RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 CNN3Q15417 329 aaKnown RBP12.44□□□□□ -0.42
SCUBE2-201ENST00000309263 SGCZQ96LD1 299 aa12.44□□□□□ -0.42
SCUBE2-201ENST00000309263 PRDM13Q9H4Q3 707 aa12.44□□□□□ -0.42
SCUBE2-201ENST00000309263 CCL28Q9NRJ3 127 aa12.44□□□□□ -0.42
SCUBE2-201ENST00000309263 ABCA4P78363 2273 aa12.44□□□□□ -0.42
SCUBE2-201ENST00000309263 SNRPCP09234 159 aaKnown RBP12.44□□□□□ -0.42
SCUBE2-201ENST00000309263 METTL15P1P0C7V9 234 aa12.44□□□□□ -0.42
SCUBE2-201ENST00000309263 ZNF787Q6DD87 383 aa12.44□□□□□ -0.42
SCUBE2-201ENST00000309263 C18orf12Q96KH6 178 aa12.44□□□□□ -0.42
SCUBE2-201ENST00000309263 FOXD3Q9UJU5 478 aaPredicted RBP12.44□□□□□ -0.42
SCUBE2-201ENST00000309263 COL6A6A6NMZ7 2263 aa12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 PMELP40967 661 aa12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 SUCLG1P53597 346 aaKnown RBP12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 HIST3H2BBQ8N257 126 aa12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 OR1K1Q8NGR3 316 aa12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 ABHD5Q8WTS1 349 aa12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 SPIN2AQ99865 258 aa12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 SPIN2BQ9BPZ2 258 aa12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 LAMP3Q9UQV4 416 aa12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 TMEM50AO95807 157 aa12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 IFNA10P01566 189 aa12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 EDN3P14138 238 aa12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 FOSL1P15407 271 aa12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 RSPO1Q2MKA7 263 aaPredicted RBP12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 ZNF100Q8IYN0 542 aa12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 TMEM37Q8WXS4 190 aa12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 MALSU1Q96EH3 234 aa12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 ATG101Q9BSB4 218 aa12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 FREM1Q5H8C1 2179 aa12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 EML6Q6ZMW3 1958 aa12.43□□□□□ -0.42
SCUBE2-201ENST00000309263 AQP7P3A6NL99 342 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 HS3ST1O14792 307 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 SERPINE2P07093 398 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 SRFP11831 508 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 ZNF32P17041 273 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 CCL1P22362 96 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 ZNF818PQ6ZRF7 136 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 MAML2Q8IZL2 1156 aaPredicted RBP12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 LILRB2Q8N423 598 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 OR2M3Q8NG83 312 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 ZNF501Q96CX3 271 aaPredicted RBP12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 RASL10BQ96S79 203 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 ARV1Q9H2C2 271 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 VSIRQ9H7M9 311 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 ATMQ13315 3056 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 A0A1W2PPQ1 181 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 TRAPPC6AO75865 159 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 ZNF468Q5VIY5 522 aaPredicted RBP12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 BEND4Q6ZU67 534 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 CALHM1Q8IU99 346 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 ZNF611Q8N823 705 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 RDH5Q92781 318 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 EXTL1Q92935 676 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 CALHM2Q9HA72 323 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 AURKAIP1Q9NWT8 199 aaPredicted RBP12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 IL36RNQ9UBH0 155 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 FOXI3A8MTJ6 420 aaPredicted RBP12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 TRDCB7Z8K6 153 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 SUMO3P55854 103 aaPredicted RBP12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 MLF1P58340 268 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 CLN3Q13286 438 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 OR8G2PQ6IF36 304 aa12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 YRDCQ86U90 279 aaKnown RBP12.42□□□□□ -0.42
SCUBE2-201ENST00000309263 CLDN34H7C241 214 aa12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 GLIPR1P48060 266 aa12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 LSM6P62312 80 aaKnown RBP12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 D2HGDHQ8N465 521 aa12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 MOB3AQ96BX8 217 aa12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 NOSIPQ9Y314 301 aaKnown RBP12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 A0A0U1RQV5 110 aa12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 NPIPB13A6NJU9 1138 aa12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 NPIPB4C9JG80 1138 aa12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 RRP8O43159 456 aaKnown RBP12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 PDCD6O75340 191 aa12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 PTBP3O95758 552 aaKnown RBP12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 CD55P08174 381 aa12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 SLC16A14Q7RTX9 510 aa12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 SPACA9Q96E40 222 aaPredicted RBP12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 GNPNAT1Q96EK6 184 aaPredicted RBP12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 MISP3Q96FF7 219 aa12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 TMEM222Q9H0R3 208 aa12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 WASF3Q9UPY6 502 aa12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 IGHV1OR15-9A0A0B4J2B8 117 aa12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 ZNF92Q03936 586 aa12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 C1QL4Q86Z23 238 aa12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 OR4D5Q8NGN0 318 aa12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 RPRMQ9NS64 109 aa12.41□□□□□ -0.42
SCUBE2-201ENST00000309263 IGKV1D-13A0A0B4J2D9 117 aa12.4□□□□□ -0.42
SCUBE2-201ENST00000309263 SOX15O60248 233 aa12.4□□□□□ -0.42
SCUBE2-201ENST00000309263 IGKV1-13P0DP09 117 aa12.4□□□□□ -0.42
SCUBE2-201ENST00000309263 NR2C1P13056 603 aa12.4□□□□□ -0.42
SCUBE2-201ENST00000309263 CD27P26842 260 aa12.4□□□□□ -0.42
SCUBE2-201ENST00000309263 IL2RGP31785 369 aa12.4□□□□□ -0.42
SCUBE2-201ENST00000309263 CLDND2Q8NHS1 167 aa12.4□□□□□ -0.42
SCUBE2-201ENST00000309263 SSC4DQ8WTU2 575 aa12.4□□□□□ -0.42
SCUBE2-201ENST00000309263 SPSB1Q96BD6 273 aa12.4□□□□□ -0.42
SCUBE2-201ENST00000309263 SMIM7Q9BQ49 75 aa12.4□□□□□ -0.42
SCUBE2-201ENST00000309263 LYRM2Q9NU23 88 aaPredicted RBP12.4□□□□□ -0.42
SCUBE2-201ENST00000309263 PLA2G3Q9NZ20 509 aa12.4□□□□□ -0.42
SCUBE2-201ENST00000309263 KCNS2Q9ULS6 477 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms