RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 TRGV8A0A0C4DH27 118 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 IGHA2P01877 340 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 GZMBP10144 247 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 ARR3P36575 388 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 GPM6AP51674 278 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 CNRIP1Q96F85 164 aaPredicted RBP13.51□□□□□ -0.25
LEMD3-201ENST00000308330 GAGE12BA1L429 117 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 SPINT1O43278 529 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 SSSCA1O60232 199 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 ZNF737O75373 536 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 IL2RAP01589 272 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 CHRM2P08172 466 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 SELEP16581 610 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 PMELP40967 661 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 PHLDA2Q53GA4 152 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 ATAD5Q96QE3 1844 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 VAMP5O95183 116 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 HSPB1P04792 205 aaKnown RBP13.5□□□□□ -0.25
LEMD3-201ENST00000308330 COX19Q49B96 90 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 SLC25A26Q70HW3 274 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 GBGT1Q8N5D6 347 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 SLC25A43Q8WUT9 341 aaPredicted RBP13.5□□□□□ -0.25
LEMD3-201ENST00000308330 A4GALTQ9NPC4 353 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 CGGBP1Q9UFW8 167 aaPredicted RBP13.5□□□□□ -0.25
LEMD3-201ENST00000308330 ANKRD30BLA7E2S9 258 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 SLC2A10O95528 541 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 GPR12P47775 334 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 TEX29Q8N6K0 151 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 OR51A2Q8NGJ7 313 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 ANKRD9Q96BM1 317 aaPredicted RBP13.5□□□□□ -0.25
LEMD3-201ENST00000308330 OR10A2Q9H208 303 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 SLC6A13Q9NSD5 602 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 ELOVL5Q9NYP7 299 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 SPCS1Q9Y6A9 102 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 RBFOX2O43251 390 aaKnown RBP eCLIP13.5□□□□□ -0.25
LEMD3-201ENST00000308330 CCL4P13236 92 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 ID4P47928 161 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 RBM11P57052 281 aaKnown RBP13.5□□□□□ -0.25
LEMD3-201ENST00000308330 C1orf140Q5VVS0 124 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 BCORP1Q8N888 145 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 KCNG3Q8TAE7 436 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 PRDM13Q9H4Q3 707 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 ZFC3H1O60293 1989 aaKnown RBP13.5□□□□□ -0.25
LEMD3-201ENST00000308330 MELTFP08582 738 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 RPS4Y1P22090 263 aaKnown RBP13.5□□□□□ -0.25
LEMD3-201ENST00000308330 TMEM144Q7Z5S9 345 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 DUSP13Q9UII6 198 aa13.5□□□□□ -0.25
LEMD3-201ENST00000308330 INTS1Q8N201 2190 aaKnown RBP13.49□□□□□ -0.25
LEMD3-201ENST00000308330 SPINK4O60575 86 aa13.49□□□□□ -0.25
LEMD3-201ENST00000308330 CDC14BO60729 498 aa13.49□□□□□ -0.25
LEMD3-201ENST00000308330 ATP5IP56385 69 aaPredicted RBP13.49□□□□□ -0.25
LEMD3-201ENST00000308330 OR1N2Q8NGR9 330 aa13.49□□□□□ -0.25
LEMD3-201ENST00000308330 SLC25A28Q96A46 364 aa13.49□□□□□ -0.25
LEMD3-201ENST00000308330 TIMM10BQ9Y5J6 103 aa13.49□□□□□ -0.25
LEMD3-201ENST00000308330 A0A087WWC5 75 aa13.49□□□□□ -0.25
LEMD3-201ENST00000308330 WNT11O96014 354 aa13.49□□□□□ -0.25
LEMD3-201ENST00000308330 C1QAP02745 245 aa13.49□□□□□ -0.25
LEMD3-201ENST00000308330 GAPDHP04406 335 aaKnown RBP13.49□□□□□ -0.25
LEMD3-201ENST00000308330 KLHDC3Q9BQ90 382 aa13.49□□□□□ -0.25
LEMD3-201ENST00000308330 FAM60AQ9NP50 221 aa13.49□□□□□ -0.25
LEMD3-201ENST00000308330 MRPS28Q9Y2Q9 187 aaKnown RBP13.49□□□□□ -0.25
LEMD3-201ENST00000308330 NXPH3O95157 252 aa13.49□□□□□ -0.25
LEMD3-201ENST00000308330 RPEL1Q2QD12 228 aa13.49□□□□□ -0.25
LEMD3-201ENST00000308330 TMEM249Q2WGJ8 235 aa13.49□□□□□ -0.25
LEMD3-201ENST00000308330 BANF2Q9H503 90 aa13.49□□□□□ -0.25
LEMD3-201ENST00000308330 OBP2BQ9NPH6 170 aa13.49□□□□□ -0.25
LEMD3-201ENST00000308330 PLA2G3Q9NZ20 509 aa13.49□□□□□ -0.25
LEMD3-201ENST00000308330 CST7O76096 145 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 TBX6O95947 436 aaPredicted RBP13.48□□□□□ -0.25
LEMD3-201ENST00000308330 ADH4P08319 380 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 TMEM97Q5BJF2 176 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 PWWP2BQ6NUJ5 590 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 ZNF788Q6ZQV5 615 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 ATOH7Q8N100 152 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 D2HGDHQ8N465 521 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 COL25A1Q9BXS0 654 aaPredicted RBP13.48□□□□□ -0.25
LEMD3-201ENST00000308330 MANBALQ9NQG1 85 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 COX11Q9Y6N1 276 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 FIGNL2A6NMB9 653 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 IGHV4-34P06331 123 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 FUT3P21217 361 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 WNT5AP41221 380 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 ROM1Q03395 351 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 DPRXA6NFQ7 191 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 IGHV2-5P01817 119 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 PRR35P0CG20 571 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 GLI4P10075 376 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 LTBRP36941 435 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 GDF7Q7Z4P5 450 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 TMEM255BQ8WV15 326 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 OR2A5Q96R48 311 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 VN1R1Q9GZP7 353 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 LSM2Q9Y333 95 aaKnown RBP13.48□□□□□ -0.25
LEMD3-201ENST00000308330 A0A087WUU8 490 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 A0A1W2PNR3 127 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 OGG1O15527 345 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 SNCGO76070 127 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 MT-ATP6P00846 226 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 STPG1Q5TH74 334 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 SLC25A42Q86VD7 318 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms