RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 FAM90A12PA8MX19 464 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 FAM90A5PA8MXJ8 464 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 FAM90A23PA8MXZ1 464 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 TRDCB7Z8K6 153 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 FAM87AP0C7U9 286 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 FAM90A15PP0C7V4 464 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 FAM90A13PP0C7W8 464 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 FAM90A14PP0C7W9 464 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 FAM90A24PP0C7X0 464 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 BEND4Q6ZU67 534 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 C11orf53Q8IXP5 236 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 TPRX1Q8N7U7 411 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 OR8G5Q8NG78 346 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 SYT3Q9BQG1 590 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 PARP12Q9H0J9 701 aaKnown RBP9.64□□□□□ -0.87
SCG2-201ENST00000305409 WASF3Q9UPY6 502 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 TMA7Q9Y2S6 64 aaKnown RBP9.64□□□□□ -0.87
SCG2-201ENST00000305409 KCNIP3Q9Y2W7 256 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 A0A0D9SG52 128 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 I3L521 148 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 PSPNO60542 156 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 OR2F2O95006 317 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 CRYABP02511 175 aaKnown RBP9.64□□□□□ -0.87
SCG2-201ENST00000305409 PGA5P0DJD9 388 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 GCH1P30793 250 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 OR2F1Q13607 317 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 P2RY6Q15077 328 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 ESCO2Q56NI9 601 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 LINC00469Q8N7U9 141 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 C1orf162Q8NEQ5 155 aaPredicted RBP9.64□□□□□ -0.87
SCG2-201ENST00000305409 NRIP2Q9BQI9 281 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 SLC5A7Q9GZV3 580 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 OR2S2Q9NQN1 319 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 METRNQ9UJH8 293 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 ATP23Q9Y6H3 246 aa9.64□□□□□ -0.87
SCG2-201ENST00000305409 BCL2L11O43521 198 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 NXPH3O95157 252 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 IGLV1-44P01699 117 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 ERVK11-1P61568 191 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 CYCSP99999 105 aaKnown RBP9.63□□□□□ -0.87
SCG2-201ENST00000305409 NAAAQ02083 359 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 SLC38A6Q8IZM9 456 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 Q8NA96 180 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 OR2Z1Q8NG97 314 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 OR52M1Q8NGK5 317 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 SCARB1Q8WTV0 552 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 PLK3Q9H4B4 646 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 ECI1P42126 302 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 ZNF718Q3SXZ3 478 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 TOR2AQ5JU69 321 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 PCSK4Q6UW60 755 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 TBC1D26Q86UD7 250 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 ZNF565Q8N9K5 539 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 RSRP1Q9BUV0 290 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 SMIM3Q9BZL3 60 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 ERRFI1Q9UJM3 462 aaPredicted RBP9.63□□□□□ -0.87
SCG2-201ENST00000305409 TRAPPC2LQ9UL33 140 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 POLDIP2Q9Y2S7 368 aa9.63□□□□□ -0.87
SCG2-201ENST00000305409 PROB1E7EW31 1015 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 LGALS8O00214 317 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 MPPED1O15442 326 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 IFNA21P01568 189 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 IL15RAQ13261 267 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 IL13RA2Q14627 380 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 TBR1Q16650 682 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 TMEM268Q5VZI3 342 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 DOLPP1Q86YN1 238 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 MSI2Q96DH6 328 aaKnown RBP9.62□□□□□ -0.87
SCG2-201ENST00000305409 PIK3IP1Q96FE7 263 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 ZC4H2Q9NQZ6 224 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 TREM2Q9NZC2 230 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 C3orf85A0A1B0GTC6 90 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 J3QW42 95 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 GFRA3O60609 400 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 SCO1O75880 301 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 PTBP3O95758 552 aaKnown RBP9.62□□□□□ -0.87
SCG2-201ENST00000305409 HAND1O96004 215 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 HOXB1P14653 301 aaPredicted RBP9.62□□□□□ -0.87
SCG2-201ENST00000305409 PMELP40967 661 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 AESQ08117 197 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 PRSS54Q6PEW0 395 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 LIAT1Q6ZQX7 453 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 SLC35G3Q8N808 338 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 FAM57AQ8TBR7 257 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 SPACA1Q9HBV2 294 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 COL6A6A6NMZ7 2263 aa9.62□□□□□ -0.87
SCG2-201ENST00000305409 CHD3Q12873 2000 aaKnown RBP9.61□□□□□ -0.87
SCG2-201ENST00000305409 KIR2DS1A0A191URI9 304 aa9.61□□□□□ -0.87
SCG2-201ENST00000305409 ATP6V1G2-DDX39BF2Z307 99 aa9.61□□□□□ -0.87
SCG2-201ENST00000305409 ATXN7O15265 892 aaPredicted RBP9.61□□□□□ -0.87
SCG2-201ENST00000305409 RRASP10301 218 aa9.61□□□□□ -0.87
SCG2-201ENST00000305409 KIR2DS4P43632 304 aa9.61□□□□□ -0.87
SCG2-201ENST00000305409 NHLH1Q02575 133 aa9.61□□□□□ -0.87
SCG2-201ENST00000305409 SNTB1Q13884 538 aaKnown RBP9.61□□□□□ -0.87
SCG2-201ENST00000305409 ZNF345Q14585 488 aa9.61□□□□□ -0.87
SCG2-201ENST00000305409 KIR2DS1Q14954 304 aa9.61□□□□□ -0.87
SCG2-201ENST00000305409 AANATQ16613 207 aa9.61□□□□□ -0.87
SCG2-201ENST00000305409 RGS7BPQ6MZT1 257 aaPredicted RBP9.61□□□□□ -0.87
SCG2-201ENST00000305409 WDR82Q6UXN9 313 aa9.61□□□□□ -0.87
SCG2-201ENST00000305409 OR51H1Q8NH63 302 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms