RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 RNASEK-C17orf49H0YIS7 233 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 MMP23AO75900 390 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 MT-ND4P03905 459 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 EPHA1P21709 976 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 TMEM50BP56557 158 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 BLMHQ13867 455 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 MOGAT2Q3SYC2 334 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 SLC35E4Q6ICL7 350 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 HCP5Q6MZN7 132 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 ZNF782Q6ZMW2 699 aaPredicted RBP10.44□□□□□ -0.74
SS18-202ENST00000269138 CLVS1Q8IUQ0 354 aaPredicted RBP10.44□□□□□ -0.74
SS18-202ENST00000269138 PNKDQ8N490 385 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 TEX29Q8N6K0 151 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 OR5H6Q8NGV6 325 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 LGALS14Q8TCE9 139 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 CCDC107Q8WV48 283 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 POM121Q96HA1 1249 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 ZNF714Q96N38 554 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 METTL8Q9H825 291 aaKnown RBP10.44□□□□□ -0.74
SS18-202ENST00000269138 ETAA1Q9NY74 926 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 UBE2J1Q9Y385 318 aaPredicted RBP10.44□□□□□ -0.74
SS18-202ENST00000269138 MXRA5Q9NR99 2828 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 NAV3Q8IVL0 2385 aa10.44□□□□□ -0.74
SS18-202ENST00000269138 TMEM30CPA0ZSE6 113 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 IL1AP01583 271 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 GLAP06280 429 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 CGB3P0DN86 165 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 CGB7P0DN87 165 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 GDNFP39905 211 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 GLP1RP43220 463 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 RANBP1P43487 201 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 PAX5Q02548 391 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 RBM39Q14498 530 aaKnown RBP10.43□□□□□ -0.74
SS18-202ENST00000269138 C17orf58Q2M2W7 97 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 PRAMEF5Q5TYX0 476 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 BAIAP2L2Q6UXY1 529 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 ZNF497Q6ZNH5 498 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 NDNFQ8TB73 568 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 MRGPRDQ8TDS7 321 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 NCOR1P1Q9H4R4 102 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 UNKLQ9H9P5 680 aaKnown RBP10.43□□□□□ -0.74
SS18-202ENST00000269138 IGHV1-69DA0A0B4J2H0 117 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 IGHV1-69P01742 117 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 IGHV1-8P0DP01 117 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 RAB6AP20340 208 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 OMGP23515 440 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 COX7A1P24310 79 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 PLAC9Q5JTB6 97 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 UTF1Q5T230 341 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 GPR157Q5UAW9 335 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 OLFML2AQ68BL7 652 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 C5orf24Q7Z6I8 188 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 OR4K15Q8NH41 348 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 ARHGAP5-AS1Q96IT6 56 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 PECRQ9BY49 303 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 PLEKHJ1Q9NW61 149 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 TAS2R3Q9NYW6 316 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 OR6C3Q9NZP0 311 aa10.43□□□□□ -0.74
SS18-202ENST00000269138 ZFHX3Q15911 3703 aa10.42□□□□□ -0.74
SS18-202ENST00000269138 DSCAML1Q8TD84 2053 aa10.42□□□□□ -0.74
SS18-202ENST00000269138 H3BUI4 141 aa10.42□□□□□ -0.74
SS18-202ENST00000269138 RAB27BO00194 218 aa10.42□□□□□ -0.74
SS18-202ENST00000269138 CDK2P24941 298 aa10.42□□□□□ -0.74
SS18-202ENST00000269138 Q6ZTK2 550 aa10.42□□□□□ -0.74
SS18-202ENST00000269138 PRIMA1Q86XR5 153 aa10.42□□□□□ -0.74
SS18-202ENST00000269138 GAPTQ8N292 157 aa10.42□□□□□ -0.74
SS18-202ENST00000269138 PIP4P2Q8N4L2 257 aa10.42□□□□□ -0.74
SS18-202ENST00000269138 OR56B1Q8NGI3 324 aa10.42□□□□□ -0.74
SS18-202ENST00000269138 RFESDQ8TAC1 157 aa10.42□□□□□ -0.74
SS18-202ENST00000269138 UBALD1Q8TB05 177 aa10.42□□□□□ -0.74
SS18-202ENST00000269138 PTX4Q96A99 478 aa10.42□□□□□ -0.74
SS18-202ENST00000269138 SLC25A46Q96AG3 418 aa10.42□□□□□ -0.74
SS18-202ENST00000269138 SLC6A7Q99884 636 aa10.42□□□□□ -0.74
SS18-202ENST00000269138 MS4A7Q9GZW8 240 aaPredicted RBP10.42□□□□□ -0.74
SS18-202ENST00000269138 ATG5Q9H1Y0 275 aa10.42□□□□□ -0.74
SS18-202ENST00000269138 CALYQ9NYX4 217 aa10.42□□□□□ -0.74
SS18-202ENST00000269138 AK3Q9UIJ7 227 aa10.42□□□□□ -0.74
SS18-202ENST00000269138 KIAA2026Q5HYC2 2103 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 KBTBD11-OT1A0A1B0GTJ5 212 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 MDFIC2A0A1B0GVS7 189 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 hCG_1809904A0A1W2PP81 198 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 A0A1W2PPE2 198 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 A0A1W2PR64 198 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 A0A1W2PRV1 198 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 FAM172BPA6NC97 362 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 ZNF729A6NN14 1252 aaPredicted RBP10.41□□□□□ -0.74
SS18-202ENST00000269138 CLPXO76031 633 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 RBP4P02753 201 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 RCC1P18754 421 aaPredicted RBP10.41□□□□□ -0.74
SS18-202ENST00000269138 SSTR5P35346 364 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 SPCS2Q15005 226 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 NCR3LG1Q68D85 454 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 HEPN1Q6WQI6 88 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 Q6ZPA2 131 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 ZNF565Q8N9K5 539 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 OR10R2Q8NGX6 335 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 MRPL30Q8TCC3 161 aaKnown RBP10.41□□□□□ -0.74
SS18-202ENST00000269138 SLC25A38Q96DW6 304 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 ZNF48Q96MX3 618 aaPredicted RBP10.41□□□□□ -0.74
SS18-202ENST00000269138 HDHD3Q9BSH5 251 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms