RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 SHHQ15465 462 aa7.78□□□□□ -1.16
CTDSPL-201ENST00000273179 C9orf153Q5TBE3 101 aa7.78□□□□□ -1.16
CTDSPL-201ENST00000273179 RBMXL3Q8N7X1 1067 aaKnown RBP7.78□□□□□ -1.16
CTDSPL-201ENST00000273179 PLPPR1Q8TBJ4 325 aa7.78□□□□□ -1.16
CTDSPL-201ENST00000273179 PIGCQ92535 297 aa7.78□□□□□ -1.16
CTDSPL-201ENST00000273179 ZG16BQ96DA0 208 aa7.78□□□□□ -1.16
CTDSPL-201ENST00000273179 BPIFA1Q9NP55 256 aa7.78□□□□□ -1.16
CTDSPL-201ENST00000273179 CACFD1Q9UGQ2 172 aa7.78□□□□□ -1.16
CTDSPL-201ENST00000273179 FUT9Q9Y231 359 aa7.78□□□□□ -1.16
CTDSPL-201ENST00000273179 UNC80Q8N2C7 3258 aa7.78□□□□□ -1.16
CTDSPL-201ENST00000273179 HOXB9P17482 250 aaPredicted RBP7.78□□□□□ -1.16
CTDSPL-201ENST00000273179 ZNF880Q6PDB4 577 aa7.78□□□□□ -1.16
CTDSPL-201ENST00000273179 OR10AG1Q8NH19 301 aa7.78□□□□□ -1.16
CTDSPL-201ENST00000273179 CD99L2Q8TCZ2 262 aa7.78□□□□□ -1.16
CTDSPL-201ENST00000273179 SCGB1C1Q8TD33 95 aa7.78□□□□□ -1.16
CTDSPL-201ENST00000273179 CXorf36Q9H7Y0 433 aa7.78□□□□□ -1.16
CTDSPL-201ENST00000273179 MMP17Q9ULZ9 603 aa7.78□□□□□ -1.16
CTDSPL-201ENST00000273179 HEBP2Q9Y5Z4 205 aa7.78□□□□□ -1.16
CTDSPL-201ENST00000273179 MYBPHLA2RUH7 354 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 HCRTO43612 131 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 KLF7O75840 302 aaPredicted RBP7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 DXOO77932 396 aaKnown RBP7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 HRASP01112 189 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 KRASP01116 189 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 PRSS56P0CW18 603 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 LIMS3P0CW19 117 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 LIMS4P0CW20 117 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 CLEC12BQ2HXU8 276 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 TBC1D28Q2M2D7 210 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 HES3Q5TGS1 186 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 CBLN3Q6UW01 205 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 SLC25A26Q70HW3 274 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 CLEC4CQ8WTT0 213 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 SARAFQ96BY9 339 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 FBXL15Q9H469 300 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 NOX4Q9NPH5 578 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 NAT8BQ9UHF3 227 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 IFITM10A6NMD0 228 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 GSTZ1O43708 216 aaPredicted RBP7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 DKK1O94907 266 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 GAPDHP04406 335 aaKnown RBP7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 HIST1H1DP16402 221 aaKnown RBP7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 EGR1P18146 543 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 SDHBP21912 280 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 GATA3P23771 443 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 OR1D5P58170 312 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 RPS23P62266 143 aaKnown RBP7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 ZXDAP98168 799 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 ZXDBP98169 803 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 FABP5Q01469 135 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 RAB6CQ53S08 254 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 TMEM42Q69YG0 159 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 ZNF429Q86V71 674 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 IL22RA1Q8N6P7 574 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 RAB37Q96AX2 223 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 TM4SF18Q96CE8 201 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 DNAJA3Q96EY1 480 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 PARP12Q9H0J9 701 aaKnown RBP7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 RAB6CQ9H0N0 254 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 GP6Q9HCN6 339 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 C20orf141Q9NUB4 165 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 GNG12Q9UBI6 72 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 TIMM10BQ9Y5J6 103 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 ZNFX1Q9P2E3 1918 aaKnown RBP7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 TRBV20-1A0A075B6N2 111 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 TRGV10A0A0A0MS01 117 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 CXorf49A8MYA2 514 aaPredicted RBP7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 CHST1O43916 411 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 CATP04040 527 aaKnown RBP7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 APODP05090 189 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 IRF1P10914 325 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 RPL13AP40429 203 aaKnown RBP7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 CTSOP43234 321 aaPredicted RBP7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 EDDM3AQ14507 147 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 DGAT2L7PQ6IED9 249 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 SBSNQ6UWP8 590 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 SPNS2Q8IVW8 549 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 D2HGDHQ8N465 521 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 KRTCAP2Q8N6L1 136 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 NAT6Q93015 286 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 WBP1Q96G27 269 aa7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 GATA5Q9BWX5 397 aaPredicted RBP7.77□□□□□ -1.17
CTDSPL-201ENST00000273179 OR2H2O95918 312 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 APOOLQ6UXV4 268 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 ZNF611Q8N823 705 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 OR52P1PQ8NH57 321 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 GGTLC1Q9BX51 225 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 SLC25A39Q9BZJ4 359 aaPredicted RBP7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 DNAJC27Q9NZQ0 273 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 LOC102723996A0A087X1L8 192 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 A0A0U1RQV1 116 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 A0A1B0GW64 132 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 M0R082 166 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 NPIPB7O75200 414 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 MT-CO3P00414 261 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 CXorf66Q5JRM2 361 aaPredicted RBP7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 ZNF417Q8TAU3 575 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 PP6455Q8WZ26 134 aa7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 ZNF587Q96SQ5 575 aaPredicted RBP7.76□□□□□ -1.17
CTDSPL-201ENST00000273179 GSTO2Q9H4Y5 243 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms