RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 ATXN7O15265 892 aaPredicted RBP13.72□□□□□ -0.21
SMAD6-201ENST00000288840 ATP6V0CP27449 155 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 NAAAQ02083 359 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 TPRX1Q8N7U7 411 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 S100PBPQ96BU1 408 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 NIPSNAP3BQ9BS92 247 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 RCC2Q9P258 522 aaKnown RBP13.72□□□□□ -0.21
SMAD6-201ENST00000288840 CACNG5Q9UF02 275 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 TMED3Q9Y3Q3 217 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 MED13Q9UHV7 2174 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 IGHV3-43A0A0B4J1X8 118 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 CDIPTO14735 213 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 IGHEP01854 428 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 IGHV3-43DP0DP04 118 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 ADCYAP1P18509 176 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 NTF4P34130 210 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 PMP22Q01453 160 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 PPP1R32Q7Z5V6 425 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 NABP1Q96AH0 204 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 HEATR1Q9H583 2144 aaKnown RBP13.72□□□□□ -0.21
SMAD6-201ENST00000288840 SULT1A2P50226 295 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 ZNF239Q16600 458 aaKnown RBP13.72□□□□□ -0.21
SMAD6-201ENST00000288840 HIST2H3AQ71DI3 136 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 NANOS1Q8WY41 292 aaKnown RBP13.72□□□□□ -0.21
SMAD6-201ENST00000288840 TMEM54Q969K7 222 aa13.72□□□□□ -0.21
SMAD6-201ENST00000288840 SF3B5Q9BWJ5 86 aaKnown RBP13.72□□□□□ -0.21
SMAD6-201ENST00000288840 ZNF552Q9H707 407 aaPredicted RBP13.72□□□□□ -0.21
SMAD6-201ENST00000288840 F8VVB4 439 aa13.71□□□□□ -0.21
SMAD6-201ENST00000288840 F8VWA3 439 aa13.71□□□□□ -0.21
SMAD6-201ENST00000288840 SYNGR3O43761 229 aa13.71□□□□□ -0.21
SMAD6-201ENST00000288840 SSPNQ14714 243 aa13.71□□□□□ -0.21
SMAD6-201ENST00000288840 SLC25A53Q5H9E4 307 aa13.71□□□□□ -0.21
SMAD6-201ENST00000288840 C10orf128Q5T292 105 aa13.71□□□□□ -0.21
SMAD6-201ENST00000288840 TIPARPQ7Z3E1 657 aaKnown RBP13.71□□□□□ -0.21
SMAD6-201ENST00000288840 FAM173AQ9BQD7 235 aa13.71□□□□□ -0.21
SMAD6-201ENST00000288840 IL17BQ9UHF5 180 aa13.71□□□□□ -0.21
SMAD6-201ENST00000288840 FAM58AQ8N1B3 248 aa13.71□□□□□ -0.21
SMAD6-201ENST00000288840 LINC00469Q8N7U9 141 aa13.71□□□□□ -0.21
SMAD6-201ENST00000288840 PRSS50Q9UI38 385 aa13.71□□□□□ -0.21
SMAD6-201ENST00000288840 SH3BGRL2Q9UJC5 107 aa13.71□□□□□ -0.21
SMAD6-201ENST00000288840 V9GYS6 101 aa13.71□□□□□ -0.21
SMAD6-201ENST00000288840 ZNF98A6NK75 572 aa13.71□□□□□ -0.22
SMAD6-201ENST00000288840 IFNA17P01571 189 aa13.71□□□□□ -0.22
SMAD6-201ENST00000288840 MDKP21741 143 aaPredicted RBP13.71□□□□□ -0.22
SMAD6-201ENST00000288840 SRPXP78539 464 aa13.71□□□□□ -0.22
SMAD6-201ENST00000288840 TGFBR3Q03167 851 aa13.71□□□□□ -0.22
SMAD6-201ENST00000288840 FIP1L1Q6UN15 594 aaKnown RBP13.71□□□□□ -0.22
SMAD6-201ENST00000288840 OR10V1Q8NGI7 309 aa13.71□□□□□ -0.22
SMAD6-201ENST00000288840 TCTEX1D2Q8WW35 142 aa13.71□□□□□ -0.22
SMAD6-201ENST00000288840 PLEKHF2Q9H8W4 249 aa13.71□□□□□ -0.22
SMAD6-201ENST00000288840 FRYLO94915 3013 aa13.71□□□□□ -0.22
SMAD6-201ENST00000288840 ALDH3B1P43353 468 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 CEBPDP49716 269 aaPredicted RBP13.7□□□□□ -0.22
SMAD6-201ENST00000288840 MEOX1P50221 254 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 MPV17LQ2QL34 196 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 OR2M7Q8NG81 312 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 CLDN23Q96B33 292 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 AKAP6Q13023 2319 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 KLRC4-KLRK1H3BQV0 150 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 YKT6O15498 198 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 TIMM8AO60220 97 aaPredicted RBP13.7□□□□□ -0.22
SMAD6-201ENST00000288840 RSPO1Q2MKA7 263 aaPredicted RBP13.7□□□□□ -0.22
SMAD6-201ENST00000288840 TRIB1Q96RU8 372 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 LIME1Q9H400 295 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 ZNF318Q5VUA4 2279 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 TRAV20A0A0B4J274 112 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 PSG2P11465 335 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 HLA-GP17693 338 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 TMEM187Q14656 261 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 ADIRFQ15847 76 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 ZNF818PQ6ZRF7 136 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 FAM89BQ8N5H3 189 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 LILRB1Q8NHL6 650 aaPredicted RBP13.7□□□□□ -0.22
SMAD6-201ENST00000288840 RPUSD4Q96CM3 377 aaKnown RBP13.7□□□□□ -0.22
SMAD6-201ENST00000288840 HS3ST6Q96QI5 342 aa13.7□□□□□ -0.22
SMAD6-201ENST00000288840 DTYMKP23919 212 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 PTAFRP25105 342 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 CEACAM6P40199 344 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 TLE4Q04727 773 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 HIST2H3PS2Q5TEC6 136 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 ZNF573Q86YE8 665 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 UBALD2Q8IYN6 164 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 OR1J1Q8NGS3 322 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 SLC35B3Q9H1N7 401 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 SLC39A9Q9NUM3 307 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 PSENENQ9NZ42 101 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 PCNX2A6NKB5 2137 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 NUDT19A8MXV4 375 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 EDDM3BP56851 147 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 RSG1Q9BU20 258 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 UNKLQ9H9P5 680 aaKnown RBP13.69□□□□□ -0.22
SMAD6-201ENST00000288840 C9JQL5 133 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 GNG3P63215 75 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 H3F3AP84243 136 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 ZNF385CQ66K41 422 aaPredicted RBP13.69□□□□□ -0.22
SMAD6-201ENST00000288840 LHFPL1Q86WI0 220 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 GNG12Q9UBI6 72 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 TINAGQ9UJW2 476 aa13.69□□□□□ -0.22
SMAD6-201ENST00000288840 SLC22A20A6NK97 555 aa13.68□□□□□ -0.22
SMAD6-201ENST00000288840 OR8G1Q15617 311 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms