW9 347 aaPredicted RBP17.92■□□□□ 0.46
ATG4D-201ENST00000309469 SP6Q3SY56 376 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 WFDC8Q8IUA0 241 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 PRR7Q8TB68 274 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 TAAR3PQ9P1P4 343 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 TRAPPC2LQ9UL33 140 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 TRBV6-7A0A0A0MS04 114 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 A0A0D9SG52 128 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 PSPNO60542 156 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 PTAFRP25105 342 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 CLLU1Q5K131 121 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 THOC7Q6I9Y2 204 aaKnown RBP17.92■□□□□ 0.46
ATG4D-201ENST00000309469 ZNF565Q8N9K5 539 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 LRRC29Q8WV35 223 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 VRK1Q99986 396 aaPredicted RBP17.92■□□□□ 0.46
ATG4D-201ENST00000309469 CABLES2Q9BTV7 478 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 SUCNR1Q9BXA5 334 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 MRPL37Q9BZE1 423 aaKnown RBP17.92■□□□□ 0.46
ATG4D-201ENST00000309469 WIPI2Q9Y4P8 454 aa17.92■□□□□ 0.46
ATG4D-201ENST00000309469 TRAV39A0A0B4J263 110 aa17.91■□□□□ 0.46
ATG4D-201ENST00000309469 TRGV8A0A0C4DH27 118 aa17.91■□□□□ 0.46
ATG4D-201ENST00000309469 RPS10-NUDT3A0A1W2PQS6 291 aa17.91■□□□□ 0.46
ATG4D-201ENST00000309469 SELENOVP59797 346 aa17.91■□□□□ 0.46
ATG4D-201ENST00000309469 RAB14P61106 215 aa17.91■□□□□ 0.46
ATG4D-201ENST00000309469 ZNF345Q14585 488 aa17.91■□□□□ 0.46
ATG4D-201ENST00000309469 SMIM21Q3B7S5 101 aa17.91■□□□□ 0.46
ATG4D-201ENST00000309469 SSX8Q7RTT4 187 aa17.91■□□□□ 0.46
ATG4D-201ENST00000309469 FAM185AQ8N0U4 392 aa17.91■□□□□ 0.46
ATG4D-201ENST00000309469 NUP37Q8NFH4 326 aa17.91■□□□□ 0.46
ATG4D-201ENST00000309469 OR10J5Q8NHC4 309 aa17.91■□□□□ 0.46
ATG4D-201ENST00000309469 SECTM1Q8WVN6 248 aa17.91■□□□□ 0.46
ATG4D-201ENST00000309469 KIRREL1Q96J84 757 aa17.91■□□□□ 0.46
ATG4D-201ENST00000309469 CITED4Q96RK1 184 aa17.91■□□□□ 0.46
ATG4D-201ENST00000309469 LINC00862A6NCI5 91 aa17.9■□□□□ 0.46
ATG4D-201ENST00000309469 THBDP07204 575 aa17.9■□□□□ 0.46
ATG4D-201ENST00000309469 C1QTNF9P0C862 333 aa17.9■□□□□ 0.46
ATG4D-201ENST00000309469 MEGF10Q96KG7 1140 aa17.9■□□□□ 0.46
ATG4D-201ENST00000309469 SLC5A7Q9GZV3 580 aa17.9■□□□□ 0.46
ATG4D-201ENST00000309469 MBNL3Q9NUK0 354 aaKnown RBP17.9■□□□□ 0.46
ATG4D-201ENST00000309469 MBD2Q9UBB5 411 aa17.9■□□□□ 0.46
ATG4D-201ENST00000309469 MEMO1Q9Y316 297 aa17.9■□□□□ 0.46
ATG4D-201ENST00000309469 IGKV1D-13A0A0B4J2D9 117 aa17.9■□□□□ 0.46
ATG4D-201ENST00000309469 IFNL4K9M1U5 179 aa17.9■□□□□ 0.46
ATG4D-201ENST00000309469 MPPED1O15442 326 aa17.9■□□□□ 0.46
ATG4D-201ENST00000309469 SPRY3O43610 288 aa17.9■□□□□ 0.46
ATG4D-201ENST00000309469 OR2F2O95006 317 aa17.9■□□□□ 0.46
ATG4D-201ENST00000309469 IGKV1-13P0DP09 117 aa17.9■□□□□ 0.46
ATG4D-201ENST00000309469 OR2F1Q13607 317 aa17.9■□□□□ 0.46
ATG4D-201ENST00000309469 OR10Z1Q8NGY1 313 aa17.9■□□□□ 0.46
ATG4D-201ENST00000309469 OR2V2Q96R30 315 aa17.9■□□□□ 0.46
ATG4D-201ENST00000309469 GSX2Q9BZM3 304 aa17.9■□□□□ 0.46
ATG4D-201ENST00000309469 DPRXA6NFQ7 191 aa17.89■□□□□ 0.45
ATG4D-201ENST00000309469 IFNA21P01568 189 aa17.89■□□□□ 0.45
ATG4D-201ENST00000309469 CFHR2P36980 270 aa17.89■□□□□ 0.45
ATG4D-201ENST00000309469 IL15RAQ13261 267 aa17.89■□□□□ 0.45
ATG4D-201ENST00000309469 LIAT1Q6ZQX7 453 aa17.89■□□□□ 0.45
ATG4D-201ENST00000309469 LDLRAD3Q86YD5 345 aa17.89■□□□□ 0.45
ATG4D-201ENST00000309469 H1FOOQ8IZA3 346 aaPredicted RBP17.89■□□□□ 0.45
ATG4D-201ENST00000309469 KCNRGQ8N5I3 272 aa17.89■□□□□ 0.45
ATG4D-201ENST00000309469 LRTM2Q8N967 370 aa17.89■□□□□ 0.45
ATG4D-201ENST00000309469 IL1F10Q8WWZ1 152 aa17.89■□□□□ 0.45
ATG4D-201ENST00000309469 MRPL24Q96A35 216 aaKnown RBP17.89■□□□□ 0.45
ATG4D-201ENST00000309469 RNF126Q9BV68 326 aa17.89■□□□□ 0.45
ATG4D-201ENST00000309469 TMEM30CPA0ZSE6 113 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 NPIPB11E5RHQ5 1161 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 GPR31O00270 319 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms