RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 TMEM108Q6UXF1 575 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 ZNF546Q86UE3 836 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 LRP11Q86VZ4 500 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 SGPP2Q8IWX5 399 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 Q8IYB0 196 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 C1orf174Q8IYL3 243 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 POC1AQ8NBT0 407 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 OR11L1Q8NGX0 322 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 PLPPR1Q8TBJ4 325 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 PIK3IP1Q96FE7 263 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 OR10C1Q96KK4 312 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 ARL6Q9H0F7 186 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 TRBV6-6A0A0A6YYG2 114 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 SLC33A1O00400 549 aaPredicted RBP17.69■□□□□ 0.42
YBX3-202ENST00000279550 WNT9BO14905 357 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 PPYP01298 95 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 C4BPBP20851 252 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 RBMXP38159 391 aaKnown RBP17.69■□□□□ 0.42
YBX3-202ENST00000279550 UCP3P55916 312 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 HERV-K104P61576 105 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 TFF3Q07654 80 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 ZNF880Q6PDB4 577 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 TNFSF18Q9UNG2 199 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 BET1O15155 118 aa17.68■□□□□ 0.42
YBX3-202ENST00000279550 SNAPC5O75971 98 aa17.68■□□□□ 0.42
YBX3-202ENST00000279550 HOXB5P09067 269 aa17.68■□□□□ 0.42
YBX3-202ENST00000279550 AGAP20933 346 aa17.68■□□□□ 0.42
YBX3-202ENST00000279550 PTAFRP25105 342 aa17.68■□□□□ 0.42
YBX3-202ENST00000279550 AP2S1P53680 142 aaPredicted RBP17.68■□□□□ 0.42
YBX3-202ENST00000279550 PAN3Q58A45 887 aaKnown RBP17.68■□□□□ 0.42
YBX3-202ENST00000279550 ITLN2Q8WWU7 325 aaPredicted RBP17.68■□□□□ 0.42
YBX3-202ENST00000279550 RSRP1Q9BUV0 290 aa17.68■□□□□ 0.42
YBX3-202ENST00000279550 NMES1Q9C002 83 aa17.68■□□□□ 0.42
YBX3-202ENST00000279550 TLNRD1Q9H1K6 362 aa17.68■□□□□ 0.42
YBX3-202ENST00000279550 NAA60Q9H7X0 242 aa17.68■□□□□ 0.42
YBX3-202ENST00000279550 HES4Q9HCC6 221 aa17.68■□□□□ 0.42
YBX3-202ENST00000279550 MBD2Q9UBB5 411 aa17.68■□□□□ 0.42
YBX3-202ENST00000279550 NDRG3Q9UGV2 375 aa17.68■□□□□ 0.42
YBX3-202ENST00000279550 ATP23Q9Y6H3 246 aa17.68■□□□□ 0.42
YBX3-202ENST00000279550 ZFYVE26Q68DK2 2539 aa17.68■□□□□ 0.42
YBX3-202ENST00000279550 TRAV39A0A0B4J263 110 aa17.67■□□□□ 0.42
YBX3-202ENST00000279550 A0A1B0GWJ7 208 aa17.67■□□□□ 0.42
YBX3-202ENST00000279550 RCC1P18754 421 aaPredicted RBP17.67■□□□□ 0.42
YBX3-202ENST00000279550 CEBPDP49716 269 aaPredicted RBP17.67■□□□□ 0.42
YBX3-202ENST00000279550 SNTB1Q13884 538 aaKnown RBP17.67■□□□□ 0.42
YBX3-202ENST00000279550 RBM39Q14498 530 aaKnown RBP17.67■□□□□ 0.42
YBX3-202ENST00000279550 ABCA11PQ4W5N1 156 aa17.67■□□□□ 0.42
YBX3-202ENST00000279550 RGS7BPQ6MZT1 257 aaPredicted RBP17.67■□□□□ 0.42
YBX3-202ENST00000279550 OR5T2Q8NGG2 359 aa17.67■□□□□ 0.42
YBX3-202ENST00000279550 RIMS4Q9H426 269 aaPredicted RBP17.67■□□□□ 0.42
YBX3-202ENST00000279550 NGBQ9NPG2 151 aa17.67■□□□□ 0.42
YBX3-202ENST00000279550 SPEF1Q9Y4P9 236 aa17.67■□□□□ 0.42
YBX3-202ENST00000279550 DIDO1Q9BTC0 2240 aaKnown RBP17.67■□□□□ 0.42
YBX3-202ENST00000279550 HIVEP3Q5T1R4 2406 aa17.67■□□□□ 0.42
YBX3-202ENST00000279550 RNF222A6NCQ9 220 aa17.67■□□□□ 0.42
YBX3-202ENST00000279550 IFNA7P01567 189 aa17.67■□□□□ 0.42
YBX3-202ENST00000279550 ACAA1P09110 424 aaPredicted RBP17.67■□□□□ 0.42
YBX3-202ENST00000279550 ZNF146Q15072 292 aa17.67■□□□□ 0.42
YBX3-202ENST00000279550 SP6Q3SY56 376 aa17.67■□□□□ 0.42
YBX3-202ENST00000279550 FAM219AQ8IW50 185 aa17.67■□□□□ 0.42
YBX3-202ENST00000279550 SLC38A6Q8IZM9 456 aa17.67■□□□□ 0.42
YBX3-202ENST00000279550 PCNPQ8WW12 178 aaKnown RBP17.67■□□□□ 0.42
YBX3-202ENST00000279550 RTN4IP1Q8WWV3 396 aaPredicted RBP17.67■□□□□ 0.42
YBX3-202ENST00000279550 METTL8Q9H825 291 aaKnown RBP17.67■□□□□ 0.42
YBX3-202ENST00000279550 TMEM165Q9HC07 324 aa17.67■□□□□ 0.42
YBX3-202ENST00000279550 SLC2A9Q9NRM0 540 aa17.67■□□□□ 0.42
YBX3-202ENST00000279550 UFSP2Q9NUQ7 469 aa17.67■□□□□ 0.42
YBX3-202ENST00000279550 RASL12Q9NYN1 266 aa17.67■□□□□ 0.42
YBX3-202ENST00000279550 KIR2DS1A0A191URI9 304 aa17.66■□□□□ 0.42
YBX3-202ENST00000279550 ATP6V1G2-DDX39BF2Z307 99 aa17.66■□□□□ 0.42
YBX3-202ENST00000279550 H0YIZ8 118 aa17.66■□□□□ 0.42
YBX3-202ENST00000279550 TUSC2O75896 110 aa17.66■□□□□ 0.42
YBX3-202ENST00000279550 PSMB6P28072 239 aa17.66■□□□□ 0.42
YBX3-202ENST00000279550 KIR2DS4P43632 304 aa17.66■□□□□ 0.42
YBX3-202ENST00000279550 NKX6-1P78426 367 aaPredicted RBP17.66■□□□□ 0.42
YBX3-202ENST00000279550 TMEM187Q14656 261 aa17.66■□□□□ 0.42
YBX3-202ENST00000279550 KIR2DS1Q14954 304 aa17.66■□□□□ 0.42
YBX3-202ENST00000279550 WDR82Q6UXN9 313 aa17.66■□□□□ 0.42
YBX3-202ENST00000279550 OR8H3Q8N146 312 aa17.66■□□□□ 0.42
YBX3-202ENST00000279550 ZNF808Q8N4W9 903 aaPredicted RBP17.66■□□□□ 0.42
YBX3-202ENST00000279550 MRPL24Q96A35 216 aaKnown RBP17.66■□□□□ 0.42
YBX3-202ENST00000279550 RNF126Q9BV68 326 aa17.66■□□□□ 0.42
YBX3-202ENST00000279550 UBQLN2Q9UHD9 624 aa17.66■□□□□ 0.42
YBX3-202ENST00000279550 IGKV1D-13A0A0B4J2D9 117 aa17.65■□□□□ 0.42
YBX3-202ENST00000279550 RPS10-NUDT3A0A1W2PQS6 291 aa17.65■□□□□ 0.42
YBX3-202ENST00000279550 DPRXA6NFQ7 191 aa17.65■□□□□ 0.42
YBX3-202ENST00000279550 A6NLC8 198 aa17.65■□□□□ 0.42
YBX3-202ENST00000279550 KCNAB3O43448 404 aa17.65■□□□□ 0.42
YBX3-202ENST00000279550 CLDN14O95500 239 aa17.65■□□□□ 0.42
YBX3-202ENST00000279550 TFF1P04155 84 aa17.65■□□□□ 0.42
YBX3-202ENST00000279550 OR5AC1P0C628 307 aa17.65■□□□□ 0.42
YBX3-202ENST00000279550 IGKV1-13P0DP09 117 aa17.65■□□□□ 0.42
YBX3-202ENST00000279550 HLA-DRB3P79483 266 aa17.65■□□□□ 0.42
YBX3-202ENST00000279550 BSPH1Q075Z2 132 aa17.65■□□□□ 0.42
YBX3-202ENST00000279550 IL15RAQ13261 267 aa17.65■□□□□ 0.42
YBX3-202ENST00000279550 KCNRGQ8N5I3 272 aa17.65■□□□□ 0.42
YBX3-202ENST00000279550 LINC01560Q8TB33 94 aa17.65■□□□□ 0.42
YBX3-202ENST00000279550 C2orf50Q96LR7 162 aa17.65■□□□□ 0.42
YBX3-202ENST00000279550 C1orf123Q9NWV4 160 aa17.65■□□□□ 0.42
YBX3-202ENST00000279550 ABCD4O14678 606 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms