RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 UCP3P55916 312 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 HLA-DRB3P79483 266 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 PAX5Q02548 391 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 TESK1Q15569 626 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 TMEM128Q5BJH2 165 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 SLC35E4Q6ICL7 350 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 C12orf45Q8N5I9 185 aaPredicted RBP13.73□□□□□ -0.21
TPM1-201ENST00000267996 OR4A4PQ8NGN8 299 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 MOB3AQ96BX8 217 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 CABLES2Q9BTV7 478 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 ZNF436Q9C0F3 470 aaPredicted RBP13.73□□□□□ -0.21
TPM1-201ENST00000267996 FXYD6Q9H0Q3 95 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 MGAT4CQ9UBM8 478 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 ZNF222Q9UK12 451 aa13.73□□□□□ -0.21
TPM1-201ENST00000267996 B9A039 149 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 ZG16O60844 167 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 ZNF737O75373 536 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 HLA-AP01891 365 aaKnown RBP13.72□□□□□ -0.21
TPM1-201ENST00000267996 CTSDP07339 412 aaPredicted RBP13.72□□□□□ -0.21
TPM1-201ENST00000267996 TNFRSF1AP19438 455 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 COL10A1Q03692 680 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 ATXN7L3Q14CW9 347 aaPredicted RBP13.72□□□□□ -0.21
TPM1-201ENST00000267996 C5orf24Q7Z6I8 188 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 MITD1Q8WV92 249 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 TMPRSS13Q9BYE2 586 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 SLC23A1Q9UHI7 598 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 METRNQ9UJH8 293 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 PKDREJQ9NTG1 2253 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 SPTBN1Q01082 2364 aaKnown RBP13.72□□□□□ -0.21
TPM1-201ENST00000267996 TMEM30CPA0ZSE6 113 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 TUSC2O75896 110 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 OR2A4O95047 310 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 ZNF205O95201 554 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 DUS4LO95620 317 aaKnown RBP13.72□□□□□ -0.21
TPM1-201ENST00000267996 PGAM2P15259 253 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 RPS2P15880 293 aaKnown RBP13.72□□□□□ -0.21
TPM1-201ENST00000267996 AKR1C4P17516 323 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 GZMKP49863 264 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 BAMBIQ13145 260 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 C2orf68Q2NKX9 166 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 NOXA1Q86UR1 476 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 OR5T2Q8NGG2 359 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 OR11L1Q8NGX0 322 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 ZFAND1Q8TCF1 268 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 OR2A7Q96R45 310 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 SHARPINQ9H0F6 387 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 DLL4Q9NR61 685 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 PIPOXQ9P0Z9 390 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 PCDHB10Q9UN67 800 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 PPP1R3CQ9UQK1 317 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 CFAP46Q8IYW2 2715 aa13.72□□□□□ -0.21
TPM1-201ENST00000267996 NPIPB11E5RHQ5 1161 aa13.71□□□□□ -0.21
TPM1-201ENST00000267996 TFF1P04155 84 aa13.71□□□□□ -0.21
TPM1-201ENST00000267996 TK1P04183 234 aa13.71□□□□□ -0.21
TPM1-201ENST00000267996 HLA-GP17693 338 aa13.71□□□□□ -0.21
TPM1-201ENST00000267996 PI3P19957 117 aa13.71□□□□□ -0.21
TPM1-201ENST00000267996 AADACP22760 399 aa13.71□□□□□ -0.21
TPM1-201ENST00000267996 NKX2-5P52952 324 aaPredicted RBP13.71□□□□□ -0.21
TPM1-201ENST00000267996 SUPT4H1P63272 117 aaKnown RBP13.71□□□□□ -0.21
TPM1-201ENST00000267996 IL13RA1P78552 427 aa13.71□□□□□ -0.21
TPM1-201ENST00000267996 CCL8P80075 99 aa13.71□□□□□ -0.21
TPM1-201ENST00000267996 HMGN3Q15651 99 aa13.71□□□□□ -0.21
TPM1-201ENST00000267996 SWI5Q1ZZU3 235 aa13.71□□□□□ -0.21
TPM1-201ENST00000267996 ZNF672Q499Z4 452 aaPredicted RBP13.71□□□□□ -0.21
TPM1-201ENST00000267996 NLRC3Q7RTR2 1065 aa13.71□□□□□ -0.21
TPM1-201ENST00000267996 BOLLQ8N9W6 283 aaKnown RBP13.71□□□□□ -0.21
TPM1-201ENST00000267996 ANGPTL6Q8NI99 470 aa13.71□□□□□ -0.21
TPM1-201ENST00000267996 COQ2Q96H96 371 aa13.71□□□□□ -0.21
TPM1-201ENST00000267996 CNTNAP3BQ96NU0 1288 aa13.71□□□□□ -0.21
TPM1-201ENST00000267996 CNTNAP3Q9BZ76 1288 aa13.71□□□□□ -0.21
TPM1-201ENST00000267996 MS4A5Q9H3V2 200 aa13.71□□□□□ -0.21
TPM1-201ENST00000267996 CISD1Q9NZ45 108 aaKnown RBP13.71□□□□□ -0.21
TPM1-201ENST00000267996 DNAJB11Q9UBS4 358 aa13.71□□□□□ -0.21
TPM1-201ENST00000267996 C14orf166Q9Y224 244 aaKnown RBP13.71□□□□□ -0.21
TPM1-201ENST00000267996 ARFGEF3Q5TH69 2177 aa13.71□□□□□ -0.22
TPM1-201ENST00000267996 TRBV6-7A0A0A0MS04 114 aa13.7□□□□□ -0.22
TPM1-201ENST00000267996 SFT2D2O95562 160 aa13.7□□□□□ -0.22
TPM1-201ENST00000267996 DIRAS3O95661 229 aa13.7□□□□□ -0.22
TPM1-201ENST00000267996 PPYP01298 95 aa13.7□□□□□ -0.22
TPM1-201ENST00000267996 GIPP09681 153 aaPredicted RBP13.7□□□□□ -0.22
TPM1-201ENST00000267996 ZNF728P0DKX0 622 aa13.7□□□□□ -0.22
TPM1-201ENST00000267996 NFYAP23511 347 aaPredicted RBP13.7□□□□□ -0.22
TPM1-201ENST00000267996 SEC61A1P61619 476 aaKnown RBP13.7□□□□□ -0.22
TPM1-201ENST00000267996 ZCCHC24Q8N2G6 241 aaKnown RBP13.7□□□□□ -0.22
TPM1-201ENST00000267996 SNX22Q96L94 193 aa13.7□□□□□ -0.22
TPM1-201ENST00000267996 EGLN1Q9GZT9 426 aa13.7□□□□□ -0.22
TPM1-201ENST00000267996 TRAPPC2LQ9UL33 140 aa13.7□□□□□ -0.22
TPM1-201ENST00000267996 DYSFO75923 2080 aa13.7□□□□□ -0.22
TPM1-201ENST00000267996 IGHV3OR15-7A0A075B7D8 119 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 A0A0B4J2A0 478 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 SMLR1H3BR10 107 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 BET1O15155 118 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 CD34P28906 385 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 CD80P33681 288 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 TEX36Q5VZQ5 186 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 STUMQ69YW2 141 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 PIK3IP1Q96FE7 263 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 RSRP1Q9BUV0 290 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 SHPKQ9UHJ6 478 aa13.69□□□□□ -0.22
TPM1-201ENST00000267996 KIF25Q9UIL4 384 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms