RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 FAM90A18PA6NE21 464 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 FAM90A16PA6NEW6 464 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 FAM90A20PA6NIJ5 464 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 FAM90A8PA6NJQ4 464 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 FAM90A7PA6NKC0 464 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 FAM90A22PA8MWA6 464 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 FAM90A12PA8MX19 464 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 FAM90A5PA8MXJ8 464 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 FAM90A23PA8MXZ1 464 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 TRDCB7Z8K6 153 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 BCL2L11O43521 198 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 CNOT4O95628 575 aaKnown RBP15.2■□□□□ 0.02
CAPN1-201ENST00000279247 FAM90A15PP0C7V4 464 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 FAM90A13PP0C7W8 464 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 FAM90A14PP0C7W9 464 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 FAM90A24PP0C7X0 464 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 ZNF718Q3SXZ3 478 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 TOR2AQ5JU69 321 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 C22orf34Q6ZV56 151 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 POC1AQ8NBT0 407 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 OR8G5Q8NG78 346 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 P2RY6Q15077 328 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 MSMPQ1L6U9 139 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 GLYATL2Q8WU03 294 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 SPACA1Q9HBV2 294 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 UBE2J1Q9Y385 318 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-201ENST00000279247 ATP23Q9Y6H3 246 aa15.2■□□□□ 0.02
CAPN1-201ENST00000279247 LINC00862A6NCI5 91 aa15.19■□□□□ 0.02
CAPN1-201ENST00000279247 TMEM187Q14656 261 aa15.19■□□□□ 0.02
CAPN1-201ENST00000279247 TMEM268Q5VZI3 342 aa15.19■□□□□ 0.02
CAPN1-201ENST00000279247 FAM53AQ6NSI3 398 aaPredicted RBP15.19■□□□□ 0.02
CAPN1-201ENST00000279247 SLC38A6Q8IZM9 456 aa15.19■□□□□ 0.02
CAPN1-201ENST00000279247 OR51H1Q8NH63 302 aa15.19■□□□□ 0.02
CAPN1-201ENST00000279247 NUP62P37198 522 aaPredicted RBP15.19■□□□□ 0.02
CAPN1-201ENST00000279247 TBC1D26Q86UD7 250 aa15.19■□□□□ 0.02
CAPN1-201ENST00000279247 C1orf162Q8NEQ5 155 aaPredicted RBP15.19■□□□□ 0.02
CAPN1-201ENST00000279247 ERRFI1Q9UJM3 462 aaPredicted RBP15.19■□□□□ 0.02
CAPN1-201ENST00000279247 FBXO9Q9UK97 447 aaPredicted RBP15.19■□□□□ 0.02
CAPN1-201ENST00000279247 SLC25A15Q9Y619 301 aa15.19■□□□□ 0.02
CAPN1-201ENST00000279247 KIR2DS1A0A191URI9 304 aa15.19■□□□□ 0.02
CAPN1-201ENST00000279247 C1QTNF9BB2RNN3 333 aa15.19■□□□□ 0.02
CAPN1-201ENST00000279247 C1QTNF9P0C862 333 aa15.19■□□□□ 0.02
CAPN1-201ENST00000279247 KIR2DS4P43632 304 aa15.19■□□□□ 0.02
CAPN1-201ENST00000279247 NAAAQ02083 359 aa15.19■□□□□ 0.02
CAPN1-201ENST00000279247 KIR2DS1Q14954 304 aa15.19■□□□□ 0.02
CAPN1-201ENST00000279247 Q6P435 159 aa15.19■□□□□ 0.02
CAPN1-201ENST00000279247 MUCL1Q96DR8 90 aa15.19■□□□□ 0.02
CAPN1-201ENST00000279247 PIK3IP1Q96FE7 263 aa15.19■□□□□ 0.02
CAPN1-201ENST00000279247 DECR2Q9NUI1 292 aa15.19■□□□□ 0.02
CAPN1-201ENST00000279247 TREM2Q9NZC2 230 aa15.19■□□□□ 0.02
CAPN1-201ENST00000279247 PSPNO60542 156 aa15.18■□□□□ 0.02
CAPN1-201ENST00000279247 OR10J5Q8NHC4 309 aa15.18■□□□□ 0.02
CAPN1-201ENST00000279247 ARPC5LQ9BPX5 153 aa15.18■□□□□ 0.02
CAPN1-201ENST00000279247 NRIP2Q9BQI9 281 aa15.18■□□□□ 0.02
CAPN1-201ENST00000279247 MEMO1Q9Y316 297 aa15.18■□□□□ 0.02
CAPN1-201ENST00000279247 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-201ENST00000279247 LGALS8O00214 317 aa15.18■□□□□ 0.02
CAPN1-201ENST00000279247 MPPED1O15442 326 aa15.18■□□□□ 0.02
CAPN1-201ENST00000279247 B3GALNT1O75752 331 aa15.18■□□□□ 0.02
CAPN1-201ENST00000279247 PGA5P0DJD9 388 aa15.18■□□□□ 0.02
CAPN1-201ENST00000279247 FAM76BQ5HYJ3 339 aa15.18■□□□□ 0.02
CAPN1-201ENST00000279247 RGS7BPQ6MZT1 257 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-201ENST00000279247 SLC35G3Q8N808 338 aa15.18■□□□□ 0.02
CAPN1-201ENST00000279247 OR52M1Q8NGK5 317 aa15.18■□□□□ 0.02
CAPN1-201ENST00000279247 BCL2L14Q9BZR8 327 aa15.18■□□□□ 0.02
CAPN1-201ENST00000279247 PARP12Q9H0J9 701 aaKnown RBP15.18■□□□□ 0.02
CAPN1-201ENST00000279247 USF3Q68DE3 2245 aa15.18■□□□□ 0.02
CAPN1-201ENST00000279247 C3orf85A0A1B0GTC6 90 aa15.17■□□□□ 0.02
CAPN1-201ENST00000279247 SCO1O75880 301 aa15.17■□□□□ 0.02
CAPN1-201ENST00000279247 ZNF16P17020 682 aaPredicted RBP15.17■□□□□ 0.02
CAPN1-201ENST00000279247 TBR1Q16650 682 aa15.17■□□□□ 0.02
CAPN1-201ENST00000279247 PRSS54Q6PEW0 395 aa15.17■□□□□ 0.02
CAPN1-201ENST00000279247 ATP6V1G2-DDX39BF2Z307 99 aa15.17■□□□□ 0.02
CAPN1-201ENST00000279247 SH2D1BO14796 132 aa15.17■□□□□ 0.02
CAPN1-201ENST00000279247 HAND1O96004 215 aa15.17■□□□□ 0.02
CAPN1-201ENST00000279247 AESQ08117 197 aa15.17■□□□□ 0.02
CAPN1-201ENST00000279247 IL13RA2Q14627 380 aa15.17■□□□□ 0.02
CAPN1-201ENST00000279247 CCDC71LQ8N9Z2 235 aa15.17■□□□□ 0.02
CAPN1-201ENST00000279247 KCNS2Q9ULS6 477 aa15.17■□□□□ 0.02
CAPN1-201ENST00000279247 J3QW42 95 aa15.17■□□□□ 0.02
CAPN1-201ENST00000279247 SPRY3O43610 288 aa15.17■□□□□ 0.02
CAPN1-201ENST00000279247 RRASP10301 218 aa15.17■□□□□ 0.02
CAPN1-201ENST00000279247 UBA52P62987 128 aaKnown RBP15.17■□□□□ 0.02
CAPN1-201ENST00000279247 ZNF345Q14585 488 aa15.17■□□□□ 0.02
CAPN1-201ENST00000279247 LIAT1Q6ZQX7 453 aa15.17■□□□□ 0.02
CAPN1-201ENST00000279247 COQ3Q9NZJ6 369 aa15.17■□□□□ 0.02
CAPN1-201ENST00000279247 METRNQ9UJH8 293 aa15.17■□□□□ 0.02
CAPN1-201ENST00000279247 TMA7Q9Y2S6 64 aaKnown RBP15.17■□□□□ 0.02
CAPN1-201ENST00000279247 CRYAAP02489 173 aa15.16■□□□□ 0.02
CAPN1-201ENST00000279247 HOXB1P14653 301 aaPredicted RBP15.16■□□□□ 0.02
CAPN1-201ENST00000279247 AANATQ16613 207 aa15.16■□□□□ 0.02
CAPN1-201ENST00000279247 SPRNQ5BIV9 151 aa15.16■□□□□ 0.02
CAPN1-201ENST00000279247 GFRALQ6UXV0 394 aa15.16■□□□□ 0.02
CAPN1-201ENST00000279247 LDLRAD3Q86YD5 345 aa15.16■□□□□ 0.02
CAPN1-201ENST00000279247 PDZD9Q8IXQ8 264 aa15.16■□□□□ 0.02
CAPN1-201ENST00000279247 SPERTQ8NA61 448 aa15.16■□□□□ 0.02
CAPN1-201ENST00000279247 TMED6Q8WW62 240 aa15.16■□□□□ 0.02
CAPN1-201ENST00000279247 PLPPR2Q96GM1 343 aa15.16■□□□□ 0.02
CAPN1-201ENST00000279247 ABCA4P78363 2273 aa15.16■□□□□ 0.02
CAPN1-201ENST00000279247 SNTB1Q13884 538 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms