RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 LGALS1P09382 135 aaKnown RBP9.06□□□□□ -0.96
SMIM4-201ENST00000307106 FSTP19883 344 aa9.06□□□□□ -0.96
SMIM4-201ENST00000307106 CD1BP29016 333 aa9.06□□□□□ -0.96
SMIM4-201ENST00000307106 C21orf33P30042 268 aaPredicted RBP9.06□□□□□ -0.96
SMIM4-201ENST00000307106 HTR1FP30939 366 aa9.06□□□□□ -0.96
SMIM4-201ENST00000307106 GALEQ14376 348 aa9.06□□□□□ -0.96
SMIM4-201ENST00000307106 GINS1Q14691 196 aa9.06□□□□□ -0.96
SMIM4-201ENST00000307106 Q6P435 159 aa9.06□□□□□ -0.96
SMIM4-201ENST00000307106 SLC16A12Q6ZSM3 486 aa9.06□□□□□ -0.96
SMIM4-201ENST00000307106 CHST4Q8NCG5 386 aa9.06□□□□□ -0.96
SMIM4-201ENST00000307106 RFESDQ8TAC1 157 aa9.06□□□□□ -0.96
SMIM4-201ENST00000307106 MNTQ99583 582 aa9.06□□□□□ -0.96
SMIM4-201ENST00000307106 APOL4Q9BPW4 351 aa9.06□□□□□ -0.96
SMIM4-201ENST00000307106 ELOVL1Q9BW60 279 aa9.06□□□□□ -0.96
SMIM4-201ENST00000307106 LINC00574Q9H8X3 128 aa9.06□□□□□ -0.96
SMIM4-201ENST00000307106 FGFR1OP2Q9NVK5 253 aa9.06□□□□□ -0.96
SMIM4-201ENST00000307106 KIF25Q9UIL4 384 aa9.06□□□□□ -0.96
SMIM4-201ENST00000307106 CEPT1Q9Y6K0 416 aa9.06□□□□□ -0.96
SMIM4-201ENST00000307106 TRAV41A0A0B4J266 112 aa9.05□□□□□ -0.96
SMIM4-201ENST00000307106 HSPB6O14558 160 aa9.05□□□□□ -0.96
SMIM4-201ENST00000307106 BRI3O95415 125 aa9.05□□□□□ -0.96
SMIM4-201ENST00000307106 HMGN1P05114 100 aa9.05□□□□□ -0.96
SMIM4-201ENST00000307106 MTCP1P56278 107 aa9.05□□□□□ -0.96
SMIM4-201ENST00000307106 CXCR4P61073 352 aa9.05□□□□□ -0.96
SMIM4-201ENST00000307106 ACTR3P61158 418 aa9.05□□□□□ -0.96
SMIM4-201ENST00000307106 ZNF322Q6U7Q0 402 aaPredicted RBP9.05□□□□□ -0.96
SMIM4-201ENST00000307106 CD300LDQ6UXZ3 194 aa9.05□□□□□ -0.96
SMIM4-201ENST00000307106 GTSCR1Q86UQ5 136 aa9.05□□□□□ -0.96
SMIM4-201ENST00000307106 DNAAF1Q8NEP3 725 aa9.05□□□□□ -0.96
SMIM4-201ENST00000307106 OR10A7Q8NGE5 316 aa9.05□□□□□ -0.96
SMIM4-201ENST00000307106 OR51T1Q8NGJ9 327 aa9.05□□□□□ -0.96
SMIM4-201ENST00000307106 RTN4IP1Q8WWV3 396 aaPredicted RBP9.05□□□□□ -0.96
SMIM4-201ENST00000307106 FLYWCH2Q96CP2 140 aaKnown RBP9.05□□□□□ -0.96
SMIM4-201ENST00000307106 NABP2Q9BQ15 211 aa9.05□□□□□ -0.96
SMIM4-201ENST00000307106 ZCCHC4Q9H5U6 513 aa9.05□□□□□ -0.96
SMIM4-201ENST00000307106 PARP11Q9NR21 331 aa9.05□□□□□ -0.96
SMIM4-201ENST00000307106 SAMHD1Q9Y3Z3 626 aaKnown RBP9.05□□□□□ -0.96
SMIM4-201ENST00000307106 IGKV1-12A0A0C4DH73 117 aa9.04□□□□□ -0.96
SMIM4-201ENST00000307106 DEGS1O15121 323 aa9.04□□□□□ -0.96
SMIM4-201ENST00000307106 IGKV1D-12P01611 117 aa9.04□□□□□ -0.96
SMIM4-201ENST00000307106 HSPB1P04792 205 aaKnown RBP9.04□□□□□ -0.96
SMIM4-201ENST00000307106 HSD17B1P14061 328 aa9.04□□□□□ -0.96
SMIM4-201ENST00000307106 SSTR5P35346 364 aa9.04□□□□□ -0.96
SMIM4-201ENST00000307106 PDZK1IP1Q13113 114 aa9.04□□□□□ -0.96
SMIM4-201ENST00000307106 YIPF7Q8N8F6 280 aa9.04□□□□□ -0.96
SMIM4-201ENST00000307106 OR10G2Q8NGC3 310 aa9.04□□□□□ -0.96
SMIM4-201ENST00000307106 MRGPRDQ8TDS7 321 aa9.04□□□□□ -0.96
SMIM4-201ENST00000307106 RFT1Q96AA3 541 aa9.04□□□□□ -0.96
SMIM4-201ENST00000307106 MBOAT4Q96T53 435 aa9.04□□□□□ -0.96
SMIM4-201ENST00000307106 REEP1Q9H902 201 aa9.04□□□□□ -0.96
SMIM4-201ENST00000307106 MRM2Q9UI43 246 aaKnown RBP9.04□□□□□ -0.96
SMIM4-201ENST00000307106 IGKV1-9A0A0C4DH69 117 aa9.03□□□□□ -0.96
SMIM4-201ENST00000307106 A0A1W2PN81 502 aa9.03□□□□□ -0.96
SMIM4-201ENST00000307106 CCDC182A6NF36 153 aa9.03□□□□□ -0.96
SMIM4-201ENST00000307106 HMGB1P1B2RPK0 211 aaPredicted RBP9.03□□□□□ -0.96
SMIM4-201ENST00000307106 H0Y980 276 aa9.03□□□□□ -0.96
SMIM4-201ENST00000307106 KDM4BO94953 1096 aa9.03□□□□□ -0.96
SMIM4-201ENST00000307106 RPP14O95059 124 aaKnown RBP9.03□□□□□ -0.96
SMIM4-201ENST00000307106 CHRNA7P36544 502 aa9.03□□□□□ -0.96
SMIM4-201ENST00000307106 MAGEA2P43356 314 aa9.03□□□□□ -0.96
SMIM4-201ENST00000307106 LINC00322Q6ZN03 302 aaPredicted RBP9.03□□□□□ -0.96
SMIM4-201ENST00000307106 MINDY2Q8NBR6 621 aa9.03□□□□□ -0.96
SMIM4-201ENST00000307106 CASTOR1Q8WTX7 329 aa9.03□□□□□ -0.96
SMIM4-201ENST00000307106 PP6455Q8WZ26 134 aa9.03□□□□□ -0.96
SMIM4-201ENST00000307106 CNN2Q99439 309 aaKnown RBP9.03□□□□□ -0.96
SMIM4-201ENST00000307106 FEVQ99581 238 aa9.03□□□□□ -0.96
SMIM4-201ENST00000307106 THAP7Q9BT49 309 aaPredicted RBP9.03□□□□□ -0.96
SMIM4-201ENST00000307106 ADI1Q9BV57 179 aa9.03□□□□□ -0.96
SMIM4-201ENST00000307106 NCOR1P1Q9H4R4 102 aa9.03□□□□□ -0.96
SMIM4-201ENST00000307106 CXorf65A6NEN9 183 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 NUPR2A6NF83 97 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 H0YJX3 145 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 SOX15O60248 233 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 DEDDO75618 318 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 RGS11O94810 467 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 IGHV3-11P01762 117 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 PRKACBP22694 351 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 IL3RAP26951 378 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 BLVRBP30043 206 aaPredicted RBP9.02□□□□□ -0.97
SMIM4-201ENST00000307106 CDK5Q00535 292 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 PMS2P11Q13670 270 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 CDK5R1Q15078 307 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 MMDQ15546 238 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 ECSCRQ19T08 205 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 PAN3Q58A45 887 aaKnown RBP9.02□□□□□ -0.97
SMIM4-201ENST00000307106 OR2T5Q6IEZ7 315 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 LINC00311Q8N616 119 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 CCDC54Q8NEL0 328 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 OR5D18Q8NGL1 313 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 OR2T29Q8NH02 315 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 C10orf35Q96D05 121 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 LRGUKQ96M69 825 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 OPALINQ96PE5 141 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 BARHL1Q9BZE3 327 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 PLEKHA3Q9HB20 300 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 RHOFQ9HBH0 211 aa9.02□□□□□ -0.97
SMIM4-201ENST00000307106 IGHV7-81A0A0B4J1V7 117 aa9.01□□□□□ -0.97
SMIM4-201ENST00000307106 TRAV39A0A0B4J263 110 aa9.01□□□□□ -0.97
SMIM4-201ENST00000307106 SHISA3A0PJX4 238 aa9.01□□□□□ -0.97
SMIM4-201ENST00000307106 ARPC1BO15143 372 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms