RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 VSIG10L2P0DP72 767 aa13.53□□□□□ -0.24
FNDC1-201ENST00000297267 AUP1Q9Y679 476 aa13.53□□□□□ -0.24
FNDC1-201ENST00000297267 IGKV1-8A0A0C4DH67 115 aa13.53□□□□□ -0.24
FNDC1-201ENST00000297267 OR5B21A6NL26 309 aa13.53□□□□□ -0.24
FNDC1-201ENST00000297267 H7C2G1 150 aa13.53□□□□□ -0.24
FNDC1-201ENST00000297267 ORM1P02763 201 aa13.53□□□□□ -0.24
FNDC1-201ENST00000297267 SKP2Q13309 424 aa13.53□□□□□ -0.24
FNDC1-201ENST00000297267 OR4F17Q8NGA8 305 aa13.53□□□□□ -0.24
FNDC1-201ENST00000297267 RARRES2Q99969 163 aa13.53□□□□□ -0.24
FNDC1-201ENST00000297267 PCGF1Q9BSM1 259 aa13.53□□□□□ -0.24
FNDC1-201ENST00000297267 CXXC4Q9H2H0 198 aa13.53□□□□□ -0.24
FNDC1-201ENST00000297267 LPAR3Q9UBY5 353 aa13.53□□□□□ -0.24
FNDC1-201ENST00000297267 LY75O60449 1722 aa13.52□□□□□ -0.24
FNDC1-201ENST00000297267 TRDCB7Z8K6 153 aa13.52□□□□□ -0.24
FNDC1-201ENST00000297267 ATXN7O15265 892 aaPredicted RBP13.52□□□□□ -0.24
FNDC1-201ENST00000297267 C1QL1O75973 258 aa13.52□□□□□ -0.24
FNDC1-201ENST00000297267 CYC1P08574 325 aa13.52□□□□□ -0.24
FNDC1-201ENST00000297267 FKBP2P26885 142 aaKnown RBP13.52□□□□□ -0.24
FNDC1-201ENST00000297267 C21orf58P58505 322 aa13.52□□□□□ -0.24
FNDC1-201ENST00000297267 ZNF141Q15928 474 aa13.52□□□□□ -0.24
FNDC1-201ENST00000297267 VN1R17PQ8TDU5 208 aa13.52□□□□□ -0.24
FNDC1-201ENST00000297267 TOX3O15405 576 aaPredicted RBP13.52□□□□□ -0.24
FNDC1-201ENST00000297267 TMEM50BP56557 158 aa13.52□□□□□ -0.24
FNDC1-201ENST00000297267 WDR25Q64LD2 544 aaPredicted RBP13.52□□□□□ -0.24
FNDC1-201ENST00000297267 APCDD1LQ8NCL9 501 aa13.52□□□□□ -0.24
FNDC1-201ENST00000297267 M1APQ8TC57 530 aa13.52□□□□□ -0.24
FNDC1-201ENST00000297267 OR2J1Q9GZK6 312 aa13.52□□□□□ -0.24
FNDC1-201ENST00000297267 TCFL5Q9UL49 500 aa13.52□□□□□ -0.24
FNDC1-201ENST00000297267 UPK3AO75631 287 aa13.52□□□□□ -0.25
FNDC1-201ENST00000297267 IGHV3-23P01764 117 aa13.52□□□□□ -0.25
FNDC1-201ENST00000297267 SPP1P10451 314 aa13.52□□□□□ -0.25
FNDC1-201ENST00000297267 SULT1A1P50225 295 aa13.52□□□□□ -0.25
FNDC1-201ENST00000297267 NXPH1P58417 271 aa13.52□□□□□ -0.25
FNDC1-201ENST00000297267 UBE2L3P68036 154 aaKnown RBP13.52□□□□□ -0.25
FNDC1-201ENST00000297267 EDARADDQ8WWZ3 215 aa13.52□□□□□ -0.25
FNDC1-201ENST00000297267 IL36RNQ9UBH0 155 aa13.52□□□□□ -0.25
FNDC1-201ENST00000297267 INHBBP09529 407 aa13.52□□□□□ -0.25
FNDC1-201ENST00000297267 SNAI3Q3KNW1 292 aa13.52□□□□□ -0.25
FNDC1-201ENST00000297267 RSG1Q9BU20 258 aa13.52□□□□□ -0.25
FNDC1-201ENST00000297267 MYOZ1Q9NP98 299 aaPredicted RBP13.52□□□□□ -0.25
FNDC1-201ENST00000297267 TRBV23-1A0A0A0MS06 115 aa13.52□□□□□ -0.25
FNDC1-201ENST00000297267 SRSF10O75494 262 aaKnown RBP13.52□□□□□ -0.25
FNDC1-201ENST00000297267 CRYBA1P05813 215 aa13.52□□□□□ -0.25
FNDC1-201ENST00000297267 C16orf82Q7Z2V1 217 aa13.52□□□□□ -0.25
FNDC1-201ENST00000297267 PDCD6O75340 191 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 KIR3DL2P43630 455 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 DPPA3Q6W0C5 159 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 ADAM11O75078 769 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 ZNF770Q6IQ21 691 aaPredicted RBP13.51□□□□□ -0.25
FNDC1-201ENST00000297267 LIAT1Q6ZQX7 453 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 MARVELD1Q9BSK0 173 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 SH3BGRL3Q9H299 93 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 COL11A2P13942 1736 aaPredicted RBP13.51□□□□□ -0.25
FNDC1-201ENST00000297267 IGKV3D-11A0A0A0MRZ8 115 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 IGKV3-11P04433 115 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 EWSR1Q01844 656 aaKnown RBP eCLIP13.51□□□□□ -0.25
FNDC1-201ENST00000297267 TMEM97Q5BJF2 176 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 ZFP64Q9NPA5 681 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 TUBGCP6Q96RT7 1819 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 NGFRP08138 427 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 TGIF1Q15583 401 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 PRSS54Q6PEW0 395 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 TMEM65Q6PI78 240 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 OR2H1Q9GZK4 316 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 PRSS50Q9UI38 385 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 IGHV3OR16-12A0A075B7B8 117 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 NPY1RP25929 384 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 SRP14P37108 136 aaKnown RBP13.51□□□□□ -0.25
FNDC1-201ENST00000297267 TMEM208Q9BTX3 173 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 TMEM74BQ9NUR3 256 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 MYOFQ9NZM1 2061 aa13.51□□□□□ -0.25
FNDC1-201ENST00000297267 ZNF721Q8TF20 911 aa13.5□□□□□ -0.25
FNDC1-201ENST00000297267 S4R3C0 116 aa13.5□□□□□ -0.25
FNDC1-201ENST00000297267 SBF2Q86WG5 1849 aa13.5□□□□□ -0.25
FNDC1-201ENST00000297267 EPOPA6NHQ4 379 aa13.5□□□□□ -0.25
FNDC1-201ENST00000297267 FAM157CP0CG43 387 aa13.5□□□□□ -0.25
FNDC1-201ENST00000297267 EPHA8P29322 1005 aaPredicted RBP13.5□□□□□ -0.25
FNDC1-201ENST00000297267 KLF9Q13886 244 aaPredicted RBP13.5□□□□□ -0.25
FNDC1-201ENST00000297267 SPSB1Q96BD6 273 aa13.5□□□□□ -0.25
FNDC1-201ENST00000297267 WDFY2Q96P53 400 aa13.5□□□□□ -0.25
FNDC1-201ENST00000297267 FGF9P31371 208 aaPredicted RBP13.5□□□□□ -0.25
FNDC1-201ENST00000297267 CCL8P80075 99 aa13.5□□□□□ -0.25
FNDC1-201ENST00000297267 SSX8Q7RTT4 187 aa13.5□□□□□ -0.25
FNDC1-201ENST00000297267 BGLAPP02818 100 aa13.5□□□□□ -0.25
FNDC1-201ENST00000297267 SCTP09683 121 aa13.5□□□□□ -0.25
FNDC1-201ENST00000297267 RNPS1Q15287 305 aaKnown RBP13.5□□□□□ -0.25
FNDC1-201ENST00000297267 OR13G1Q8NGZ3 307 aa13.5□□□□□ -0.25
FNDC1-201ENST00000297267 SH2D7A6NKC9 451 aaPredicted RBP13.5□□□□□ -0.25
FNDC1-201ENST00000297267 CDX4O14627 284 aaPredicted RBP13.5□□□□□ -0.25
FNDC1-201ENST00000297267 ACAA1P09110 424 aaPredicted RBP13.5□□□□□ -0.25
FNDC1-201ENST00000297267 SLC6A1P30531 599 aa13.5□□□□□ -0.25
FNDC1-201ENST00000297267 FAM222BQ8WU58 562 aa13.5□□□□□ -0.25
FNDC1-201ENST00000297267 ST6GALNAC2Q9UJ37 374 aa13.5□□□□□ -0.25
FNDC1-201ENST00000297267 TMED3Q9Y3Q3 217 aa13.5□□□□□ -0.25
FNDC1-201ENST00000297267 SCN8AQ9UQD0 1980 aa13.5□□□□□ -0.25
FNDC1-201ENST00000297267 IRF3Q14653 427 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 PRDM6Q9NQX0 595 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 AP5S1Q9NUS5 200 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 FGF2P09038 288 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 NAAAQ02083 359 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms