RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 SUMO3P55854 103 aaPredicted RBP11.12□□□□□ -0.63
COL8A1-202ENST00000273342 RTP5Q14D33 572 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 TESK1Q15569 626 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 C9orf135Q5VTT2 229 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 ZNF787Q6DD87 383 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 PRR18Q8N4B5 295 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 OR1K1Q8NGR3 316 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 ANGPTL4Q9BY76 406 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 DEFB126Q9BYW3 111 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 A0A087WWC5 75 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 TRAV39A0A0B4J263 110 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 TNFSF11O14788 317 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 IGLV3-1P01715 115 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 METTL15P1P0C7V9 234 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 DTYMKP23919 212 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 RPS16P62249 146 aaKnown RBP11.12□□□□□ -0.63
COL8A1-202ENST00000273342 OR8G1Q15617 311 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 FAM90A2PQ658T7 463 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 TMEM37Q8WXS4 190 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 RPUSD4Q96CM3 377 aaKnown RBP11.12□□□□□ -0.63
COL8A1-202ENST00000273342 GPR27Q9NS67 375 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 LAMP3Q9UQV4 416 aa11.12□□□□□ -0.63
COL8A1-202ENST00000273342 LMO7DNF2Z398 122 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 CCL2P13500 99 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 ZNF16P17020 682 aaPredicted RBP11.11□□□□□ -0.63
COL8A1-202ENST00000273342 ZNF92Q03936 586 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 P2RY6Q15077 328 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 ZNF664Q8N3J9 261 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 OR4X1Q8NH49 305 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 RASL10BQ96S79 203 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 PLK3Q9H4B4 646 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 MTCH2Q9Y6C9 303 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 PDCD6O75340 191 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 ZNF32P17041 273 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 BMP5P22003 454 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 COL10A1Q03692 680 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 ZNF611Q8N823 705 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 FGFBP3Q8TAT2 258 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 IL1F10Q8WWZ1 152 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 GPR87Q9BY21 358 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 A0A1B0GW64 132 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 GALR2O43603 387 aaPredicted RBP11.11□□□□□ -0.63
COL8A1-202ENST00000273342 CDS2O95674 445 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 IFNA10P01566 189 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 TAS2R60P59551 318 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 KCNMB1Q16558 191 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 SLC35E3Q7Z769 313 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 EXTL1Q92935 676 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 GNPNAT1Q96EK6 184 aaPredicted RBP11.11□□□□□ -0.63
COL8A1-202ENST00000273342 AURKAIP1Q9NWT8 199 aaPredicted RBP11.11□□□□□ -0.63
COL8A1-202ENST00000273342 R4GN57 208 aa11.11□□□□□ -0.63
COL8A1-202ENST00000273342 LOC102723971A0A1B0GUV8 181 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 CA11O75493 328 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 IFNA5P01569 189 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 GZMBP10144 247 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 NTF4P34130 210 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 HNRNPKP61978 463 aaKnown RBP eCLIP11.1□□□□□ -0.63
COL8A1-202ENST00000273342 CNN3Q15417 329 aaKnown RBP11.1□□□□□ -0.63
COL8A1-202ENST00000273342 M1APQ8TC57 530 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 SIGLEC12Q96PQ1 595 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 ELOVL1Q9BW60 279 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 SIRT7Q9NRC8 400 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 ELOA3CA0A087WX78 387 aaPredicted RBP11.1□□□□□ -0.63
COL8A1-202ENST00000273342 IGHV1OR15-9A0A0B4J2B8 117 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.1□□□□□ -0.63
COL8A1-202ENST00000273342 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.1□□□□□ -0.63
COL8A1-202ENST00000273342 A0A1W2PPQ1 181 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 C9J4A7 227 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 BCAT2O15382 392 aaPredicted RBP11.1□□□□□ -0.63
COL8A1-202ENST00000273342 ZFAND5O76080 213 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 AMBPP02760 352 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 TK1P04183 234 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 IGFBP7Q16270 282 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 HLA-BQ31612 363 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 SPSB1Q96BD6 273 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 IER2Q9BTL4 223 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 C11orf1Q9H5F2 150 aa11.1□□□□□ -0.63
COL8A1-202ENST00000273342 XKRY2A2RUG3 117 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 TCAPO15273 167 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 CNOT4O95628 575 aaKnown RBP11.09□□□□□ -0.63
COL8A1-202ENST00000273342 CTSSP25774 331 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 IDH3GP51553 393 aaPredicted RBP11.09□□□□□ -0.63
COL8A1-202ENST00000273342 PAX9P55771 341 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 TAS2R30P59541 319 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 ZNF726P1Q15940 193 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 ZNF66Q6ZN08 573 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 CDCA3Q99618 268 aaPredicted RBP11.09□□□□□ -0.63
COL8A1-202ENST00000273342 ATP5SQ99766 215 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 RBKSQ9H477 322 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 SMDT1Q9H4I9 107 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 A0A1B0GU03 582 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 ZNF732B4DXR9 585 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 EREGO14944 169 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 SCRG1O75711 98 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 DEFA4P12838 97 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 SLC23A3Q6PIS1 610 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 MAML2Q8IZL2 1156 aaPredicted RBP11.09□□□□□ -0.63
COL8A1-202ENST00000273342 OR5L2Q8NGL0 311 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 SCGB1C1Q8TD33 95 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 RBMXL1Q96E39 390 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms