RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ROS1P08922 2347 aa12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 SLC33A1O00400 549 aaPredicted RBP12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 PPYP01298 95 aa12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 LY6DQ14210 128 aa12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 SECTM1Q8WVN6 248 aa12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 WDR89Q96FK6 387 aaPredicted RBP12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 LRRC46Q96FV0 321 aa12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 DMRTA2Q96SC8 542 aa12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 MRPL37Q9BZE1 423 aaKnown RBP12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 SHANK1Q9Y566 2161 aa12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 ARPC5O15511 151 aa12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 DHODHQ02127 395 aa12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 SRSF7Q16629 238 aaKnown RBP eCLIP12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 MSMPQ1L6U9 139 aa12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 LAMTOR1Q6IAA8 161 aa12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 ACP7Q6ZNF0 438 aa12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 MOB1BQ7L9L4 216 aa12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 OR10J5Q8NHC4 309 aa12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 PRR13Q9NZ81 148 aa12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 KCNIP1Q9NZI2 227 aa12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 JKAMPQ9P055 326 aa12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 RBM7Q9Y580 266 aaKnown RBP12.27□□□□□ -0.45
SHCBP1-201ENST00000303383 ACAA1P09110 424 aaPredicted RBP12.26□□□□□ -0.45
SHCBP1-201ENST00000303383 RCC1P18754 421 aaPredicted RBP12.26□□□□□ -0.45
SHCBP1-201ENST00000303383 BSPH1Q075Z2 132 aa12.26□□□□□ -0.45
SHCBP1-201ENST00000303383 ZNF660Q6AZW8 331 aaPredicted RBP12.26□□□□□ -0.45
SHCBP1-201ENST00000303383 OR8H1Q8NGG4 311 aa12.26□□□□□ -0.45
SHCBP1-201ENST00000303383 RTN4IP1Q8WWV3 396 aaPredicted RBP12.26□□□□□ -0.45
SHCBP1-201ENST00000303383 MOB3AQ96BX8 217 aa12.26□□□□□ -0.45
SHCBP1-201ENST00000303383 RFPL4AA6NLU0 287 aa12.26□□□□□ -0.45
SHCBP1-201ENST00000303383 RFPL4AL1F8VTS6 287 aa12.26□□□□□ -0.45
SHCBP1-201ENST00000303383 SNAPC5O75971 98 aa12.26□□□□□ -0.45
SHCBP1-201ENST00000303383 SERPINF1P36955 418 aa12.26□□□□□ -0.45
SHCBP1-201ENST00000303383 CD200P41217 278 aa12.26□□□□□ -0.45
SHCBP1-201ENST00000303383 ASCL1P50553 236 aa12.26□□□□□ -0.45
SHCBP1-201ENST00000303383 HLA-DRB3P79483 266 aa12.26□□□□□ -0.45
SHCBP1-201ENST00000303383 Q6ZS49 121 aa12.26□□□□□ -0.45
SHCBP1-201ENST00000303383 MOGAT3Q86VF5 341 aa12.26□□□□□ -0.45
SHCBP1-201ENST00000303383 C11orf53Q8IXP5 236 aa12.26□□□□□ -0.45
SHCBP1-201ENST00000303383 SPENQ96T58 3664 aaKnown RBP12.26□□□□□ -0.45
SHCBP1-201ENST00000303383 HOXB5P09067 269 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 S100GP29377 79 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 TNFAIP6P98066 277 aaPredicted RBP12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 CYCSP99999 105 aaKnown RBP12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 LY6G6FQ5SQ64 297 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 MRPL24Q96A35 216 aaKnown RBP12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 PIK3IP1Q96FE7 263 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 LIME1Q9H400 295 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 RASL12Q9NYN1 266 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 DIDO1Q9BTC0 2240 aaKnown RBP12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 TRAV39A0A0B4J263 110 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 IFNA21P01568 189 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 GABRA2P47869 451 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 ADAM5Q6NVV9 412 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 OR4A4PQ8NGN8 299 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 THAP6Q8TBB0 222 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 ITLN1Q8WWA0 313 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 MEGF10Q96KG7 1140 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 TLNRD1Q9H1K6 362 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 ESRP2Q9H6T0 727 aaKnown RBP12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 TREM2Q9NZC2 230 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 NDRG3Q9UGV2 375 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 IGLV3-9A0A075B6K5 115 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 DPRXA6NFQ7 191 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 LGALSLQ3ZCW2 172 aaPredicted RBP12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 Q6ZPA2 131 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 NUP37Q8NFH4 326 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 PLPPR1Q8TBJ4 325 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 WFIKKN1Q96NZ8 548 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 SLC5A7Q9GZV3 580 aa12.25□□□□□ -0.45
SHCBP1-201ENST00000303383 TMEM30CPA0ZSE6 113 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 M0R233 179 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 CHRNB4P30926 498 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 SUPT4H1P63272 117 aaKnown RBP12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 C20orf204Q6ZNR8 217 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 C5orf24Q7Z6I8 188 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 KIRREL1Q96J84 757 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 DNTTIP1Q9H147 329 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 HES4Q9HCC6 221 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 RAB18Q9NP72 206 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 SLC2A9Q9NRM0 540 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 PCDHB10Q9UN67 800 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 A0A0B4J2A0 478 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 AP2S1P53680 142 aaPredicted RBP12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 ANKRD55Q3KP44 614 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 PPP1R1CQ8WVI7 109 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 VRK1Q99986 396 aaPredicted RBP12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 GSKIPQ9P0R6 139 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 SHPKQ9UHJ6 478 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 TRBV6-6A0A0A6YYG2 114 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 CRYM-AS1A6NIL9 109 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 RGS13O14921 159 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 ATXN7O15265 892 aaPredicted RBP12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 ADAP1O75689 374 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 IRF2P14316 349 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 UCP3P55916 312 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 POLR2GP62487 172 aaKnown RBP eCLIP12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 PPP1R35Q8TAP8 253 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 NAA60Q9H7X0 242 aa12.24□□□□□ -0.45
SHCBP1-201ENST00000303383 KIAA2026Q5HYC2 2103 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms