RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 POLR2GP62487 172 aaKnown RBP eCLIP15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 SWI5Q1ZZU3 235 aa15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 HSD17B11Q8NBQ5 300 aa15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 IL1F10Q8WWZ1 152 aa15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 NRIP2Q9BQI9 281 aa15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 OR2J1Q9GZK6 312 aa15.64■□□□□ 0.09
SHKBP1-201ENST00000291842 DMXL1Q9Y485 3027 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 KIR2DS1A0A191URI9 304 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 FAM24AA6NFZ4 105 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 C9JQL5 133 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 RNASEK-C17orf49H0YIS7 233 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 ADAM20O43506 726 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 C1QL1O75973 258 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 KIR2DS4P43632 304 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 KIR2DS1Q14954 304 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 ALKBH6Q3KRA9 238 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 SELENOHQ8IZQ5 122 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 PRR18Q8N4B5 295 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 TMEM178AQ8NBL3 297 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 UBALD1Q8TB05 177 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 NANOS1Q8WY41 292 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 OR51I2Q9H344 312 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 OPA3Q9H6K4 179 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 POMT1Q9Y6A1 747 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 SELEP16581 610 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 P2RY1P47900 373 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 NPBWR1P48145 328 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 IL13RA2Q14627 380 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 GNMTQ14749 295 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 CXorf66Q5JRM2 361 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 PCSK4Q6UW60 755 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 FAM185AQ8N0U4 392 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 LILRB1Q8NHL6 650 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 ZDHHC11Q9H8X9 412 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 DLL3Q9NYJ7 618 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 RFNGQ9Y644 331 aa15.63■□□□□ 0.09
SHKBP1-201ENST00000291842 OR5B21A6NL26 309 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 TUSC2O75896 110 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 OMGP23515 440 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 TNFSF10P50591 281 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 SOX8P57073 446 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 ZNF616Q08AN1 781 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 IL24Q13007 206 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 TBC1D28Q2M2D7 210 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 C10orf91Q5T1B1 145 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 GPR157Q5UAW9 335 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 WDR86Q86TI4 376 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 CLRN3Q8NCR9 226 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 KIRREL1Q96J84 757 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 GP6Q9HCN6 339 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 PARP11Q9NR21 331 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 BOD1L1Q8NFC6 3051 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 BORCS7-ASMTA0A0B4J1R7 106 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 DEGS1O15121 323 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 SSSCA1O60232 199 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 SFTA3P0C7M3 94 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 CLINT1Q14677 625 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 TMEM56Q96MV1 263 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 PLK3Q9H4B4 646 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 CARHSP1Q9Y2V2 147 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 TMEM56-RWDD3S4R434 201 aa15.62■□□□□ 0.09
SHKBP1-201ENST00000291842 PRSS44E7EML9 344 aa15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 SIRPB1O00241 398 aa15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 ZNF14P17017 642 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 IGHV1-2P23083 117 aa15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 NKX2-1P43699 371 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 F2RL1P55085 397 aa15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 SRSF7Q16629 238 aaKnown RBP eCLIP15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 FDCSPQ8NFU4 85 aa15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 TRIB1Q96RU8 372 aa15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 SEC11CQ9BY50 192 aa15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 PRR14LQ5THK1 2151 aa15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 SPAARA0A1B0GVQ0 90 aa15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 SRPXP78539 464 aa15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 EWSR1Q01844 656 aaKnown RBP eCLIP15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 BOD1Q96IK1 185 aa15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 ARV1Q9H2C2 271 aa15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 SPACA1Q9HBV2 294 aa15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 FAM212BQ9NTI7 297 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 ZFP57Q9NU63 452 aa15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 OR1A1Q9P1Q5 309 aa15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 ERRFI1Q9UJM3 462 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 PURGQ9UJV8 347 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-201ENST00000291842 A0A1B0GV50 99 aa15.6■□□□□ 0.09
SHKBP1-201ENST00000291842 CDS2O95674 445 aa15.6■□□□□ 0.09
SHKBP1-201ENST00000291842 NFYBP25208 207 aa15.6■□□□□ 0.09
SHKBP1-201ENST00000291842 UBE2NP61088 152 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-201ENST00000291842 PPP1CBP62140 327 aa15.6■□□□□ 0.09
SHKBP1-201ENST00000291842 MIDNQ504T8 468 aa15.6■□□□□ 0.09
SHKBP1-201ENST00000291842 OR2C3Q8N628 320 aa15.6■□□□□ 0.09
SHKBP1-201ENST00000291842 SCCPDHQ8NBX0 429 aa15.6■□□□□ 0.09
SHKBP1-201ENST00000291842 DEFB124Q8NES8 71 aa15.6■□□□□ 0.09
SHKBP1-201ENST00000291842 OR51H1Q8NH63 302 aa15.6■□□□□ 0.09
SHKBP1-201ENST00000291842 OR10J5Q8NHC4 309 aa15.6■□□□□ 0.09
SHKBP1-201ENST00000291842 IGSF23A1L1A6 192 aa15.6■□□□□ 0.09
SHKBP1-201ENST00000291842 SMPD2O60906 423 aa15.6■□□□□ 0.09
SHKBP1-201ENST00000291842 PGLYRP1O75594 196 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-201ENST00000291842 RND3P61587 244 aa15.6■□□□□ 0.09
SHKBP1-201ENST00000291842 HOXA4Q00056 320 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-201ENST00000291842 CMTM1Q8IZ96 169 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms