RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 CA11O75493 328 aa20.13■□□□□ 0.81
HOXC9-201ENST00000303450 CCL3L1P16619 93 aa20.13■□□□□ 0.81
HOXC9-201ENST00000303450 HNF1AP20823 631 aa20.13■□□□□ 0.81
HOXC9-201ENST00000303450 ZNF497Q6ZNH5 498 aa20.13■□□□□ 0.81
HOXC9-201ENST00000303450 TCF23Q7RTU1 214 aa20.13■□□□□ 0.81
HOXC9-201ENST00000303450 SAMD12Q8N8I0 201 aa20.13■□□□□ 0.81
HOXC9-201ENST00000303450 ZNF565Q8N9K5 539 aa20.13■□□□□ 0.81
HOXC9-201ENST00000303450 DYRK2Q92630 601 aa20.13■□□□□ 0.81
HOXC9-201ENST00000303450 SIRPDQ9H106 197 aa20.13■□□□□ 0.81
HOXC9-201ENST00000303450 COMMD3Q9UBI1 195 aa20.13■□□□□ 0.81
HOXC9-201ENST00000303450 hCG_1809904A0A1W2PP81 198 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 A0A1W2PPE2 198 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 A0A1W2PR64 198 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 A0A1W2PRV1 198 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 ZNF701M0R085 212 aaPredicted RBP20.12■□□□□ 0.81
HOXC9-201ENST00000303450 SCGNO76038 276 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 ZNF728P0DKX0 622 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 PLAC9Q5JTB6 97 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 C1orf122Q6ZSJ8 110 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 DYNC2LI1Q8TCX1 351 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 SLC25A38Q96DW6 304 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 CYYR1Q96J86 154 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 PECRQ9BY49 303 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 NDUFA13Q9P0J0 144 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 DPPA5A6NC42 116 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 INAFM1C9JVW0 142 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 MT-ND4P03905 459 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 MMP9P14780 707 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 GLP1RP43220 463 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 DYNC1I2Q13409 638 aaKnown RBP20.12■□□□□ 0.81
HOXC9-201ENST00000303450 UBE2NLQ5JXB2 153 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 MZT2AQ6P582 158 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 C1orf229Q6ZS94 237 aaPredicted RBP20.12■□□□□ 0.81
HOXC9-201ENST00000303450 RTN4RL2Q86UN3 420 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 TEX29Q8N6K0 151 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 CORO2AQ92828 525 aa20.12■□□□□ 0.81
HOXC9-201ENST00000303450 A0A075B6Q4 140 aa20.11■□□□□ 0.81
HOXC9-201ENST00000303450 Q8N7P7 452 aa20.11■□□□□ 0.81
HOXC9-201ENST00000303450 OR13A1Q8NGR1 328 aa20.11■□□□□ 0.81
HOXC9-201ENST00000303450 CCDC107Q8WV48 283 aa20.11■□□□□ 0.81
HOXC9-201ENST00000303450 UPRTQ96BW1 309 aa20.11■□□□□ 0.81
HOXC9-201ENST00000303450 GAL3ST2Q9H3Q3 398 aa20.11■□□□□ 0.81
HOXC9-201ENST00000303450 METTL8Q9H825 291 aaKnown RBP20.11■□□□□ 0.81
HOXC9-201ENST00000303450 TAS2R3Q9NYW6 316 aa20.11■□□□□ 0.81
HOXC9-201ENST00000303450 CCDC59Q9P031 241 aaKnown RBP20.11■□□□□ 0.81
HOXC9-201ENST00000303450 IL17RELQ6ZVW7 336 aa20.1■□□□□ 0.81
HOXC9-201ENST00000303450 VMO1Q7Z5L0 202 aa20.1■□□□□ 0.81
HOXC9-201ENST00000303450 GAPTQ8N292 157 aa20.1■□□□□ 0.81
HOXC9-201ENST00000303450 OR4K15Q8NH41 348 aa20.1■□□□□ 0.81
HOXC9-201ENST00000303450 MRGPRDQ8TDS7 321 aa20.1■□□□□ 0.81
HOXC9-201ENST00000303450 TBX15Q96SF7 602 aa20.1■□□□□ 0.81
HOXC9-201ENST00000303450 BEX2Q9BXY8 128 aa20.1■□□□□ 0.81
HOXC9-201ENST00000303450 SIRT7Q9NRC8 400 aa20.1■□□□□ 0.81
HOXC9-201ENST00000303450 AK3Q9UIJ7 227 aa20.1■□□□□ 0.81
HOXC9-201ENST00000303450 TRAPPC2LQ9UL33 140 aa20.1■□□□□ 0.81
HOXC9-201ENST00000303450 NSD1Q96L73 2696 aaPredicted RBP20.09■□□□□ 0.81
HOXC9-201ENST00000303450 TRAV39A0A0B4J263 110 aa20.09■□□□□ 0.81
HOXC9-201ENST00000303450 HIST1H1DP16402 221 aaKnown RBP20.09■□□□□ 0.81
HOXC9-201ENST00000303450 GNB3P16520 340 aa20.09■□□□□ 0.81
HOXC9-201ENST00000303450 DLX6P56179 175 aa20.09■□□□□ 0.81
HOXC9-201ENST00000303450 ARL6IP1Q15041 203 aa20.09■□□□□ 0.81
HOXC9-201ENST00000303450 NANPQ8TBE9 248 aa20.09■□□□□ 0.81
HOXC9-201ENST00000303450 S100A16Q96FQ6 103 aaKnown RBP20.09■□□□□ 0.81
HOXC9-201ENST00000303450 ABCG5Q9H222 651 aa20.09■□□□□ 0.81
HOXC9-201ENST00000303450 ZMAT3Q9HA38 289 aaKnown RBP20.09■□□□□ 0.81
HOXC9-201ENST00000303450 CHMP1AQ9HD42 196 aaPredicted RBP20.09■□□□□ 0.81
HOXC9-201ENST00000303450 DIABLOQ9NR28 239 aa20.09■□□□□ 0.81
HOXC9-201ENST00000303450 CDC42EP3Q9UKI2 254 aa20.09■□□□□ 0.81
HOXC9-201ENST00000303450 C17orf98A8MV24 154 aa20.08■□□□□ 0.81
HOXC9-201ENST00000303450 SRP14P37108 136 aaKnown RBP20.08■□□□□ 0.81
HOXC9-201ENST00000303450 C11orf42Q8N5U0 333 aa20.08■□□□□ 0.81
HOXC9-201ENST00000303450 DGCR14Q96DF8 476 aaKnown RBP20.08■□□□□ 0.81
HOXC9-201ENST00000303450 A0A0A6YYH2 397 aa20.07■□□□□ 0.8
HOXC9-201ENST00000303450 A6NJ64 397 aa20.07■□□□□ 0.8
HOXC9-201ENST00000303450 ZNF729A6NN14 1252 aaPredicted RBP20.07■□□□□ 0.8
HOXC9-201ENST00000303450 MFNGO00587 321 aa20.07■□□□□ 0.8
HOXC9-201ENST00000303450 RBP4P02753 201 aa20.07■□□□□ 0.8
HOXC9-201ENST00000303450 GZMHP20718 246 aa20.07■□□□□ 0.8
HOXC9-201ENST00000303450 PRTN3P24158 256 aa20.07■□□□□ 0.8
HOXC9-201ENST00000303450 ERVFRD-1P60508 538 aa20.07■□□□□ 0.8
HOXC9-201ENST00000303450 MRPS15P82914 257 aaKnown RBP20.07■□□□□ 0.8
HOXC9-201ENST00000303450 OLFML2AQ68BL7 652 aa20.07■□□□□ 0.8
HOXC9-201ENST00000303450 MRPL30Q8TCC3 161 aaKnown RBP20.07■□□□□ 0.8
HOXC9-201ENST00000303450 CMTM3Q96MX0 182 aa20.07■□□□□ 0.8
HOXC9-201ENST00000303450 CMSS1Q9BQ75 279 aaKnown RBP20.07■□□□□ 0.8
HOXC9-201ENST00000303450 RIMS4Q9H426 269 aaPredicted RBP20.07■□□□□ 0.8
HOXC9-201ENST00000303450 KCNK7Q9Y2U2 307 aa20.07■□□□□ 0.8
HOXC9-201ENST00000303450 KBTBD11-OT1A0A1B0GTJ5 212 aa20.07■□□□□ 0.8
HOXC9-201ENST00000303450 SERPINE3A8MV23 424 aa20.07■□□□□ 0.8
HOXC9-201ENST00000303450 CDNFQ49AH0 187 aa20.07■□□□□ 0.8
HOXC9-201ENST00000303450 LHX4Q969G2 390 aa20.07■□□□□ 0.8
HOXC9-201ENST00000303450 UNKLQ9H9P5 680 aaKnown RBP20.07■□□□□ 0.8
HOXC9-201ENST00000303450 CALYQ9NYX4 217 aa20.07■□□□□ 0.8
HOXC9-201ENST00000303450 TRAV40A0A0B4J280 105 aa20.06■□□□□ 0.8
HOXC9-201ENST00000303450 HPGDSO60760 199 aa20.06■□□□□ 0.8
HOXC9-201ENST00000303450 CLPXO76031 633 aa20.06■□□□□ 0.8
HOXC9-201ENST00000303450 APOA1P02647 267 aa20.06■□□□□ 0.8
HOXC9-201ENST00000303450 CD3GP09693 182 aa20.06■□□□□ 0.8
HOXC9-201ENST00000303450 IGHV1-8P0DP01 117 aa20.06■□□□□ 0.8
HOXC9-201ENST00000303450 CDK2P24941 298 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms