RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 UBE2L5PA0A1B0GUS4 154 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF729A6NN14 1252 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 FGF16O43320 207 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 NDUFA2O43678 99 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 CDS2O95674 445 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 IGHV3-9P01782 118 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 MMP7P09237 267 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 FBP1P09467 338 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 PPP1CCP36873 323 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 PPP1CBP62140 327 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 SHISA5Q8N114 240 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 DMBX1Q8NFW5 382 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 FGF11Q92914 225 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 MUCL1Q96DR8 90 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 HEYLQ9NQ87 328 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 TRAPPC1Q9Y5R8 145 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF814B7Z6K7 855 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 H3BMH7 237 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 DEGS1O15121 323 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 MELTFP08582 738 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 FHITP49789 147 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 PCOLCEQ15113 449 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 BTNL8Q6UX41 500 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 SMIM8Q96KF7 97 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 ESRP2Q9H6T0 727 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 PARD6AQ9NPB6 346 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 LOC102723996A0A087X1L8 192 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 PRR33A8MZF0 331 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF737O75373 536 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 MBPP02686 304 aaPredicted RBP10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 HEXAP06865 529 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 KLK2P20151 261 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 TEX30Q5JUR7 227 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 SIGLECL1Q8N7X8 197 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 SLC35G3Q8N808 338 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 POC1AQ8NBT0 407 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 APCDD1LQ8NCL9 501 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF439Q8NDP4 499 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 FAM173AQ9BQD7 235 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 HDHD3Q9BSH5 251 aaPredicted RBP10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 NOSIPQ9Y314 301 aaKnown RBP10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 HS3ST3B1Q9Y662 390 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 A0A1B0GV90 55 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 PRR32B1ATL7 298 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 H0YL77 283 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 MPPED1O15442 326 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 CHST1O43916 411 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF708P17019 499 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 SRD5A2P31213 254 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 HIST1H3AP68431 136 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 HABP2Q14520 560 aaPredicted RBP10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 KHDC3LQ587J8 217 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 NFAM1Q8NET5 270 aaPredicted RBP10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 ADGRG7Q96K78 797 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 NKX2-6A6NCS4 301 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 FAM166BA8MTA8 275 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 F6UZH7 168 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 DANCRP0C864 163 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 B4GALT1P15291 398 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 RAB4AP20338 218 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 MDKP21741 143 aaPredicted RBP10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 VDAC1P21796 283 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 RANP62826 216 aaKnown RBP10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF154Q13106 437 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 LIN7CQ9NUP9 197 aaKnown RBP10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 COA4Q9NYJ1 87 aa10.06□□□□□ -0.8
CLSTN3-201ENST00000266546 TPPP2P59282 170 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF92Q03936 586 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF385CQ66K41 422 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 VHLLQ6RSH7 139 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 OR4A4PQ8NGN8 299 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 OR2T10Q8NGZ9 312 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 ATP5SQ99766 215 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 VAMP8Q9BV40 100 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 RIMS4Q9H426 269 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 NAT8Q9UHE5 227 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 PRSS50Q9UI38 385 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 ATG2AQ2TAZ0 1938 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 NXPH2O95156 264 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF25P17030 456 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 HLA-GP17693 338 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 HNF1AP20823 631 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 PRSS12P56730 875 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 H2BFWTQ7Z2G1 175 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 FAM58AQ8N1B3 248 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 FAM103A1Q9BTL3 118 aaKnown RBP10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 DYNLRB1Q9NP97 96 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 CENPFP49454 3210 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 C17orf51A8MQB3 221 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 LYPD3O95274 346 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 PPYP01298 95 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 PTGER4P35408 488 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 CHRNA7P36544 502 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 CLN3Q13286 438 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 LTC4SQ16873 150 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF880Q6PDB4 577 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 TBC1D26Q86UD7 250 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 ADPRHL1Q8NDY3 354 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 CTDSP1Q9GZU7 261 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 Q9N2K0 584 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms