RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 ZNF705BP0CI00 300 aaPredicted RBP11.61□□□□□ -0.55
SCAF4-201ENST00000286835 NPBWR2P48146 333 aa11.61□□□□□ -0.55
SCAF4-201ENST00000286835 ERVS71-1P61550 626 aa11.61□□□□□ -0.55
SCAF4-201ENST00000286835 EXT1Q16394 746 aa11.61□□□□□ -0.55
SCAF4-201ENST00000286835 BATFQ16520 125 aa11.61□□□□□ -0.55
SCAF4-201ENST00000286835 ADPRHL1Q8NDY3 354 aa11.61□□□□□ -0.55
SCAF4-201ENST00000286835 OR1K1Q8NGR3 316 aa11.61□□□□□ -0.55
SCAF4-201ENST00000286835 NTNG2Q96CW9 530 aa11.61□□□□□ -0.55
SCAF4-201ENST00000286835 CALHM2Q9HA72 323 aa11.61□□□□□ -0.55
SCAF4-201ENST00000286835 SCTP09683 121 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 WDR25Q64LD2 544 aaPredicted RBP11.6□□□□□ -0.55
SCAF4-201ENST00000286835 LRP11Q86VZ4 500 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 PACRGQ96M98 296 aaPredicted RBP11.6□□□□□ -0.55
SCAF4-201ENST00000286835 WASF3Q9UPY6 502 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 GDF9O60383 454 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 SCGB1D1O95968 90 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 PGA5P0DJD9 388 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 CDX1P47902 265 aaPredicted RBP11.6□□□□□ -0.55
SCAF4-201ENST00000286835 CFHR1Q03591 330 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 PLP2Q04941 152 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 FAM131CQ96AQ9 280 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 FBLN5Q9UBX5 448 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 ERRFI1Q9UJM3 462 aaPredicted RBP11.6□□□□□ -0.55
SCAF4-201ENST00000286835 TUBD1Q9UJT1 453 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 BOKQ9UMX3 212 aaPredicted RBP11.6□□□□□ -0.55
SCAF4-201ENST00000286835 ZNF816-ZNF321PA0A0X1KG74 233 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 C5orf49A4QMS7 147 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 CLDN34H7C241 214 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 DFFBO76075 338 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 VAMP5O95183 116 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 OR56B2PQ8NGI1 322 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 DNASE2BQ8WZ79 361 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 GINS3Q9BRX5 216 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 LIME1Q9H400 295 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 BTBD17A6NE02 478 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 GJE1A6NN92 205 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 H7BYZ3 331 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 CXCL1P09341 107 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 FUT6P51993 359 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 PYY3Q5JQD4 70 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 FAM89BQ8N5H3 189 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 OR10J5Q8NHC4 309 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 BOD1Q96IK1 185 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 FOXB1Q99853 325 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 PRUNE2Q8WUY3 3088 aa11.6□□□□□ -0.55
SCAF4-201ENST00000286835 A0A1W2PNV4 684 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 PPP5D1E7EU14 171 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 MRPL33O75394 65 aaKnown RBP11.59□□□□□ -0.55
SCAF4-201ENST00000286835 FOLR2P14207 255 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 ZNF92Q03936 586 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 ZNF66Q6ZN08 573 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 CA5BP1Q8WTZ4 195 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 TRAPPC2LQ9UL33 140 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 OR5H1A6NKK0 313 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 TRDCB7Z8K6 153 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 SOX15O60248 233 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 TRGC1P0CF51 173 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 CST9LP1Q5W188 147 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 WDR74Q6RFH5 385 aaPredicted RBP11.59□□□□□ -0.55
SCAF4-201ENST00000286835 OPA3Q9H6K4 179 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 AURKAIP1Q9NWT8 199 aaPredicted RBP11.59□□□□□ -0.55
SCAF4-201ENST00000286835 PSENENQ9NZ42 101 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 KIAA1456Q9P272 454 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 RNF150Q9ULK6 438 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 THADAQ6YHU6 1953 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 A0A0U1RQV5 110 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 UBE2L5PA0A1B0GUS4 154 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 ZNF732B4DXR9 585 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 MT-CO3P00414 261 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 ENDOGQ14249 297 aaKnown RBP11.59□□□□□ -0.55
SCAF4-201ENST00000286835 IL11RAQ14626 422 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 WIPI1Q5MNZ9 446 aaPredicted RBP11.59□□□□□ -0.55
SCAF4-201ENST00000286835 CACNG5Q9UF02 275 aa11.59□□□□□ -0.55
SCAF4-201ENST00000286835 CHD9Q3L8U1 2897 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 DOCK11Q5JSL3 2073 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 MMP7P09237 267 aaPredicted RBP11.58□□□□□ -0.56
SCAF4-201ENST00000286835 DTYMKP23919 212 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 G0S2P27469 103 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 RAB35Q15286 201 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 CDPF1Q6NVV7 123 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 MYPOPQ86VE0 399 aaPredicted RBP11.58□□□□□ -0.56
SCAF4-201ENST00000286835 CNEP1R1Q8N9A8 125 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 OR4F5Q8NH21 305 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 ZNF488Q96MN9 340 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 OR4F4Q96R69 305 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 ZDHHC8Q9ULC8 765 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 A0A0J9YW62 118 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 CD46P15529 392 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 LTC4SQ16873 150 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 NCR3LG1Q68D85 454 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 LYPD6Q86Y78 171 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 FER1L6-AS2Q96M78 137 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 DMRT1Q9Y5R6 373 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 BCL3P20749 454 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 HNF1AP20823 631 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 HBG1P69891 147 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 HBG2P69892 147 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 ZNF441Q8N8Z8 693 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 GUCD1Q96NT3 240 aa11.58□□□□□ -0.56
SCAF4-201ENST00000286835 RNF122Q9H9V4 155 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms